Oncorhynchus mykiss (rainbow trout): 110499321 Help Entry 110499321         CDS       T07259                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy03430   Mismatch repair Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     110499321 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:omy03400]     110499321 (msh6) DNA repair and recombination proteins [BR:omy03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      110499321 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  110499321 NCBI-ProteinID:  XP_021432075 Ensembl:  ENSOMYG00000029486 UniProt:  A0A8C7SF62 LinkDB All DBs Position 20:30025625..30060187 Genome browser AA seq 1387 aa AA seqDB search MAKQSSIFNFFNKSPPPVLKAKPSPSPAEADLPSSVRKKNSSPKEEAKHASQTPNTKKTP AKPLNAKASKGGFGKLFGNKTLTIKESPAPCPFSAGALVWAKLEGHPWWPCMVAPQPVGG QQLRGRGKSQRLHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRKAME LADAAMPDSPETRLKMPVCMDPSDAEEDDEEEDMELDKSTLTDEDLTEEEDEETVKSKPS RRSSRATAEQGSKSKRRRIVVASDSEGSGDEFKPEQAGCSSEEDEEEVVNSMSEEDVESE CEAEPDSPVKPVKRKRPIEKPSSAKPKPKTPTLPETAKRAPLSSTITADTKSRLSAFSAP ESFDSQANGSGAGGQGGATVWDHEKLDWLQEGRRKDAKRRRQSEEDYDPTTLYVPEDFLN KTTPGMRRWWQLKSETFDAVLFFKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEI GFGRFSDGLVQRGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVQREVCRIITRGTQTY SVLDGAPSETHSKYLLSIKEKAEEESSGRCRTYGVSFVDTSVGYFYVGQFQDDRHCSRLR TLLSHYTPAQVLFEKGNPSAETRKIFKASLSSAMQEGLTAGSQFWDAQKTLKTLAEEDYF KESVRKDEESGSSVLPSVLKSMTSESDSLGLTPKEGYELALSALGGCMFYLKKCLVDQEL LSMTNFQEYIPVDVEMEKAAGPTSFFSQTRQRMVLDGVTLANLEILQNVSGGTEGTLLER LDTCSTPFGKRLLKQWLCSPLCNPTSIGERLDALEDLMGVQAQATEVSDLLKKLPDLERL LSKIHSIGTPKGQDHPDSRAVLYEEVTYSKKKIVDFLSALEGFKTMQEIVTILGPVAVDF RSRLLRQVVNLKDDGQEGLFPDLSAELKRWDTAFDHQKARATGVITPKTGFDPEFDQALS GIKACERDLQDYLDRQKKRLGCRNLTYWGTGRNRFQMEVPDSVSERNIPEEYKVKSTKKG WKRYWTREIERLFSELQSLEEKRDAALKDCMRRLFYNFDKNYRDWQTGVECMAVLDVLLS LTRYSQGGDGGPMARPQVLLPGDISQSAAFLDLRGSRHPCVTKTFFGDDFIPNDIAIGCP GGEEEGQEDKGHAPCVLVTGPNMGGKSTLMRQCGLVVVLAQLGCYVPAESLSFTPVDRVF TRLGASDRIMAGESTFFVELSETASILHHGTKHSLVLLDELGRGTATYDGTAIASAVVNE LAKRICCRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENEGDEDPSQETITFLYKFIAGA CPKSYGFNAARLANLPEDVIQSGHRKAKEFERSTISLRVFKKLCLYAEDPTAASTQFALL LRMISNL NT seq 4164 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagcagcattttcaattttttcaataagtctccgccaccggttctgaag gcgaaaccgagtccctcgcctgcagaagccgacttgccatcctcagttcgaaaaaagaac agctctccaaaagaagaagctaagcatgcatctcaaactcccaacaccaaaaagactcct gcaaaaccccttaatgcaaaagcaagcaaaggcggattcggcaaactctttgggaataag acactaacaataaaggagagtccagcaccatgtccattcagtgccggagccttggtgtgg gccaagctagaggggcacccctggtggccgtgtatggtagctccccagcctgtcggcggg cagcagctgaggggtaggggtaaaagccagcgcctgcatgtccacttcttcgatgagcca ccgaccaggggctgggtcagcaccaaatatatccgcgagtatcaaggttcggacagcagt gatgctaagacaggaggggtgttcttcagtggtaagcctgtgatccgcaaggccatggag ctggctgatgctgctatgccagacagcccagagactagactgaagatgcctgtctgtatg gacccatctgatgctgaggaagatgacgaggaggaggatatggagcttgataagtcaaca ttgaccgacgaagatttgactgaagaggaagatgaggagacggtgaagtctaagcctagt cgccgttcctcccgtgccacagcagaacagggcagcaagtccaagcgtcgccgcatcgtg gttgcctccgacagtgaaggctcgggtgacgaattcaaaccagaacaggccggatgcagc agtgaggaagatgaggaagaggtagtgaacagtatgtcggaggaagatgtagaaagtgaa tgtgaggctgaacccgacagcccagttaaaccggtgaaacgcaaacgacccatagagaag ccatccagtgccaaaccaaaacccaagactcccactcttccagaaaccgccaagagagcc