Oncorhynchus mykiss (rainbow trout): 110499773
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Entry
110499773 CDS
T07259
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04110
Cell cycle
omy04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110499773 (smc1b)
04114 Oocyte meiosis
110499773 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110499773 (smc1b)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110499773 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
110499773 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
110499773
NCBI-ProteinID:
XP_021432512
Ensembl:
ENSOMYG00000001251
LinkDB
All DBs
Position
2:92028434..92049230
Genome browser
AA seq
1236 aa
AA seq
DB search
MGFLKQLDVDNFKSWRGKQVIGPFKRFNCIIGTNGSGKSNVMDALSFVMGERAATLRVKH
TRDLIHGAHIGKPVSTTASVTMRYCDDNGEELNFCRSISGDSSEYRINGRQITLAKYTEE
LEKIGIVTKARNCLVFQGAVESIAMKNPKERTKMFERISQSLELSDDYDRKKEALQKAKE
DTQFHFNKKRTAAAEKKQVSSEKVEAQKYQELVDDLNQGRLQLNLFQLYHNQQGLSALSK
TLRKRQEAVAGQKTGLNGWEQSVKAQKKEHGRFTRELQQIEKEIRGQEQTLSLRRSQYIK
AKVNTSHHLKKVDDTRGALEKSQRMGAKKEEELAEFHQELQELERAWRDYERHAQEELTN
RKADIQLEEEQLERYKELKELARKQGALLSQQAKKMHWEVKADHQKIEFDQRRKKEVEVS
IKHSQTQLGDFTRRADKLEEYTNTCKSSLEESRQQEEVLSAELQRGRVRGEEVNQELGEV
LGELQNARLDSQESKRQQQRNEVLENLLRLYPDTLFGRLVDLCSPIHKKYQLAVTKVFGR
YMNAIVVSSEKVARDCIRFVKEERAEPETFLPIDYLDVSPLNERLRGVRGAKMMVDVVQC
SPTAPQLKKVIQFVCGNALVCETLKEARAIAFDGPERLKTVALDGTMFSKSGVISGGSSY
LRSKARRWDEKDMTKLKELKEQLTAELRGLVKLKRKEPELKQIQSQAQGVQTRLKYSHTE
LDTLRKKSIPNCHAEMSRLEAELANVESQLEMQKENREIKELEMKKLQDRINQMEDVVFS
DFCAEIGVANIREYEQEHLKQQQDVDRKRLEFESQRTCLKAQLEYEQGQLEQQRKKMKKI
EETIALEQCRVEEQKQEEEKLLVVMEESQSKVLDLKNHLLEKRTQASDSKAQVDQTMKSL
QESSREQVKLQREVISAETALEQLRIWKHNLLLGCKIQGLPITLLSGSLDEISEVQLDSE
SLTESTCTTMDIYEREALMVIDYSGLGAELKDLAGEEVDPQVERLKETVSSLEGVLQRST
APNLKALEKMRVVKDKFQGVVDAFDASSKAARRSNQEFEQVKAKRFRLFSQCFEHVSVVI
DQIYKQLCRNTSAQAILSAENPDEPYLDGINYNCIAPGKRFMAMDNLSGGEKAIAALALV
FAIHSFRPAPFFVLDEVDAALDNTNIGKVTSFIREQSRESLQIIVISLKEEFYSRADALL
GVYPEFNECMFSRMLTLDLSPYPLNEENGTEREKEM
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctaaagcagttggatgtggataattttaagtcttggcgagggaagcaagta
attggaccttttaaaaggtttaactgtattattggcacaaatggatccggtaagtcgaac
gtgatggatgccctgagcttcgtgatgggggaacgggcagcgactctccgcgtgaagcac
accagggacctcatccacggagcccacattggcaagccggtgtccaccacggccagcgtc
accatgcgctactgcgacgacaacggagaggagctcaacttctgtaggagcatatcgggg
gactcctctgagtatcgcatcaatggcagacaaattacccttgccaagtacacagaggaa
ctggagaagataggcattgtgactaaagctagaaactgtctggtattccagggggcggtg
gagtccatcgccatgaagaaccccaaggagcggaccaagatgtttgagcgcatcagccag
tctctggagctgtctgatgactatgacaggaagaaggaggctttgcagaaggctaaagaa
gacacgcagttccacttcaacaagaagaggacagccgccgcagagaagaagcaggtctcc
tcagagaaagtggaggcccagaagtaccaggagttggtggacgacctgaaccaggggagg
ctgcagctaaacctgttccagctgtaccacaaccagcagggcctgagtgccctgtcaaag
accctgaggaagagacaggaggctgtggccggtcagaagacaggactgaatgggtgggag
cagagcgtcaaggcccagaagaaagaacatggacgctttaccagagagctgcagcagatt
gagaaggagatccgtgggcaggagcagaccctgtccctgcgtcggtcccagtacatcaag
