KEGG   Oncorhynchus mykiss (rainbow trout): 110499572
Entry
110499572         CDS       T07259                                 
Name
(RefSeq) striatin isoform X1
  KO
K17608  striatin 1/3/4
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:omy01009]
    110499572
Protein phosphatases and associated proteins [BR:omy01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     110499572
SSDB
Motif
Pfam: WD40 Striatin WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_EML Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR75_2nd SOGA1-2-like_CC Prp19
Other DBs
NCBI-GeneID: 110499572
NCBI-ProteinID: XP_036812338
Ensembl: ENSOMYG00000009780
LinkDB
Position
20:complement(45500142..45560428)
AA seq 826 aa
MTAGCQKARDTENCQYTVVVTILPIEHRTFIWLGEQSHESATQKRRCHSVRAQAMDEQAG
PGVFFNNNSILSGGGKGLLPEGDAAEAARSPYSIPGILHFLQHEWARFDVEKVQWELQRA
ELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERSKYHKLKYGTELNQGDVKPPSY
DYDEVIENETPGSLNNQLSWKQGRQLLRQYLQEVGYADTILDVKSRRVQTLLCLAGDGGG
PVERTANGTDTRTRGGKTEQSESSVVQEAFRFIESSAADYSDEDDDEDGSGNDRTIMERT
GPTGTIVRKKPSSALSTSMDTSEDPDTEDALKGFDFLSSPDDMDTSPESRSAGNGTNWEE
EQQTAMSGAWDMDQGLISKLKEEYRKERKGKKVGQRPNRSKLQDMLANLRDQEDMNPREP
SSTSQSRSNAPRLNDHHQDNNTDEVEVLTVPPSSGKAFILGPDVNMEAELGLGELAGLTV
SNEADSLTYDMSNNKDALRRTWNPKFTLRSHFDGIRGLAFHPVEAVLVTASEDHTLKMWN
LQKTSPTKKNASVDVEPMHTFRAHQGAVLCVVMSSTGEQCFSGGLDGTIQSWNTPNPNLD
PYDSYEPSVLRGALCGHTDSVWGLVYSGVYQRLLSCSGDGTVRLWDASDTKPALVTFRSK
EFGVPSSVDVVSSDPAHMVTSFTSGQIGLFNMETQQLVLSLESAAETGTPCQINKVLSHP
TLPITITAEEDKHIKFYDNNTGKLVHSMVAHLDAVTSLAVDPNGLYLMSGSHDCSIRLWN
LETKTCVQEFTAHRKKNDESIHDVAFHPSKAYIASAGADALAKVFV
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgacagctggctgtcagaaagcccgagacacagagaactgtcagtatacggtagtagtt
actatccttccgattgaacatcgtacattcatttggcttggcgaacaatctcacgaatca
gcgacacaaaagaggcgctgtcactctgtccgtgcccaggccatggacgaacaggcaggg
cccggggttttcttcaacaacaactctatcttatcgggcggtgggaaaggactgctaccg
gagggcgacgcagcggaggcagccaggtcaccgtacagtatcccggggatcctacacttc
ctgcaacacgaatgggcccgcttcgacgtggagaaggtgcaatgggagttgcaacgcgcc
gaattacaggcccagatagccttcctgcagggagagaggaaaggacaggagaacctgaag
aaggatctcgtcaggaggattaagatgctggaatatgccctcaaacaggagaggtccaag
taccacaagttaaaatatggaacggagttgaaccaaggagacgtgaaacctcccagctat
gactacgacgaggtgattgagaatgagactcctgggtccttgaacaaccagttgtcctgg
aaacaaggccgtcagctcctcagacagtatctccaggaggtgggttacgcagacaccatc
ctggatgtgaagtctcgcagggtacaaaccctgctgtgtctggccggagacggagggggc
cctgtggagaggacggccaacggaacagacacccgcaccagaggagggaagacagagcaa
tctgagtccagtgttgtgcaggaggccttcaggttcatagaaagctctgcagctgactac
agtgatgaagatgatgatgaagacggttcagggaatgacaggactatcatggaacggaca
ggacctacagggacgatagtgaggaagaagccatcatctgccctgtccaccagtatggac
acaagtgaggacccagacactgaggatgcactgaagggctttgacttcctgtctagtcca
gatgatatggacacatcacctgagtcccgcagcgcagggaacgggaccaactgggaggag
gagcagcagactgccatgtcaggggcctgggacatggaccagggtctgatatccaaactc
aaagaggagtacaggaaggaacgcaaggggaaaaaagtagggcagagacctaaccggtct
aagctccaggacatgttggccaacctgagggaccaggaggacatgaatcccagagaaccc
tcctctacttcccagtcccgctccaacgcacccaggctcaacgaccaccaccaggacaac
aacactgatgaagtggaggtgttgacggtccctccttcctccgggaaggcctttatcctg
ggtcctgatgtgaacatggaggctgaactgggcctgggagagctagctggtcttactgta
tctaatgaggctgatagtctgacctatgatatgtccaacaacaaggatgccctgaggagg
acgtggaaccctaagtttaccctgcggagccactttgacgggatccgaggtctggcgttc
caccccgtagaagcggttctagtcaccgcctcagaggaccacacgctgaagatgtggaac
ctgcagaagacttcccccaccaagaagaatgcctctgtagatgtggaacccatgcacacg
ttcagggcccaccagggtgcagtgctgtgtgttgtgatgagcagtacaggagagcagtgt
ttcagtggagggctggacggcaccattcagagctggaacactccgaaccctaacctagac
ccatacgattcatacgagccgtctgtcctgcgtggggcgctgtgtggtcatactgactcg
gtgtggggtctggtgtacagtggtgtttatcagagactcctgtcttgctctggagacggc
accgtcaggctgtgggacgcctccgataccaagcctgccctggtcaccttccgcagtaaa
gagtttggcgtgccctcgtcagtggacgtggtctccagtgaccccgcccacatggtgaca
tctttcaccagcggtcagatcggcctgttcaacatggagacacagcaactggtgctcagc
ctggagtctgctgcggagacgggtaccccctgtcagatcaacaaggtgctgagtcacccc
accctccccatcaccatcaccgctgaggaggacaaacacatcaagttctacgacaacaac
acggggaagctggtccactcgatggtggcccacctggatgctgttaccagtctagctgtc
gaccccaatggtctctatctgatgtctggcagtcatgactgttctattcgtctgtggaac
ctagagactaagacgtgtgtccaggagtttacagctcacaggaagaagaatgatgagtct
atccatgacgtggccttccacccctctaaggcctacatcgcctccgccggggcagacgct
cttgccaaggtgttcgtatga

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