Oncorhynchus mykiss (rainbow trout): 110499200
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Entry
110499200 CDS
T07259
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03430
Mismatch repair
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110499200 (pms2)
03460 Fanconi anemia pathway
110499200 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110499200 (pms2)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110499200 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110499200
NCBI-ProteinID:
XP_021431849
Ensembl:
ENSOMYG00000035947
UniProt:
A0A8C7T7B9
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All DBs
Position
20:complement(23353584..23363508)
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AA seq
891 aa
AA seq
DB search
MTALRDDVATGPYCSSEPAGIIKAIDRHSVHQICSGQVVLTLATAVKELVENSIDAGATN
VDIKLKDSGTELVEVSDNGKGVEEANFEGLTLKHHTSKLKDFSDLIHVETFGFRGEALSS
LCALSDLSVVTCHEAAQVGTKLVFDHNGHLTQQLPHPRQQGTTVSLSQLFYTLPVRHKEF
QRNIKKEYTKMIHILQSYCIVSTGVRITCTNQTGQGKRTPVLCTSGRQSMRDNIGAIFGP
KQLQSLLLFQQLSPTDNIKEDYGLSNADLPKDLFAISGFVSRGDHGVGRSATDRQFFYIN
NRPCDPSKVSKVVNEVYHTFNRHQYPFVALNITVASECVDVNVTPDKRQIFLQEEKLLLA
IMKSSLIAMYETGVNKISLNHMSFSTTSKHTLQDTYRPAEPPSDMEGCQVPSSETAPEAG
DDSESVIPSPQSSLNLAGLKAAFSMHNSPGSGSKSSTAKAANTGPTQKKLQSFFGGSDKS
QNTHGPSLQSPLKTSRGAVKCSPVRRSVLEGFRYGRTTESDVDSGRESVLSEHSSPTATP
ESLYATIGSEFNSPDITVDDEPIIKSEALNEPFNEERTVAKHFDRPIEPLSEMSEEMSFS
PNAKKAKLEDGQFSLEYKTTHSAGSEGSSGSNVDAPVCVQKRTVPLQFSVQELFGRVRRL
QEQRREKAEDRLRYRRFRAKISPGENQSAEDELKKEICKDSFKDMEIIGQFNLGFIITKL
NSDIFMIDQHATDEKYNFEMLQQHTALQGQRLIVPQNLHLTAVSENVLVENLEIFRKNGF
DFLIDEEAQVMERVKLVSLPTSKNWTFGPGDIEELIFMLSDSPGVMCRPSRVRQMFASRA
CRKSVMIGTALSTSEMKKLVVHMGEIEQPWNCPHGRPTMRHLANLNIISED
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgactgctctgagagatgacgtcgcaactggaccctattgcagctctgaaccagctgga
ataatcaaggccattgacaggcactctgtgcatcagatctgctctggacaagttgtgttg
accctggctacagctgtcaaggaactggttgaaaacagtattgatgcaggggccaccaat
gttgacattaaattgaaggacagcggaacagagcttgtggaagtgtctgacaacggcaaa
ggagtggaagaggctaattttgaaggactaaccttgaagcaccacacatcgaagctgaag
gatttctctgaccttatccacgtggaaacatttggcttccgaggggaagccctcagctct
ctttgtgccctcagtgacctcagtgttgtgacctgtcatgaggctgcacaggtgggcacc
aagctggtgtttgaccacaacggtcacctgacccaacagttgccccaccccaggcagcag
ggcaccacggtcagcctgtcgcagctcttctacaccctgcctgtccgacacaaggagttc
caacgtaacattaaaaaggaatacaccaagatgattcacatcctccagtcctactgcatc
gtctcaacaggggttcgtatcacctgcaccaaccagacgggacagggcaaacgcaccccg
gtcctctgcaccagcggcaggcagagcatgagagacaacattggagccatatttggcccc
aaacagttgcagagtctgcttctattccagcagctctcgccaacagacaacatcaaggag
gattatggactgagtaatgcagacctacccaaagacctcttcgcaatctccggttttgtg
tcgcgaggggatcatggtgtcgggagaagtgccacagacagacagttcttttacatcaac
aaccgcccgtgtgatccttctaaggtctccaaggttgtgaatgaagtgtatcacaccttt
aacagacatcagtatccgtttgttgcattgaacatcactgttgcctcagagtgtgtggat
gtgaacgtcacgccagacaagcgtcagatcttcctccaggaggagaaactcctgctagcc
atcatgaagagctctctcatcgccatgtacgagactggggtcaacaagatcagcctcaac
cacatgtccttctccaccaccagtaaacacactttacaagatacctacagaccagcagag
cctccatcggatatggaaggatgccaggttccatcatctgagacggctcctgaagctgga
gatgattcagaatctgttataccaagcccccagtcttctctcaacttggctggattgaag
gctgctttctccatgcacaacagcccaggcagtgggtccaagtcgagcactgctaaagct
gctaacactggtccaacccagaagaaactgcagtctttcttcggaggctctgacaagagt
cagaacacacacgggccaagtttacaatctcctttgaaaaccagtcgaggtgcagtgaaa
tgttcccctgtgaggaggtctgtgctggaggggttcaggtatggaaggacgacggagagc
gacgtagactctggcagagagagcgtcctgtcggagcacagctcccccacagccacccca
gagagtctctatgctactatagggtcagagttcaactcaccagacatcacagtagatgac
gaacccattataaaaagcgaggcactcaatgaacctttcaacgaggaacgcacagttgct
aagcactttgaccggccgattgaaccactttcagagatgtctgaggaaatgagcttcagt
cccaacgccaagaaggccaaactagaggatggtcagttctccttagagtacaagaccaca
cattcagccggttctgaaggatcctctgggtctaatgtggacgcaccagtctgtgtacag
aagaggacagtgccactgcagttctctgtacaggagctgtttgggagggtgagaaggctt
caggaacagcgtagagagaaggctgaagacaggctgcgctacagacgcttcagagccaaa
atcagccctggagagaatcagagtgctgaggatgagctgaagaaagagatatgcaaagac
agttttaaggacatggagataatcgggcagtttaacctgggcttcatcataactaagctc
aactctgacatcttcatgatagaccagcatgccaccgacgagaagtacaactttgaaatg
cttcaacaacacactgcactgcaaggacagagactcattgttccacagaatctccacctc
acagcagtcagcgagaacgttctcgtggagaaccttgagatcttcagaaagaatggtttt
gattttctcatagatgaggaggcccaggtgatggagcgggtgaagctggtgtccctgcca
accagtaagaactggacatttggtccgggggacatcgaggagctcatctttatgttgagt
gacagcccaggggtcatgtgtcggccgtctcgtgtcaggcagatgttcgcctccagggcc
tgcaggaagtcggtgatgatcggtactgctctgagcaccagtgagatgaagaagcttgtg
gttcatatgggggagatagagcagccttggaactgtccacatggcagacccactatgaga
caccttgcaaacttgaacatcatctcagaagactga
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