KEGG   Oncorhynchus mykiss (rainbow trout): 110499876
Entry
110499876         CDS       T07259                                 
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin isoform X1
  KO
K12388  sortilin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142  Lysosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    110499876 (si:dkey-159a18.1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 DUF4245
Other DBs
NCBI-GeneID: 110499876
NCBI-ProteinID: XP_021432609
Ensembl: ENSOMYG00000020508
LinkDB
Position
21:18247128..18268691
AA seq 881 aa
MTWRLLVLGGACLLLMGVTGQCKEQRNRRTVSFHQTQQDGDQRQVLSRPERDTTASPRPT
FTACKLPLTPLEHRVLDENTHETGFHGDDGSSFTVTWVGDGTGVILVLSTISAPLDSFFE
GGSSRLYRSADYGKSFHDISHLINNTFIRKEFGLLAGPGNSQQVILTADTPVLDNTGGVI
FTSTDAGVSFMSVQLPFHPAQPITFHFLNPEYLVVISIDGGLWLSLDFGAVWKKVHEGTQ
SFTWGSGITLFFSFSPKGTVEADRRGELFLKRTEDLGKTFTTVAHSIFSFGYVGGFLFTS
VIETLGAPRVIYVSSDQGDHFNKAQLPSASTEQFYSVLDGDEDMIFMHVDNPGEESYFGT
VYTSDDRGILYSKSLERHLFGGEGKSDFTNVTSMRGVYLTNILEEDGRIRTVISFNRGGE
WTLLNKPQNVECGEDSRNDCNLHIHGEHSRYNGITPMLPLSDPTAVGLVIAHGSVGDSIS
STRPDVYVSEDGGYKWRGSLRGPHHYSILDAGGLVVAVEAHPMDGQINTIKFSTDEGQCW
KVYNFTEQPIFFAGLTSEPGTKTMNISVWGYRPEDDHQPMWVVVTIDFQSLLTRECGNQD
YVQWLAHATGGGDLATEGCVLGYKETFRRLRKLSVCRNGRDYVVSRQKSPCPCTREDYLC
DYGYYRHENSSECMRQLDTADHALEVCLNGEEEELRTSGYRKVPSDKCEGGFTPLRIKET
VNRHCGNSSQPPTASPYSETPREKMLLIVVCVGSGIVILVAVAAAVYTVRRMGYGNSFGT
TTAPLPPTQRVSPVATEHQSSQWIQMMILLNEQHEIKYLDDDLQSLAIWMYGIPLVVLRT
CCISMERCLGFVRNKLQMSCRWYADVPSYLLSEEHFPLDTG
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgacttggagactgttggtcctcgggggggcatgcttgcttcttatgggtgtgacgggt
cagtgcaaagagcaacgaaaccggagaacggtgtctttccatcagactcagcaagatggg
gaccaacgccaagtcctctcacggccagaaagggataccacagcttctccaagacccact
ttcaccgcttgtaaactccctctcacaccattagaacaccgggtgttggatgaaaataca
cacgagacagggtttcatggtgacgatggctccagttttactgtcacatgggttggagac
gggacaggagtaatcttggtgttgtctacaatcagtgctcctctagattccttcttcgag
ggcggttcttcacgattgtaccgcagtgcagactatggcaagtctttccatgatatttct
catctcatcaacaacaccttcataaggaaggaatttggacttctggctggaccagggaac
tctcaacaggtgattctgactgcagacaccccggttttggacaacaccggtggcgtcatc
tttacctcaactgacgccggagtgtcgtttatgtctgtccagctgccttttcacccggcc
cagccaatcaccttccacttcttgaatcccgagtacttagtagtcatcagcatagatggc
ggcctgtggctttctctggactttggggctgtgtggaaaaaggttcacgaaggaacacaa
tctttcacgtggggctccggcatcactctcttcttcagcttcagtcccaaaggaacagtg
gaggcagacagaagaggagagctcttcctaaagaggacagaagacctggggaagacattc
accaccgtggcacacagcatcttctccttcggctatgtaggaggcttcctcttcacctcc
gtcatagagacactgggagccccacgtgtcatctatgtgtcctcagaccaaggggaccac
ttcaacaaagcccagctcccctccgcctccactgagcagttctactcggttctggatggg
gatgaggacatgattttcatgcatgtggacaatccaggagaggaaagctactttgggacg
gtgtacacatcagatgaccggggcatcctgtactctaagtctctagagcgccacctgttt
ggtggggaagggaagagcgacttcaccaacgtcacctccatgagaggagtgtacctcacc
aacatactggaggaggacggccgcattcggacagtcatttcatttaaccgagggggagag
tggacactcctcaacaagccccagaatgttgagtgtggtgaggattcaagaaatgattgt
aacttgcacatccacggtgagcacagtcgctacaacggcatcactcccatgctgcctctc
tctgaccccactgccgttggccttgtcatcgcccacggcagtgtgggggactccatctcg
tcaacacggcctgacgtgtacgtgtcagaggacggggggtacaagtggaggggttccctg
agggggccccatcactacagcatcctggacgctggggggctcgtcgtggctgtggaggcc
caccccatggacggccaaatcaacaccatcaagttctccacagatgagggccagtgttgg
aaggtgtacaactttacagagcagcccatcttcttcgctggcctgacatctgagccgggc
accaagaccatgaacatcagcgtgtggggttaccggcccgaggatgaccaccagcccatg
tgggtggtggtcaccattgacttccagagtctcctcaccagagagtgtggtaaccaggac
tatgttcagtggttggcccatgccacagggggcggggacttggccacagaggggtgtgtc
ttgggctacaaggagaccttcaggaggctgaggaagctgtccgtctgcaggaatggacgg
gactacgtggtgagcaggcagaaaagcccctgcccctgcaccagagaggactacctatgt
gactatggttactatcgtcatgagaacagctcagagtgtatgagacaactggacactgca
gaccacgccctggaggtgtgtctaaatggagaggaggaggagcttaggacttcggggtac
cgtaaggttcccagtgataagtgtgagggaggtttcactcccctgcgcataaaggagaca
gtcaacaggcattgtgggaactctagtcagccccccactgccagcccatattctgaaacc
ccgagagagaagatgctgttgatcgtagtttgtgttggatcagggattgtcattctggtg
gctgttgccgctgctgtctatactgtaaggagaatgggctatggaaatagcttcgggacg
acgactgctccattgccgccgacccagagagtgtcgccagtagcaacggaacatcagtct
tcccagtggattcagatgatgatcttattgaatgaacaacatgagattaaatatcttgac
gatgatctccagagcttggccatttggatgtatggcattccacttgttgtattacgtacc
tgttgcatctcaatggaaagatgtctagggtttgtaaggaacaaattgcagatgtcatgt
agatggtatgcagatgtcccaagctatttattgagcgaagaacacttcccactggacact
ggttga

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