Oncorhynchus mykiss (rainbow trout): 110500097
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Entry
110500097 CDS
T07259
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110500097
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
110500097
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110500097
NCBI-ProteinID:
XP_021432938
Ensembl:
ENSOMYG00000020565
UniProt:
A0A8C7R3P4
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Position
21:24315919..24321712
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AA seq
776 aa
AA seq
DB search
MSLLSTKKLRCYFPHLFNLIEKTGYAVANMLGTSTSTEQGARENPIVLEMCRISPLKFED
TPELISSVAPDTVEGFIKAKKNKALSEQGPEEPAIEHNQKDGHRLTVEKRGKDPKHKEQT
VTELEVVEKERKKLKKGNEEKQPNVIQDEMEVPDPEEQTGGKTKKKSKNLQTQQVGVDLV
IADENNMNSRKNKRKHNDIEPERVIDSVLSKAAVDVSAVTAPDETRRSKKKHKNRQTELE
EGAESCRTVSRTADDPKIIELHPEMVKRGKNVVTEAEENVKKRKQNKKKHTESELNDCPD
KADRPGIKEQTERKLKSKRPKTDGGSAAVEVSGRKKKHRRVSDKGMASVHSAADVLDLAV
PNDNRTHDAGANGETEGAHSTMVETGTQHNKPCLKEETLLVDDWQALKDLKEFIPNVESK
SVDEIQKMIKYDLDRFKEFRRQGLSLRSGRFNAQENERLRSNVYDFLSLTGIQSGSELFH
PQRFKEEEANIKKLKRQHRFHERIGEGIPRSWHQVYIRGRKMFDVSNYKGRFTEEELHTL
KKLQTLHGNKWAKISALTGRSESSLEKRFAQMSANKGAWTEEELKRLMEAVRKHLVGQAE
PGSGPATVRKDQLYNNIPWTDVCQTVETRHWSQCRIKWLGVLKHKMAYGQPVFSGHTKSL
QGKVDLIKALNAMQVEDVADINWEEIAHTIGDVTPRYVQTHYYRLKVANVPLWQSMSFCE
IIDFLNSRVLPNCEERLKVLIKSGEVVSRNDPQELFLLSEIFDNEDGNYYSDIQNS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgtcaacaaagaagttacggtgttactttccccacttgttcaacctgata
gagaaaacaggttatgctgtagccaacatgctggggacttcaacatccactgaacagggg
gctagggagaatcccatagtgcttgagatgtgtcgaatatcccctcttaaatttgaagac
actcctgaattaatctcatcagtggcacctgatacagtcgagggattcataaaagccaaa
aagaataaagcactatctgaacagggaccagaagaaccggcaattgagcataatcaaaag
gatggtcaccggttgacagtcgagaaaagaggtaaagaccctaaacataaagagcaaaca
gtgactgagctggaagtggtggagaaagagaggaagaaacttaaaaaaggaaacgaagag
aagcagccaaatgttattcaagatgaaatggaggtaccagatcccgaggaacaaactgga
gggaaaacaaagaaaaagtcaaagaatcttcaaacacaacaggtgggagtggatttagtg
attgctgatgagaataatatgaatagccggaagaataagagaaaacataatgacattgag
ccagaacgggtgatagacagtgtcctctcaaaggctgcagtagacgtttcagctgtaact
gcgccagatgaaaccagaaggagtaagaagaaacacaagaacagacaaacagaacttgag
gagggagcggaaagctgtcggacagtttcaagaacagcagatgatccaaaaatcatagaa
ctgcaccctgaaatggtcaagagaggtaaaaatgtggtaactgaggcagaggagaatgta
aaaaaaaggaaacaaaataagaaaaaacacacagagagtgaactgaatgattgtccagat
aaagcagaccgtccaggtataaaagaacaaactgaaagaaaattgaagtcaaagaggcca
aaaacagatggagggtctgccgctgtggaggtcagcgggagaaagaaaaaacaccgcaga
gtgtcagacaagggaatggccagtgtccactctgcagcagatgttttggatttagctgtt
ccaaatgacaacaggactcatgatgctggagcaaacggtgagacagagggcgcccattca
accatggttgagacagggacccaacacaacaaaccctgcctaaaggaagaaactctcctt
gtggacgactggcaggctctgaaggatctcaaagagttcattcccaacgttgagtcaaag
tctgttgacgagatccagaagatgataaagtatgatcttgatcgattcaaggaattccga
agacaaggcctttccctgcgaagtggaagattcaatgcgcaggagaacgaacgactcagg
agtaacgtctacgacttcctgtctctcactgggattcagagtggctctgagctcttccat
ccacagcgcttcaaagaggaagaagcgaatatcaagaaattgaagaggcagcacagattc
catgaaagaataggtgaaggaatacccaggtcttggcatcaagtctatatacgtgggagg
aaaatgtttgatgtcagcaactacaagggcaggttcaccgaagaagagcttcacactttg
aaaaaactacagacgttgcacggcaacaagtgggcgaagatctcggcgttgactggccga
agcgaatcgtccctagagaaacgttttgctcaaatgtccgcaaacaaaggtgcgtggacc
gaggaagaactgaaaagactaatggaagctgtgcggaagcacctggtgggacaggcagag
cctggcagtggaccggccaccgtcaggaaagaccagctgtacaacaacatcccctggaca
gatgtgtgccagacggttgaaacgcgccactggtcccagtgtcgaataaaatggttgggt
gttttgaagcacaaaatggcatatggacaaccagtattcagtggacacacgaaatcatta
cagggcaaagtggatttgatcaaagccttgaatgcaatgcaggtggaagatgttgcagat
atcaactgggaagaaattgctcacacaattggggatgttactccacgctacgtacagaca
cactactacaggctaaaggtagccaacgttccgttgtggcagagcatgtccttctgtgag
atcattgacttcctcaacagtagagttctccccaattgtgaagagcgcctcaaagttctg
ataaagtcaggagaggtggtgtccagaaatgatcctcaagagctcttcctactctctgag
atatttgataatgaggatggcaactactacagcgacattcagaacagctga
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