Oncorhynchus mykiss (rainbow trout): 110500116
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Entry
110500116 CDS
T07259
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110500116
Membrane trafficking [BR:
omy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110500116
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Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
110500116
NCBI-ProteinID:
XP_036813294
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All DBs
Position
21:complement(24793606..24857940)
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AA seq
956 aa
AA seq
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MSASRRAPVENDRTCPKPRLGPALFPAPGLHYECTATAQLSEQRGRETERDLPVSFLCSS
KLASGTEQDAVLRLEQERAEIVSKYDKGKEGATVEPWEDASFHLYKVIDRFGFVHENELP
SYDSVEEKQKHLEVERTSKWLKMMKSWDKYKNSEKLVRRIYKGIPLQLRGEVWCLLLDVP
KIKEEKKDFYEKLKLRARGLSPDVRQIDLDVNRTYRDHVMFMTRYDVKQQALFHVLTAYS
VYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQKHAMHGFFIPGFPKLMRFQEH
HDRILKKMMPKLKSHLDTQEVFTSLYTMKWFFQCFLDRTPFTLTLRIWDIYILEGERVLT
AMSYTVLKLHKKHLLKLSMEDLVEFLQVTLAKDFFFEDDFVIEQLQNNMVELRRSKLELA
APGKEDEYPKKLLGQLPPEPAVNQNHVANGQSHAQPAEPPKAPSPSPERQRDSRPPSRAR
RDSLEKLVRQHKAEKREARSRGSGENSIHLDPHCKQPSAPTLSTPERGFTPTPSPAPSPS
PHPNPPTKVVDRGKPQNHATANHNSNAASSSSRKDIAPRWVKPSETKLEAAKAAAAREIQ
PSSSPDDTLLLNRRPRSRGLIPGSNRGSNASQYDNVPGGAEQDFVEVLELDRPPSQMRRS
ETPSLPPTHTPSLQGSMVSIGPVGRQAKHPIPTALSLNSPAGGKSYVHPNGQSQYHTPPQ
QYSPGRPAMVPLHYPPCSVSLEQRGLGEERHYGPPPSRGTPPMGLMYGERAYVTTQRPSH
SPEKALMNNSYATTHRQPPSSAQPPRTIQQLDSPGSNASTYLRQPTRLTSTAAAYPVYPP
VDYNRYEGRRRGEQTPPYLPEGPGRGGAAEVQPWRQQEGGDMSRALGGVPRSPSFQRAQM
SPVQEFTFPDGLAHYRTQFHEQQQQPTMRQQLPPLFGGPHYRHAPEAFTMQESMLL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctctaggagggcacctgtggagaacgaccgcacctgtccaaaaccccgcctg
ggccctgccctgttccccgcccccggcctccactatgagtgcactgctacagcacagctc
tctgaacagagagggagagaaacagagagagatctaccagtctccttcctgtgttcctca
aagctggcgtctggtacagagcaggatgctgtgctgaggcttgagcaggagagggctgag
atcgtctccaaatatgacaagggaaaagagggcgccactgtggaaccctgggaggatgca
agcttccacctgtacaaagttattgaccgcttcggcttcgtacatgagaatgaacttccg
tcctacgactcggtggaagagaagcaaaaacacttagaggtagaaaggacctcaaaatgg
ctgaagatgatgaagagctgggacaagtataagaacagtgagaagctggtgaggcggatc
tataagggaattcccctacagctccgaggagaggtgtggtgtctgctcctcgacgttccc
aaaataaaggaggagaagaaagacttctacgagaagctgaagctcagggctcgaggtctg
tctcctgacgtccgtcagattgacctggatgtgaacagaacctacagggaccacgtcatg
ttcatgacccgctacgacgtcaagcagcaggctctgttccacgtcctaacagcctactcc
gtgtacaacacggaggtggggtactgccagggcatgagtcagatcactgctctgttgctc
atctatatgaacgaagaggatgccttctgggctctggtcaaactgctgtctggacagaaa
cacgccatgcatgggttttttatccccggcttccccaagctgatgcgcttccaggagcac
catgaccgcatcctcaagaagatgatgcccaaactgaagtcacacctggacacacaggag
gtgttcaccagcctgtacactatgaagtggttcttccagtgtttcctggacaggaccccc
ttcaccctgaccctgcggatctgggacatctatatcctggagggagagagagttctgacc
gccatgtcctacacggtcctcaaactgcacaagaagcacctgttgaagctgtctatggag
gatctggttgagtttctgcaggtgactctggccaaggacttcttctttgaggatgacttt
gtgattgagcagctgcagaacaacatggtggagctaaggaggtccaaactggagctggcc
gcaccaggtaaagaggacgagtatcccaagaagcttcttgggcagcttcccccagagccg
gcggtgaaccagaaccacgtggcaaatggtcagagccacgcccagccggccgagccccca
aaagcgcctagcccctcccccgagcgccagcgggacagccgaccccccagccgggcgcgc
agggactccttggagaagctggtccggcagcacaaggctgagaagagggaggccagatca
cgggggtctggagagaactccatccacctagacccccactgcaaacagccctccgccccc
accctttctaccccagagagagggttcacacctacaccgtccccggcgccctctccctcg
ccacaccccaaccctcctacaaaagtggtggacagagggaagcctcagaaccacgccacg
gccaaccacaactccaatgccgcctccagcagctcccgtaaagacatcgccccgcgctgg
gtcaagccctccgagaccaagctggaggcggccaaggcagcggcggccagggagatccag
ccctcctccagccctgatgacaccctgctgctcaaccgccggccccgctccaggggcttg
atcccaggctccaaccgcggctccaacgcctctcagtacgacaatgtgcccgggggggca
gagcaggactttgtggaggtcctggagctggacaggccaccgtcgcagatgaggcgcagc
gagacaccgtccctaccccccacccacacccccagcctgcaagggagcatggtctccata
ggaccagtgggtaggcaggccaaacaccccatccccactgccctgtccctcaacagccct
gcggggggtaaatcctatgtccaccccaacggccagagccagtaccacacgcccccccag
cagtactcccccggccggcctgctatggtgccactccactaccctccgtgcagtgtgagc
cttgagcagaggggactgggagaagaaaggcactacggccccccaccctcccgaggcacc
ccacctatgggtctgatgtatggggagagggcgtacgtcaccacccagcggcccagccac
tctccggagaaggccctcatgaacaactcctatgccaccacccacaggcagcctcccagc
tcagcccagcccccccgcaccatacagcagctggacagccctggtagtaacgcctccaca
tacctgcgtcagcccacacggctcacctccactgcagccgcctatccggtgtaccctcct
gttgactataacaggtacgaggggcgcaggagaggggagcagaccccgccctacctgccc
gaggggccaggccggggaggggcagcggaggtgcagccgtggaggcagcaggaaggtggt
gacatgtcacgtgccctgggaggtgtaccccgctcccccagcttccaaagggcccagatg
tcccccgtgcaggagttcaccttccctgatggcctggctcactacaggacacagttccac
gagcagcagcaacagcccaccatgaggcagcagctccccccgctgttcggaggaccacac
tacaggcacgcaccagaggcgttcaccatgcaggagtctatgttgctgtga
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