Oncorhynchus mykiss (rainbow trout): 110499228
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Entry
110499228 CDS
T07259
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110499228
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110499228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
PGA2
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
110499228
NCBI-ProteinID:
XP_021431904
Ensembl:
ENSOMYG00000008919
LinkDB
All DBs
Position
2:complement(89205876..89208585)
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AA seq
446 aa
AA seq
DB search
MAYPQGFLFQPSVSLALHSCPPFSSSVILGRPRTDEMGRPSTGSAFAPYAGSPAFNGTSP
GFNSYLQYSGEQRAAMNSFVGSAYDPSAGITGSLEYHPFGGALGPYPYGDPAYRKNATRD
ATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWNPRN
RSEDEEEDDNIDLEKNDDDDEPLKPTAEIGLKNEDGHHPHPVGISREKEDNSSNDMEPVL
TDPDLKDHGDRRVPEMLGPTTTASPQNVHLGAERDSDSADTTSPPAPRRNDTGNSSNATS
VIDSPLPAPKPKLWSLAEIATSSDKCKGCSDGAQIVSRQLRTEIPASVSSPPRAAAQNHF
PHSAALSRHVYYTSPFFQGYSNYHGAFGQLHSPGSNVGSATHLNGLHQTMLHRAEALARD
SKARSQTQIDLCKDLRYELKKGMTHV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcaaggctttctcttccaaccgtcggtttctctggctctccattcctgt
cccccgttcagttccagtgtgattttaggaagaccgaggacagatgaaatgggccggcca
tctacaggctcagccttcgcgccgtacgcgggatcaccggcgttcaatggcacgtcgcca
ggcttcaactcttaccttcagtacagcggagagcagagggcggcaatgaactcgtttgtg
ggttccgcgtatgatccttcagccggcatcactggctctttagaatatcacccgtttggt
ggtgcattgggcccctatccatatggcgaccctgcatacaggaaaaatgctactcgggat
gcgacttccactctcaaagcgtggctcaatgaacatcgcaaaaacccttaccccaccaag
ggcgagaagatcatgctggcaatcatcaccaagatgacccttacccaagtgtccacctgg
ttcgctaacgccagaagacgtttgaagaaagagaacaaaatgacgtggaacccgaggaat
agaagtgaggatgaggaagaggatgacaacattgacctggagaagaatgacgacgacgac
gagccactcaagcccacagcagaaattgggttgaaaaatgaagatggacatcatccacat
ccagtgggaatctcccgtgagaaagaggacaatagcagcaatgatatggaacctgtctta
actgatccggatttaaaggaccacggggacaggagagtgcccgagatgctgggacccact
accacagcatctcctcaaaacgtacaccttggagcggagagggattcagactcggcggac
acgacaagtccacctgcaccgaggcgtaatgacacaggcaactccagcaatgccacgtca
gtgattgactcgccccttccagccccaaaacctaaactgtggtcgctggcggagattgca
acttcttcggacaaatgtaaaggatgtagcgatggtgcccagatcgtgtcccgacaattg
cgcacagagattccggccagtgtgtcatctccaccgcgagccgctgctcagaatcatttc
cctcacagcgcagccctttcaagacatgtctattatacatctccctttttccagggttac
tcaaactatcatggcgcttttggacagctgcacagccccggatccaacgtggggtcagcg
acacatttaaatggattacatcaaactatgttacacagagccgaggcactggcaagagat
agcaaagccaggagccaaacacagatagatctttgtaaagacttgagatatgaacttaag
aaaggtatgacacatgtttag
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