Oncorhynchus mykiss (rainbow trout): 110499275
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Entry
110499275 CDS
T07259
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110499275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110499275
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
110499275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA
AAA_29
DUF87
Zeta_toxin
AAA_25
RsgA_GTPase
nSTAND1
AAA_33
AAA_5
P-loop_TraG
NB-ARC
Motif
Other DBs
NCBI-GeneID:
110499275
NCBI-ProteinID:
XP_021431982
Ensembl:
ENSOMYG00000041161
LinkDB
All DBs
Position
20:complement(27103050..27110603)
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AA seq
717 aa
AA seq
DB search
MGLLLLQLSKCPGVNILKREVHSGVHKLFWLECQTSRGRREVSGKRFEPVARSSLSHPRR
CNSLVPCVPLRQFTIPPHLLRNSWTATVNFANYSSSTDSKQATQQEVDSKDLQSKETKQS
PTRIPTEDVKRILQLAHPERLRLSAAVGFLMVSSAVTMSAPFFLGQVIDTIYTSSSEDFS
ASLRSLCIMLSGVFLCGGAANAARVYLMQISGQQIVRNLRVFLFSSILRQEVGFFDKTRT
GELINRLSADTALIGRSVTDNLSDGLRAVAQATAGVSMMFYVSPSLAAFVLLIVPPMAGL
AVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKELTEVAKYTEKANYVLHLA
KQEAVLRAGFFGATGLSGNIIILSVLYKGGLLMASEHMTVGELSSFLMYAFWVGISIAGM
SSFYSELMKGFGAGARLWELLDRKPEFPLNEGIVLRPEQLKGQLEFQNVSFAYPTRKDAP
IFQDLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPVAGVITIDGHDVRDLNPYWLRS
HIGTVSQEPVLFSCSIAENIAYGAPDSGTVTVQEIHRAAQIANAYEFVRGFPKGFDTVVG
EKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRTVLII
AHRLSTIQNADAVAVLDQRRVVECGQHAQLLGNRQGLFRKLMEKQAFLQEGQKQALR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggactgttgctgttgcaattgtcaaaatgtccaggcgtgaatattttgaagcgcgag
gttcactccggtgtacataaactattttggttagaatgccagacgtccaggggacgacga
gaggtgagtgggaaaaggttcgaacctgtggcacgctcttcgctttcacacccgaggaga
tgcaactctcttgtgccctgtgtaccacttagacagttcaccatacccccccatttgttg
aggaactcatggacagcaactgtaaactttgccaactacagctcttcgacggactcaaaa
caagcaacacaacaagaagttgacagcaaagatctgcaatcaaaggaaacaaaacaatcc
ccaactcggatacccactgaggatgtcaaaaggattttacaacttgcccaccctgagcgc
ttgcgactgtcagcggctgtgggcttcctaatggtctccagcgctgtcacaatgtcggcg
cccttcttcctgggccaagtcattgacaccatctacaccagctcttcagaggacttcagt
gcctccctccgctctctgtgtatcatgctttcaggggtattcctttgtgggggcgccgct
aatgctgcccgtgtctacctcatgcaaatctcagggcaacagattgtgagaaatctacgt
gtattcctattctcctcgattctgaggcaggaggtaggtttctttgataagacccgtacc
ggggaactcattaaccgcctatctgcagacacggcactcatcggccgctccgtcacggac
aacctttctgacgggctccgcgctgtcgcccaggcaacagctggggtcagcatgatgttt
tacgtgtcaccaagtttagcagcctttgtgctgctgattgtgcctcctatggctggccta
gctgtcatatatgggagatacctgcgctccatatccaaacgtacacaggactctctggct
gaggccacacagttggcagaagaacgcatcagcaacatgaggacagttcgggcgtttggt
aaggagctgacagaggtggccaagtatacggagaaggccaactatgttctccacctggcc
aaacaggaagccgttttgagggctggcttctttggcgcgactggactcagtggcaacatc
atcatcctgtcagtgctgtataagggagggctattgatggccagtgaacacatgactgtg
ggagagctctcttccttcctcatgtacgccttctgggtgggcattagcattgcaggtatg
agctcgttctactctgaactgatgaagggctttggcgcaggggcacggctttgggagcta
ctggacaggaagcccgagttccccctcaatgagggtattgtgctgaggccagagcagctt
aagggtcaactggagttccagaatgtctcctttgcctacccaacccgcaaagacgccccc
atcttccaggacctgagtctctctgtgcctgctggctccgtcatggccgtggtagggccc
agcggatcgggcaaatccactctggtctccctgctgctcaggctctacgacccagttgca
ggtgtgatcactatcgacgggcatgatgtgagagatttgaatccttattggctgaggagt
cacattggaactgttagtcaggagcctgtactcttctcctgttccatcgctgagaacatt
gcctatggagcgcccgactctggcacggtcacagttcaggaaatccaccgggctgcacag
atcgccaacgcttatgagtttgtccgaggtttcccaaaaggctttgacactgtggtggga
gagaagggtgttcttctctcaggtggtcagaaacagagaattgctattgcaagggctctg
cttaagaaccccaagatacttctacttgatgaggcaacaagtgccctggatgcagagaat
gagttcctggtccaggaggctctagagcggctcatggatgggcgcacagtgctgatcatc
gcccaccgcctctccaccatccagaacgctgacgccgtggctgtgctggaccagcggcgt
gtggtggagtgtgggcagcatgcacagctcttgggcaaccgccaaggcctcttcaggaag
ctgatggagaaacaagccttccttcaagaggggcaaaagcaagcgttgcgttga
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