Oncorhynchus mykiss (rainbow trout): 110499744
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Entry
110499744 CDS
T07259
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110499744
Enzymes [BR:
omy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
110499744
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110499744
Prokaryotic type
110499744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
110499744
NCBI-ProteinID:
XP_036812815
UniProt:
A0A8K9V6H1
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Position
21:complement(12119840..12125727)
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AA seq
743 aa
AA seq
DB search
MTMKDEAPSVPECYISEHEGFYGTIKNFTRDFVVTEIDIHGQMVTKPSLSDVPQSSNITE
ACPGAKSEGKTNIISPKHQHNLKEENSEPGPGQNGDITSTASQDCFDLSIILGQAVCEEL
EQFTALLREMSSSPNEVVEKKLANQESSNGSEKKMANQELSLGSFPDKHQRANVHRAVRH
SFPFLLTVTNQSEIRVKEDPDFKLLSGLVSEEEAEDFIRFIDTKMPNSVYTFRSDDSKEH
RTAVHHFLSRRFGKLVETKSFSDQQQKTTAITVRLRERGKPRKRTADDSKEEEVYTAFTL
KKENLETLEAISYMAAVLGVLPSDFTYAGIKDKRAVTYQSMVVKKISPQRLREKASEFEK
RGVVLSSVRSVSEPLHLGRLQGNHFDLVVRDLRSHQGHGTLMELDSRVQEAVENVKVKGF
VNYYGPQRFGTGQSVQSDRIGLALLKEEMVAAVRLFFTPEEGDDPQSVAKRHFLQTDNAK
EALFLMPMSKARERMMLRALHRYGTGPEGCTRAWLSLPHGMRVFYPHAYCSRVWNEAAAH
RLTTLGHRARQGDLVWKQRREEGIEAGETSLPQIHVVTAAEEEEEVYSLGQVVLPMLGNT
VKYPENPVGGWYQERLARDGLQSCRFRVTPLKLNLPGCYRPLLAIPHSLTYRLEQGQRAG
ERQQEWNGKSQASGAVPQHPDTDTPRPGGLERQRGGESVQGNGEGESTVKYPDTDTPSLT
LNFDLDSSCYATVCLREVMKCDP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaggacgaagcaccgagtgtccctgagtgctacatctcagaacatgaaggg
ttctatggaaccatcaagaacttcaccagagactttgtagtcacagagatagacatccat
ggccagatggtcactaaacccagtttatctgatgttcctcaatcatccaacattactgag
gcatgcccaggtgccaagtctgaaggaaagacaaatattattagcccaaaacatcaacac
aacctcaaagaagagaattcagaacctggacccggtcagaatggtgacatcacatccacc
gccagccaagactgttttgacctgagcataatactgggtcaggctgtctgtgaagagcta
gagcagttcactgctttattgagagagatgtcatcaagtccaaatgaggtcgttgagaag
aagctggccaaccaagaatcatccaatggcagtgagaagaagatggccaatcaagagtta
tccctgggttcattcccagacaaacaccaaagggctaatgtccaccgcgctgtccgacac
agctttcccttcctgttgacagtaaccaaccaatcagagatcagggttaaggaggaccct
gactttaagctcctatcaggtttggtctcagaggaggaggccgaagactttatcaggttc
atcgacaccaagatgcctaattctgtgtacacattcaggagtgatgacagtaaggagcac
aggacggcagtgcaccacttcctcagtagacggtttggtaaactggtggagaccaagagc
ttcagtgaccagcagcagaagactacggccattactgtcaggttgagagaaagagggaaa
cccaggaagaggacggctgatgacagtaaagaggaagaggtctatacagcgttcactctg
aagaaggagaacctagagactctggaggctatcagctacatggcagctgtcctgggggtg
ctgccctctgacttcacctacgctggcattaaggacaagagggccgtcacctaccagtcc
atggtggtcaagaagatctcaccacaacggctgagagagaaggccagtgagtttgagaag
aggggcgtggtcctctcctccgtccgctccgtctctgagcctcttcatctgggtagactc
caggggaaccactttgacctagtggtacgggatctgaggtcacaccagggtcatggcaca
ctgatggagctggactcacgggtgcaggaggctgtggagaacgtaaaggtcaaggggttt
gtgaactactatggacctcagaggtttgggactggacagagtgttcagtctgaccgcatc
ggactggccctgctcaaagaggaaatggtggcagctgtccgtctgtttttcacaccagaa
gagggtgatgaccctcagagcgttgccaagagacacttcctccagactgataatgccaag
gaggccctgtttctgatgcccatgtccaaggccagagagaggatgatgctgagggcccta
catcgctatgggacgggcccagagggctgcacccgtgcctggctcagcctgccccatggg
atgagggtcttctacccccacgcatactgcagccgggtctggaacgaggcggctgcacac
aggctgaccacgctgggccacagggccaggcagggagatctggtctggaagcagaggaga
gaggaggggatagaggcgggagaaaccagcttacctcagattcatgttgttactgctgca
gaggaggaggaggaagtctactcactaggacaggtggttcttcccatgcttggcaacact
gtgaagtacccagagaaccctgtagggggctggtaccaggagagactggcgagggatgga
ctacagagctgtcgtttcagagtcactcctctcaaactgaacctccctggctgctaccgc
cccttactggccatcccacatagcctgacctacaggctggagcagggccagagagctggg
gagaggcaacaggagtggaatggaaagtcacaggctagtggagcggtaccacagcaccct
gacacagacacacctagacctggaggtctggagaggcagagaggaggggagagcgtgcag
ggtaatggagagggggagtcaacggtgaagtaccctgacacagacacacctagtttgacg
ttgaactttgacctggactcttcctgctacgccactgtctgcctcagagaggtcatgaaa
tgtgacccttaa
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