Oncorhynchus mykiss (rainbow trout): 110500136
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Entry
110500136 CDS
T07259
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110500136 (fbxo18)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110500136 (fbxo18)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110500136 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
F-box-like
F-box
AAA_19
Viral_helicase1
AAA_30
PhoH
AAA_11
AAA_22
ResIII
rve_3
AAA_7
RFC1
Motif
Other DBs
NCBI-GeneID:
110500136
NCBI-ProteinID:
XP_021432997
Ensembl:
ENSOMYG00000037901
LinkDB
All DBs
Position
21:complement(26112142..26134120)
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AA seq
1028 aa
AA seq
DB search
MMESSTKGKAKRRHLNSEECREISRRPEGSQPLTQPHSVTRRHSNSDTNRGLYPRTPTKR
KRDARDDKKQHGITKFFPVISVVKVLSPQKAALSQGSGSIKTEGLNRELIPKNETIEEKA
LATSMKEEPEDEKVDYLEGLTTDMFGDDKEFERCWSDPDPALMNHHEEEVEALPDALYGL
LGSSRGLAHPQGHVDDLPEEVLMLVLSLLPAEDLYCNVSLVCQRWRNIVTQSLFVPWKKL
YYRYTKKEIDAVKEINAILETHRIIKDDQESILHIVEFMAQYKPSQKVKPESVLQSVRTH
CLFPQAEACIKHRLPKLEGIEGGPNPWAAMALMLVLCDGVGDVLDLVVCLRGCLPSASAI
TEYLSAMATMLLAMRRNDINISNRWHYNIFYVLHLMENALPTAITNQSGRAQVQVTHEQQ
QILNHDIHRDHVVKIMAFAGTGKTTTLIRYAQQRPHHHFLYMAFNKSVATQAQRCFPSNV
DCRTVHSMAFGAVGKRYQELKKLSSNVKPFSVAWVLPKGSGGFVNAKVVTLTLNAYMASA
DTHITPNHVPNTYKNTHGKMTVPDCNAKRMFARDAQRIWDKMVALEETREYAHHMTHDGY
LKLWQLQRPTLDKYDVIFIDEAQDCTPAIMDIMLPQHCGKILVGDPHQQIYTFRGAVNAL
NLVEHTHLYYLTQSFRFGSEIAYIGATILQVCKKVKKILVGGKQDGCVWGKAVDSLRPLT
TGLSPGRGKLAVLSRSNVTVFDQAVRLTDANPRCRLHIVGGVENFGLKRIMDIWVLMQPE
NNRSRGIKDSFIRRFTQHCLGGYFGLKSYAKKTEDRELEGKLSMVEKYNSRIPELVERLY
GCTEREAQHADFILGTVHKSKGLEFDTVVITDDFAKVPCAAHNLPRLSSCSGGDVPDDEW
NLLYVAVTRAKSSLVITKNITNILTLAGEYFLRTELTSALLTEGQPPCCSVRECHNHIMP
VWPLAMCKLPLQYMDSADDGGPMCGACVLQRVGPTASLLASPELLKVLPVTEERLNLPIN
YALLMALF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcgtccactaaaggaaaagccaagcgaaggcacctgaactcagaggagtgt
cgtgaaattagtaggagaccagagggcagccaacccctcacacagccccactccgtcact
cgtaggcacagcaactcagacaccaaccggggtttgtaccccagaacacccacaaagaga
aagagagatgcacgtgatgacaagaagcagcatgggatcactaagtttttccctgtgatc
agtgtggtcaaggtgttaagtcctcagaaagcagccctgtcccagggctcaggttccata
aagacagagggactcaatagagagctcatccccaaaaatgagactattgaggagaaggca
ctagccacctctatgaaggaggaacctgaggatgagaaggtggactatctggaggggctg
acaacagacatgtttggggacgacaaggagtttgagcgctgttggtcagatccagaccca
gccttaatgaatcatcatgaggaggaggtggaggccctgcctgacgccctctacggcctc
ttgggaagcagcaggggcctggcccatccccagggtcacgtggacgacctcccagaggag
gtgctgatgctggtgttgagcctcctgcctgctgaggacctctactgtaacgtcagcctg
