Oncorhynchus mykiss (rainbow trout): 110500110
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Entry
110500110 CDS
T07259
Name
(RefSeq) podocalyxin
KO
K06817
podocalyxin-like
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110500110
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Gene cluster
GFIT
Motif
Pfam:
CD34_antigen
DUF6377
Chordopox_A13L
SCF
SPOC
Motif
Other DBs
NCBI-GeneID:
110500110
NCBI-ProteinID:
XP_036813288
UniProt:
A0A8K9WPS9
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Position
21:complement(24604892..24622595)
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AA seq
516 aa
AA seq
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MKQSFVKKKNRMETKMRITWALLPLGFLLHCTHADPIQTTFISSAPNSTQNGPTHTVTSS
SLINGPGTTLADLTVPSGAALSTFTAGRSSGNVESTTMTTAGLDSTSSTGTHTQTPTSST
GTDAQTTTSFTGTDAQTTTSSTGTDAQNTTSSTGTDAQTITSSTGTDAQTTTSSTGTHTT
VQFTSSSGTLSQTTTSSTGTDAQNTTSSTGTDAQTTTSSTGTNAQNTTSSTGTDAQTTTS
SSGTHTQTTTSSSGTHTQTTTSSAGTPHFTAVTPVGRRHTPILTTPWSRSSSPSQQPSTS
SPVGSGSSFAITTTRAQGGMVLTTMAETTTTTATTTSPPMSFMFVMSKRNEENHEKKDLE
ALCRHLMSQMHDANCTLAARENNGQTTVDSVVITGKVDNAVVQQYYEEITRKQSDNMTLI
AILASCGALLAMIVGFALYAAYHRKSYRKNHQQHLTEEMQTVENGYHDNPTLEVMEVQQE
MQEKKVALNGEFNDSWIVPIDNLLKEDMPDEEDTHL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaagtttcgtaaaaaaaaaaaacagaatggaaacgaaaatgcgaatcacgtgg
gcacttcttccacttggttttctacttcactgtactcatgctgatccaatacaaacaacc
tttatctcttcggcccccaactccacacaaaatggacccacccatacagttacctcctcc
agtctaatcaatgggcccgggactacactagccgaccttaccgtaccaagtggggcggcg
ttgagcacctttaccgctgggaggtccagtggtaatgtggagtccaccaccatgactact
gctggactggactccactagctccaccggaacccacacccagacccccactagctccact
ggaaccgacgcccagaccaccactagcttcacaggaaccgacgcccagaccaccactagc
tccaccggaaccgacgcccagaacaccactagctccaccggaaccgacgcccagaccatc
actagctccaccggaaccgacgcccagaccaccactagctccaccggaacccacactacc
gtgcaattcactagctcctcaggaaccctctcccagaccaccactagctccaccggaacc
gacgcccagaacaccactagctccaccggaaccgacgcccagaccaccactagctccacc
ggaaccaacgcccagaacaccactagctccaccggaaccgacgcccagaccaccactagc
tcctcaggaacccacacccagaccaccactagctcctcaggaacccacacccagaccacc
actagctccgccggaacgcctcacttcactgcagtcacaccggtgggtaggcgacatact
ccaatccttacaaccccatggtcaaggtcgtcctctccatcccagcaaccttccacatcc
agccctgtgggttcaggaagcagttttgctatcaccacaacccgtgcacagggaggaatg
gtgttaacaaccatggctgagactacaaccacgacggccactaccacaagtcctcccatg
agctttatgtttgtcatgtccaaaagaaatgaagagaatcatgagaagaaggacctggag
gcgctgtgtcgacacctgatgtctcaaatgcacgacgctaactgtactctggctgcgaga
gagaacaacggacaaaccaccgttgacagcgtggtaattaccggcaaagtggacaatgct
gtcgtccagcaatactatgaggaaatcaccagaaaacaaagtgacaacatgaccctgatt
gccattttggcgtcctgcggagctctgctggccatgattgtaggcttcgccctttacgcc
gcataccaccgcaagtcctatcggaagaaccaccaacaacacctgacagaggagatgcag
acggtggagaacggttaccacgacaaccccacgttggaggtgatggaggtgcagcaggag
atgcaggagaagaaggtggccctgaatggagagttcaacgacagctggattgtccccatc
gacaacctgctcaaagaagacatgccagatgaggaggacactcacctgtag
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