Oncorhynchus mykiss (rainbow trout): 110500115
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Entry
110500115 CDS
T07259
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110500115
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110500115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
110500115
NCBI-ProteinID:
XP_036817285
Ensembl:
ENSOMYG00000021993
LinkDB
All DBs
Position
1:18922258..18954045
Genome browser
AA seq
1029 aa
AA seq
DB search
MAASNYYGFTHGAGPQYSVQPPPAYAHPTTASYNVQPAPTVAHAVTASYAPAPAQPARPV
ASAYPVAYQTHATPPDYGYRQPDPTPQPTTTPQTYQLPIYTETDNYSYGRLPAATSYETK
QYYQTSIAPAHRTPTEAYYQTGVKSGYSPVSTVYSQPPPPQRHVTTLKPLAPASSASTSY
NIYPVSTSVQQPPISSYTPCSSFSSTAGTYSGVSYSTYDSSGYTSTPSYYQPAQLPPPQP
QPPPQQSHPPPKQLTSSSWSNAGSNMVAAPTVNAYKKPMFHQNKLQKPKAPPKQPQLHYC
DICKISCAGPQTYREHLEGQKHKKKDAALKSGSAGGSNGPRGIQTQLRCELCDIACTGVD
AYAAHIRGAKHQKVVKLHTKLGKPIPSTEPVLVNNAPIISTSTAGKTTPIVTATAPVAPP
KLVVVNATKAPAPVKKPVAPKITLLANKSATPPVAKENEAKQSATVSKSETTSDDEDGDG
VGRQGDVQPVGHDYVEEVRNDDGKVIRFHCKLCECSFNDPNAKDMHLKGRRHRLQYKKKV
NPELPVEIKPSNRARKLQEGKLRKQKAVLKRQRDDEQRWHLEMRSEPDGSWHTEMSRYEE
DMYWRRREEEQLYWGEQRHMMPPPPLMSRPGMPVPPLLQPVRRPDSPDDRHIMAKHSTIY
PVEEELQAVQRIVSHTERALKLVSVSLLEKEPPSAAPSAAPSAAPSAAPSAAPSAATEAD
AGEKGPDNQAARMLKGVMRVGILAKGLLLHGDRNVELILLAAKKPTLSLLKDIAEQLPKE
MAPFSEDQYEVKAHPEEANIVIFSSKEPKMQVTISLTSPLMREDPAPDKEEKAGDKAAEK
GVPEKDPADVLNQNKCLEYLAALRHAKWFQARANGLQSCVIIIRVLRDLCQRVPTWGKMS
SWAMELLVEKAISSATGPLSPGEAMRRVLECIATGILLPDGPGLLDPCEKHQTDALWSMT
KQAREDITASAQHALRLLAFRQIHKVLGMDSLPASKASARNRKRRRDGSETGEGEVKKDK
KEDTEEVDA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcaattattatggattcacgcatggtgccggtcctcagtacagcgttcag
cctccaccagcctatgcccatcccaccacagccagctacaatgtccagccggcccctacc
gtggcccatgcagtgactgcctcctatgctcctgcccctgcacaaccagccaggcctgtt
gcctctgcctacccggtggcctaccagacccacgctacccccccagactatggctaccgg
cagccggaccccacgccccaacccaccaccaccccacagacataccagctaccgatatac
actgaaacggataactacagttacggacgcctgcctgcagccactagttatgagactaag
caatactaccagactagtatagctccagcccatcggacgccaacagaagcttactaccag
acaggcgtgaagagtggctacagtccagtcagcacagtatacagccagccgccaccacca
cagaggcatgtcacaactttaaagcctctggcccctgccagctcagcgtccaccagctac
aacatctacccagtgtccaccagtgtacagcagccccccatctcgtcttacaccccctgc
tcgtccttcagctccacagctggcacctactctggcgtcagctactctacttatgattca
agtggctacacttccaccccctcatactaccagcctgcccagctaccacctcctcagccc
cagccgcccccgcagcagtcccatccgcctcccaagcagctcaccagctcctcctggagc
