Oncorhynchus mykiss (rainbow trout): 110499876
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Entry
110499876 CDS
T07259
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110499876 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF4245
Motif
Other DBs
NCBI-GeneID:
110499876
NCBI-ProteinID:
XP_021432609
Ensembl:
ENSOMYG00000020508
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Position
21:18247128..18268691
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AA seq
881 aa
AA seq
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MTWRLLVLGGACLLLMGVTGQCKEQRNRRTVSFHQTQQDGDQRQVLSRPERDTTASPRPT
FTACKLPLTPLEHRVLDENTHETGFHGDDGSSFTVTWVGDGTGVILVLSTISAPLDSFFE
GGSSRLYRSADYGKSFHDISHLINNTFIRKEFGLLAGPGNSQQVILTADTPVLDNTGGVI
FTSTDAGVSFMSVQLPFHPAQPITFHFLNPEYLVVISIDGGLWLSLDFGAVWKKVHEGTQ
SFTWGSGITLFFSFSPKGTVEADRRGELFLKRTEDLGKTFTTVAHSIFSFGYVGGFLFTS
VIETLGAPRVIYVSSDQGDHFNKAQLPSASTEQFYSVLDGDEDMIFMHVDNPGEESYFGT
VYTSDDRGILYSKSLERHLFGGEGKSDFTNVTSMRGVYLTNILEEDGRIRTVISFNRGGE
WTLLNKPQNVECGEDSRNDCNLHIHGEHSRYNGITPMLPLSDPTAVGLVIAHGSVGDSIS
STRPDVYVSEDGGYKWRGSLRGPHHYSILDAGGLVVAVEAHPMDGQINTIKFSTDEGQCW
KVYNFTEQPIFFAGLTSEPGTKTMNISVWGYRPEDDHQPMWVVVTIDFQSLLTRECGNQD
YVQWLAHATGGGDLATEGCVLGYKETFRRLRKLSVCRNGRDYVVSRQKSPCPCTREDYLC
DYGYYRHENSSECMRQLDTADHALEVCLNGEEEELRTSGYRKVPSDKCEGGFTPLRIKET
VNRHCGNSSQPPTASPYSETPREKMLLIVVCVGSGIVILVAVAAAVYTVRRMGYGNSFGT
TTAPLPPTQRVSPVATEHQSSQWIQMMILLNEQHEIKYLDDDLQSLAIWMYGIPLVVLRT
CCISMERCLGFVRNKLQMSCRWYADVPSYLLSEEHFPLDTG
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacttggagactgttggtcctcgggggggcatgcttgcttcttatgggtgtgacgggt
cagtgcaaagagcaacgaaaccggagaacggtgtctttccatcagactcagcaagatggg
gaccaacgccaagtcctctcacggccagaaagggataccacagcttctccaagacccact
ttcaccgcttgtaaactccctctcacaccattagaacaccgggtgttggatgaaaataca
cacgagacagggtttcatggtgacgatggctccagttttactgtcacatgggttggagac
gggacaggagtaatcttggtgttgtctacaatcagtgctcctctagattccttcttcgag
ggcggttcttcacgattgtaccgcagtgcagactatggcaagtctttccatgatatttct
catctcatcaacaacaccttcataaggaaggaatttggacttctggctggaccagggaac
tctcaacaggtgattctgactgcagacaccccggttttggacaacaccggtggcgtcatc
tttacctcaactgacgccggagtgtcgtttatgtctgtccagctgccttttcacccggcc
cagccaatcaccttccacttcttgaatcccgagtacttagtagtcatcagcatagatggc
ggcctgtggctttctctggactttggggctgtgtggaaaaaggttcacgaaggaacacaa
tctttcacgtggggctccggcatcactctcttcttcagcttcagtcccaaaggaacagtg
gaggcagacagaagaggagagctcttcctaaagaggacagaagacctggggaagacattc
accaccgtggcacacagcatcttctccttcggctatgtaggaggcttcctcttcacctcc
gtcatagagacactgggagccccacgtgtcatctatgtgtcctcagaccaaggggaccac
ttcaacaaagcccagctcccctccgcctccactgagcagttctactcggttctggatggg
gatgaggacatgattttcatgcatgtggacaatccaggagaggaaagctactttgggacg
gtgtacacatcagatgaccggggcatcctgtactctaagtctctagagcgccacctgttt
ggtggggaagggaagagcgacttcaccaacgtcacctccatgagaggagtgtacctcacc
aacatactggaggaggacggccgcattcggacagtcatttcatttaaccgagggggagag
tggacactcctcaacaagccccagaatgttgagtgtggtgaggattcaagaaatgattgt
aacttgcacatccacggtgagcacagtcgctacaacggcatcactcccatgctgcctctc
tctgaccccactgccgttggccttgtcatcgcccacggcagtgtgggggactccatctcg
tcaacacggcctgacgtgtacgtgtcagaggacggggggtacaagtggaggggttccctg
agggggccccatcactacagcatcctggacgctggggggctcgtcgtggctgtggaggcc
caccccatggacggccaaatcaacaccatcaagttctccacagatgagggccagtgttgg
aaggtgtacaactttacagagcagcccatcttcttcgctggcctgacatctgagccgggc
accaagaccatgaacatcagcgtgtggggttaccggcccgaggatgaccaccagcccatg
tgggtggtggtcaccattgacttccagagtctcctcaccagagagtgtggtaaccaggac
tatgttcagtggttggcccatgccacagggggcggggacttggccacagaggggtgtgtc
ttgggctacaaggagaccttcaggaggctgaggaagctgtccgtctgcaggaatggacgg
gactacgtggtgagcaggcagaaaagcccctgcccctgcaccagagaggactacctatgt
gactatggttactatcgtcatgagaacagctcagagtgtatgagacaactggacactgca
gaccacgccctggaggtgtgtctaaatggagaggaggaggagcttaggacttcggggtac
cgtaaggttcccagtgataagtgtgagggaggtttcactcccctgcgcataaaggagaca
gtcaacaggcattgtgggaactctagtcagccccccactgccagcccatattctgaaacc
ccgagagagaagatgctgttgatcgtagtttgtgttggatcagggattgtcattctggtg
gctgttgccgctgctgtctatactgtaaggagaatgggctatggaaatagcttcgggacg
acgactgctccattgccgccgacccagagagtgtcgccagtagcaacggaacatcagtct
tcccagtggattcagatgatgatcttattgaatgaacaacatgagattaaatatcttgac
gatgatctccagagcttggccatttggatgtatggcattccacttgttgtattacgtacc
tgttgcatctcaatggaaagatgtctagggtttgtaaggaacaaattgcagatgtcatgt
agatggtatgcagatgtcccaagctatttattgagcgaagaacacttcccactggacact
ggttga
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