Oncorhynchus mykiss (rainbow trout): 110499945
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Entry
110499945 CDS
T07259
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110499945
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
Other 90S particles
110499945
Pre-60S particles
Other pre-60S particles
110499945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_RFWD3
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
110499945
NCBI-ProteinID:
XP_021432678
Ensembl:
ENSOMYG00000011147
LinkDB
All DBs
Position
21:19892477..19900807
Genome browser
AA seq
497 aa
AA seq
DB search
MSSQITCVGWVKRGISKETPDKVELSKEELQHIIAEAKEQLGERVGEEEEEEEEEDEGMA
SGQEQSDEAEAVQGQEPEQDENEAGREEADELATYGLDRYDEEDSVTANLGDSLAGLTVF
STNEEDPYITIKDTDQYEREDFQIKPNDNLIISGRAEKDCCNLEIHVYNSEEESLYIHHD
ILLPAYPLCVEWLNFDPSPEGTGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKASKK
KKKSKKAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADETVILWDLAQGKPATTLRKHTD
KVQTLMFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNFLA
STEDGFVYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGNKP
NLVHTRDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVAEVFGNRERLVATT
APEASSSTSSTADMELS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaaatcacttgtgttggatgggtaaagcgtggcatttcgaaggaaacacca
gataaggtggagttgagcaaagaagaattgcaacacataatagcagaggcaaaagaacaa
ttgggtgaacgtgtaggtgaagaggaggaggaggaggaggaggaggatgaaggcatggcc
agcgggcaggaacagagtgacgaggcagaagctgttcagggacaggagccagagcaagat
gaaaatgaagcaggaagggaggaagcagatgaactagcaacgtatggtttggatagatat
gatgaggaagactcggtgactgccaaccttggtgacagccttgccggcctcacagtgttc
agcaccaatgaggaggatccttacattaccatcaaagacacagaccagtatgagcgagag
gactttcaaatcaagcccaatgataacctcatcatttcaggcagagcagagaaggactgc
tgcaacctggagattcacgtatacaactccgaggaggaatccctctatattcaccatgac
atactcctaccagcctatccactgtgtgtggagtggcttaactttgaccctagtccagaa
ggcactggcaattatgcggctgtaggcaacatgacaccgcagattgacgtgtgggacctg
gatgtggtggactgcctagagcctgccttcactctggggagcaagaaggcctccaagaag
aaaaagaaaagcaaaaaggctgcagcagagccagtggaaggtcatacagatgctgtactg
gacttatcctggaacaaactggtccgcaacgtcttggccagtgggtcagctgacgaaacc
gtgatcctgtgggatctggcacagggaaagccggccacaacactgcgcaaacacactgac
aaggttcagacgttgatgttccacccctttgaagctcagaccctgatatcaggatcatac
gataagtcggcaatcctgtatgactgccgcagcccggacagcagccatcgcacttggagg
tttagcgggcaggtggaaagggtcgcctggaaccacttctcgccctgcaacttcctggcg
agcacagaggacggctttgtttactgtctggacgcacgctcggacaagccagtgtttacg
ctaagggcacatgacggagaggtgtcaggcttggaccttagcagccagatccggggatgc
ttggtcacctcgtcagcagacaaacacgtcaagatttgggacatcttggggaacaagccc
aatttagttcacacccgggacatgaaaatgggggtgctgttctgtgcagcgtgctgtcct
gacatgccctttgtatatgcctttggaggacagagggatggcctgcgggtttgggacata
agtgatgtggcagcagtcgctgaggtgtttggcaatcgggagcggttggtggcaaccaca
gcgcctgaggcatccagcagcacttcctccacagcagatatggagctttcctag
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integrated database retrieval system