gccaaggtgaatacatcccaccacctaaagaaggtagatgatacccgtggggccctggag
aagagccagaggatgggtgccaagaaagaggaggagctggctgagttccatcaggagctc
caggagctggagagggcctggagggactatgagagacatgcccaggaggagttgaccaac
cggaaggctgacatacagctggaggaggaacagttggagcgctataaggagctgaaggag
ctggccaggaagcagggggccctcctgtcccagcaggctaagaagatgcactgggaggtc
aaggctgaccaccagaaaatcgagtttgaccagcggaggaagaaagaagtggaggtaagc
attaagcacagccagactcagctgggggacttcaccaggagagcagataaactggaagag
tacaccaacacctgcaagagctctctggaggagtctcgtcagcaggaggaggtgctgtct
gcggaactgcagagagggagggtgaggggggaggaggtgaaccaggagttaggggaggta
ctgggagagctgcagaacgccaggctggacagccaggagagtaagaggcagcagcaacgc
aacgaggtcctggaaaacctcctcagactctaccctgacacactgtttggtcgtctggtg
gacctgtgcagccccatccataagaagtaccagctggccgtcaccaaggtgtttggacgc
tacatgaacgccatagtagtgtcgtcagagaaggtggctcgggactgcatccgctttgtc
aaagaggagagggccgaaccagaaaccttcttacccatagattacctggacgtgagccct
ctgaatgagcggctgcgtggggtgcgtggagctaagatgatggtggacgtggtgcagtgt
tctcctaccgctcctcagctgaagaaagtcatccagtttgtgtgtggcaacgctcttgtc
tgtgagacgctcaaagaggccagagccatcgccttcgacgggcctgagcgactcaagacg
gtggctctggacggtaccatgttctccaagtcaggggtgatctctgggggctccagctac
ctgcggagcaaggcccggcgctgggacgagaaggacatgaccaagctgaaggagctcaaa
gaacagctgactgcagagctacgtggtctggtgaagctgaagcgtaaggagcctgagctg
aaacagatccagtctcaggctcagggggttcagacccgtctgaagtactcccacactgaa
ctggacaccctccgcaagaagagcattcccaactgccacgcggagatgtctcgcctggag
gctgagctggccaacgtggagtctcagctggagatgcagaaagagaacagggagatcaag
gagctggagatgaagaagctccaagacaggatcaaccagatggaggacgtggtgttctca
gacttctgtgctgagataggagtggccaacatcagggagtatgaacaggagcatctcaaa
cagcagcaggatgtagacaggaaacggttggagtttgagtctcagcggacctgtctgaag
gcccagttggagtatgaacagggtcagctggagcagcagaggaagaagatgaagaaaata
gaggagaccatcgccttggagcagtgcagagtggaagaacagaagcaggaggaggagaag
ctgctggtggtgatggaagagagtcaatctaaagtgttggatctgaagaatcatctgctg
gagaagaggacccaggcttctgactctaaggcccaggtggaccaaacgatgaagagcctt
caggagagctccagagagcaggtgaagctgcaaagggaggtaatctcagctgagacagcc
ctggagcagttgaggatctggaaacacaatctgctgctaggttgtaagatccagggcctg
cccatcacgctgctgtctggcagcttggacgagatcagtgaggtgcagctggactcagag
tcactcacagagagcacctgcaccactatggacatctacgagagagaggcgctgatggtc
atcgactactctggcctgggagctgagctgaaggatcttgcaggggaggaggtggacccc
caggtagagcgtcttaaggagacagtgtcctctctagagggggtcctacagcgctccaca
gcccccaaccttaaagccctggagaaaatgagggtggtcaaggacaaattccagggggtg
gtggacgcgtttgatgccagcagcaaggcagccagaaggagtaaccaggagtttgagcag
gttaaagccaaacgcttcagactcttcagtcagtgctttgaacacgtctctgtcgtcatc
gaccagatctacaaacaactgtgcaggaacaccagtgctcaggccattctgagtgctgag
aacccagatgagccctacctggatggcatcaattacaactgtattgctcctgggaaacgc
ttcatggccatggacaacctgtctggaggagagaaggccatcgctgccctggctctggtg
ttcgcaatacacagcttccgtccagctccgttctttgtcctggatgaggttgatgcagcc
ctggacaacaccaatattggcaaagtgaccagctttatcagggagcagtcgagagagagc
ctccagatcatcgtcatctctctgaaggaggagttctactctagagctgacgctctgctg
ggggtctaccctgagtttaacgagtgcatgttcagccgcatgctgacgctggacctaagt
ccctatcccctgaacgaagagaacggaacagagagagagaaggagatgtaa
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integrated database retrieval system
