Oncorhynchus mykiss (rainbow trout): 110499114
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Entry
110499114 CDS
T07259
Name
(RefSeq) thyroid hormone receptor alpha-like
KO
K05547
thyroid hormone receptor alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110499114
04081 Hormone signaling
110499114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110499114
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110499114
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110499114
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
110499114
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
110499114
NCBI-ProteinID:
XP_021431704
Ensembl:
ENSOMYG00000020950
UniProt:
A0A8C7VUZ1
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All DBs
Position
20:20654464..20688063
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AA seq
414 aa
AA seq
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MHILHSHCVIRWIDGPKRKRKNSSCSVKSMSEMNGYGQTGSESTGYIPSYLEKDEPCVVC
GDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFKKCI
AVGMAMDLVLDDSKRVAKRRLIEENREKRKKEEMVKTLQNRPEPTGSEWELIRMLTEAHR
HTNAQGSHWKQKRKFLPEDIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKL
PMFSGLPCEDQIILLKGCCMEIMSLRAAVRYDEESETLTLSGEMAVKREQLKNGGLGVVS
DAIFDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTSSDKIEKCQETYLLAFEHYINYR
KHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcatattctacactcgcactgcgtcataaggtggatcgatggcccgaaaaggaaaaga
aagaacagttcatgttctgtgaagagcatgtctgaaatgaatggatacggacagactggg
tcagagagtacagggtacatccccagctacctggagaaggatgaaccgtgcgtggtgtgt
ggagacaaggccactggctaccactaccgctgcatcacctgtgagggctgcaagggtttc
tttcggcggacaattcagaagaacctccaccccgcctactcctgtaagtacgatggctgc
tgcatcatcgacaagatcacccgcaaccagtgccagctgtgccgcttcaagaagtgcatc
gcagtgggcatggccatggacctcgtcctggatgactctaagcgggtggccaagcggcgt
ctgatcgaggagaaccgggagaagaggaagaaggaggagatggtgaagactctgcagaac
cggccggagcccaccggctcagagtgggagctgatccgcatgctgaccgaggcccaccgc
cacaccaatgcacagggctcccactggaaacagaaacgcaagttcctgccagaggacata
ggtcagtctcccgtggcccccacgtcggacggagacaaggtggacctggaggccttcagt
gagttcaccaagattatcacccctgccatcacccgcgttgtcgactttgccaaaaaactt
cccatgttctcggggctgccttgtgaggaccagatcatcctattaaaaggctgctgtatg
gagatcatgtcgctgcgcgctgccgtgcgctatgacgaagagagcgagacgctgaccctg
agcggcgagatggcggtcaagcgggagcagttgaagaacggcggcttgggcgtggtgtcg
gacgccatcttcgacctgggcaagagcctggcgcagttcaatctggacgacacggaggtg
gcgctgctgcaggctgtgctgctcatgagctcagaccgctcgggcctcacgagcagtgac
aagatcgagaagtgccaggagacctacctgctggcgtttgaacactacataaactaccgc
aaacacaacattccccacttctggcccaagctgctgatgaaggtgacggacctgcgtatg
atcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgcccaactgaactt
ttccccccgctcttcctggaggtcttcgaggaccaggaagtgtga
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