cccttatctagcaccatcacagccgacacaaagtctcgactctcagccttttcggccccg gagagcttcgacagccaggcgaatggctcaggtgccggcgggcaaggtggggctacggta tgggaccatgagaagcttgattggctacaggaaggccggaggaaagacgccaagagacgg agacagtctgaggaagactacgatcccacgactctgtatgtcccagaagacttcttgaac aaaacgaccccaggcatgcggcgctggtggcagctcaagtcggagacgttcgatgccgtg ctcttcttcaaggtgggtaagttctatgagctgtaccacatggatgctgtgattggtgtc aacgagctggggctgaccttcatgaagggggcctgggcccactctggcttccccgagata ggctttggacgcttctcagatggactggtgcagaggggatacaaggtggcacgtgtggag cagacggagactccagacatgatggaggctcgctgtaagaccatgctgaagcccaccaag tttgaccgggtggtacagcgtgaggtgtgccgaatcatcacacggggaacgcagacctac agcgtgttggacggagccccttctgagacacacagcaaatacctcctcagcatcaaggag aaggcagaggaggagagttcagggcgctgcaggacctatggggtcagcttcgtggacaca tctgtagggtacttctatgtgggccaattccaggacgaccgacactgctcccggctccgc accctgttgtctcactacacccctgcacaggtgctctttgagaaggggaacccttcagcc gaaacccggaaaatcttcaaggcttctttgtcctctgctatgcaggaggggctgactgca ggctcccagttctgggatgcacagaagaccctgaagaccctagctgaagaagactacttt aaagagagtgtgaggaaggatgaggagtctgggagcagtgttctcccctctgtcctcaaa tccatgacgtctgagagcgactcgttgggtctgacccctaaggaggggtatgagttggct ctgtcggccctgggaggctgtatgttctacttaaagaaatgtctggttgaccaggagctg ctgtccatgaccaacttccaggaatatatcccagtggacgtggagatggagaaggcagcc gggccgaccagtttcttctcccagacccgtcagcgtatggtcctggatggggtgacccta gccaacctggagatcctgcagaatgtgtcggggggtacagaggggaccttgttggaacgc ctggatacctgtagtactccatttggtaaaaggttgctgaagcagtggctctgttccccg ctctgtaaccccacatccataggggagcgcctggatgccctggaggacctgatgggagtg caggcccaggctacggaggtctcagacctgctcaagaagctccctgatctggagaggctc cttagtaagatccacagcatcggtactccgaagggtcaggaccacccagacagcagggct gttctgtatgaagaggtcacctacagtaagaaaaagattgtggacttcctctcggctctg gagggcttcaagaccatgcaggagattgtgaccatactaggaccggttgcggtcgacttc cggtccaggctgctgcgccaggtggtcaacctgaaggatgacggtcaggagggcctcttc cctgacctgtcggccgagctgaaacgctgggacacagccttcgaccaccagaaggcccgc gccaccggagtcatcacccctaagactggctttgacccagagtttgaccaggctctcagt ggcatcaaggcctgtgagagggacctacaggactacctggacaggcagaagaagaggctg ggctgcaggaacctgacctactgggggacgggacggaaccgctttcagatggaagtacca gacagtgtctcggagaggaacattcctgaggagtacaaggtgaagtccactaagaagggc tggaaacgctactggaccagggagatagagcgtctgttctcagagctccagagtcttgag gagaagagagacgcagctctgaaggactgcatgagaagactcttctacaactttgacaag aactatagggactggcagactggggtggagtgcatggctgtgctagatgtgttactgagt ctgacacggtacagccaggggggtgatggaggaccaatggcacggcctcaagtactactt cctggtgacatcagccaatcagcagccttcctggacttgaggggctcccgccacccctgt gtcaccaaaaccttcttcggtgatgacttcatccctaatgacattgctattgggtgccct ggcggcgaggaggagggccaggaggataaaggacatgcaccctgcgtgctggtcactggg cctaacatgggaggaaagtcgactcttatgagacagtgtggtctggtggtggtcttggcc cagttgggttgctatgttcctgctgagagcctgtcctttacccctgtggacagagtcttt acccggttgggagcatcggaccgtatcatggctggggagagcaccttctttgtagagctc agtgagactgcaagtatcctccaccatgggaccaagcactccctggtgctgctggatgaa ctgggaaggggcacagccacatatgacggcacagcgatagccagtgctgtggtgaacgag ctggcgaaaaggatctgctgtcggaccctcttctccacacattaccactccttagtagaa gactacaccaacaaccctgctgtacggctcggacacatggcctgtatggtggagaatgag ggagatgaggaccctagtcaggagacgatcaccttcctctacaagtttatcgcgggagct tgtcctaaaagctacggtttcaacgctgctcgcctcgccaacctgcctgaggatgttata caatcaggccacaggaaggccaaggagtttgagaggagcaccatttccctacgagtcttc aagaaactgtgtttgtatgctgaagaccccacagcagccagtacacagtttgccttgctc ctccggatgatcagcaacctgtga

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