gtctgccaacgctggaggaacattgtgacccagtcactgtttgtgccctggaagaagctg
tattaccgctacacgaagaaggagatcgacgccgtgaaggagatcaacgccatcctggaa
acccatagaatcataaaggacgaccaggagagcatcctccatatagtcgagttcatggcc
cagtataagcccagtcagaaggtgaagcctgagtcagtgttacagagtgtgaggacacat
tgtctgttccctcaggctgaggcctgcattaaacaccgactccccaaattggagggtatc
gaggggggccctaacccgtgggcagccatggccctgatgctggtgctgtgtgacggtgtg
ggagatgttctggacctggttgtctgtctcagaggctgtctcccttcagccagcgccatc
acggagtacctcagcgccatggcaaccatgctgctcgccatgaggaggaacgacatcaac
atcagcaacaggtggcactacaacatcttctatgtccttcacctgatggagaatgccttg
cccacagcaataaccaatcagagtgggagagcccaagttcaggtgacccacgaacagcag
cagatcctcaaccatgacatccatagagaccacgtggtcaagatcatggccttcgcaggc
acagggaagaccaccaccctgattcggtacgcccagcagaggccacaccaccacttcctc
tacatggccttcaacaagtctgtggctacccaggcccagcgctgtttccccagcaacgtg
gactgcaggacggtccactccatggccttcggggccgtcggaaagaggtaccaggagcta
aagaagttgtctagtaacgtgaagcccttctctgtggcctgggtgctgcctaagggcagc
gggggctttgtcaacgccaaggtggtcaccctgaccctcaatgcctacatggcctcggcc
gacacacacatcacccccaaccacgtcccaaacacgtacaaaaacacacatggcaaaatg
accgtgcctgactgcaatgcaaaaaggatgtttgcgagggatgcccagaggatctgggac
aaaatggttgccttagaagagaccagggagtacgcacaccacatgacccacgatgggtat
ctgaagctgtggcagctgcagaggccgactctggacaagtatgatgtcatctttatagac
gaggcacaggactgtactccagccatcatggacatcatgctacctcagcactgtgggaag
atcctggtgggagaccctcatcagcagatctataccttcagaggagcagttaatgccctg
aacctggtggaacacacacacctctactacctcacccagagctttcggtttggttcggag
attgcctacattggagccacgattctccaagtgtgtaagaaagtgaagaagattctggta
ggaggaaaacaagacggctgtgtgtggggtaaggctgtggactcactgcgtcccctgact
acagggttgagtcctggccggggtaagttagcagtactgtctcgctctaacgtcaccgtg
ttcgaccaagcagtcagactcaccgacgcaaacccacgctgtaggctgcacatcgtaggg
ggggtggagaattttgggctgaaaagaatcatggacatttgggttctgatgcagccagaa
aacaaccgctctcgaggcatcaaggacagcttcatccgtaggttcacccagcattgtctg
gggggctactttggactgaagagttatgctaaaaaaacagaggaccgtgagttggagggc
aaactctccatggtggagaaatacaacagccgcatccctgagctggtggaacgcctctac
ggctgcacagagagagaggcccaacacgcagattttatcctggggacagtccataagtca
aagggtctggagtttgacacggtggtgatcactgatgactttgctaaggtcccctgtgcc
gcccacaacttacccagactttccagctgctcaggaggtgacgtcccagacgatgagtgg
aacctgctgtatgtggcggtgactcgggccaagagctctctggtcatcaccaagaacatc
accaacatcctcacacttgctggggagtacttcctgaggacagagttgaccagcgccctg
ctgaccgagggccagcccccatgctgctccgtgcgggagtgtcataaccacatcatgcct
gtctggcccctcgccatgtgcaagctgccactccaatacatggatagtgcagacgatgga
ggtcctatgtgtggggcgtgtgtgttgcagcgtgtcggccccacggccagtctcctagcc
tccccagaactgctcaaggtcctgccagtgaccgaggagcgcctgaacctgcccatcaac
tacgctttgctgatggctctcttctga
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