aatgcgggcagcaacatggtggctgctcccacggtcaacgcctacaagaagcccatgttc
caccagaacaagcttcagaagccgaaagcaccgcccaagcaaccccagctgcactactgc
gacatctgcaagatcagctgtgctggaccgcagacgtaccgagagcacctcgagggccag
aagcacaagaagaaggatgcagctctgaagtctggcagcgcaggggggagcaacgggccc
cgggggattcagacccagctacgctgtgaactatgtgacattgcctgcactggcgtagac
gcgtacgctgcccatatccgaggggccaagcaccagaaggtggtgaagctccacaccaaa
ctaggcaaacctataccttcaactgagcctgttttagtgaacaatgctccaattatctca
acgtcgacagctgggaagacaacccctattgttacggcaactgctccggtagcgccaccc
aaactggtggtcgtaaacgccaccaaggccccagcacctgtgaagaagccagtcgcaccc
aaaataacccttcttgccaacaagtcggccacccctccagtagccaaggagaatgaagcc
aagcagtcagcaacagtgtcaaagagtgagaccacgagtgacgatgaggacggggatgga
gtggggaggcagggcgacgtccagcctgtaggacatgactatgtggaggaggtgcgtaat
gatgatgggaaggtaattcgcttccactgtaaactctgtgaatgcagtttcaatgacccc
aatgctaaagacatgcacctgaagggacgcagacaccggctgcagtacaagaagaaggtg
aacccagagctgccggtggagatcaagcccagtaatcgggccagaaagctgcaagagggc
aaactgaggaagcagaaggctgtgctgaagagacagcgggatgacgagcagcgctggcac
ttggagatgaggtcagagccagacggcagctggcacacagagatgagccgctatgaggag
gacatgtactggaggaggagggaggaggagcagttgtactggggggagcagaggcacatg
atgcccccccctccactcatgagccggcccggcatgccagttccccccctactgcagcct
gtgcgtcggccggactccccagacgaccgccacatcatggccaaacactccaccatctac
cctgtggaggaggagctgcaggcggtgcagaggatcgtctcccacactgagagagccctc
aaactggtgtctgtctccctgctggagaaagagcctccgtcggctgctccgtcggctgct
ccgtcggctgctccgtcggctgctccgtcggctgctccttcggctgctacagaggctgat
gctggagagaaaggaccggacaaccaggcggcccgtatgctgaagggggtgatgagggtg
ggcatcctggccaagggcctgctgctccatggggataggaacgtggagctcattctgctg
gctgccaagaagcccaccctctctctgctgaaggacattgctgagcagctgcccaaagaa
atggcgccattttctgaagatcagtatgaggtgaaggctcaccctgaggaagccaacatc
gtgattttttcgagcaaggagccaaaaatgcaggtcaccatctctctaacctcgccactg
atgagggaggaccctgcccctgacaaggaggaaaaggcaggagacaaagcggctgagaaa
ggggtgcctgagaaagaccctgctgatgttctgaaccagaacaagtgcctggaataccta
gctgctctgagacacgccaagtggttccaggctcgtgccaatggtcttcagtcctgtgtg
atcatcattagagtgttacgggatctttgccagcgagtgccaacatggggcaagatgtca
tcctgggctatggagctgctggtagagaaggccatcagcagtgccacagggcccctcagc
ccaggggaagccatgcgtagggtcctggaatgtatcgctactggcatcctactgccagac
ggtcctgggctgctggacccctgtgagaaacaccaaaccgatgctctgtggagcatgacc
aaacaagccagggaagacattactgccagcgcacagcatgctctgcgactgctggcgttc
cgtcagatccacaaggttctggggatggattccctgccggcgtccaaggccagcgctcgg
aaccgtaagcgcagaagggacgggagcgagacaggggagggggaggtcaagaaagacaag
aaggaggatacagaagaggtggatgcttga
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