Oncorhynchus mykiss (rainbow trout): 110500219
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Entry
110500219 CDS
T07259
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
110500219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110500219
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
110500219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
110500219
NCBI-ProteinID:
XP_036813501
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Position
21:30750010..30807982
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AA seq
583 aa
AA seq
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MDDDFERRRELRRQKREEMRLEAERLAFQGSNEDEEEAARERRRRARQERMRGMGGEEPS
DSVVMTNSHSVTETVSVSSSSMTSSGGGDDDEQALLERMAKREERRQKRLMEALEREKDQ
NPGSDGNHGSGENTVEERSVGRRGRYQDNEEEVEERNCRKEEEGEAAPEEEEAEQGEEEA
DEEVVEEEKPRQSYMREQEDTEEQAVVLNEVEESEAEVEENAALSDKVEEEVEEPDQLEV
EGTTVTLNNETEEDCRMSTIQNGLDGVNEKQNGGLHEETPQKHKKTERTLSRGSVRSPAA
GAEEQDDTAPLEAELKLEELKRRRDDAESEEFERMRRKQQEAEQELEELKKKREERRKII
EEEERQKKQEEAEKKDREEEEKRRMKEEIERRRAEAAEKRQQMGVETVDAEAKPFKCFSP
RGSSLKIGERAEFLSKSAQKSTVKSTHSPVVSKIDNRLEQYTSVAQNKDMRSPRSGAVDL
PMVTDGIRNIKSMWEKGSVFNSPGGGGGTYKEAAGMKIGVAGRINDWLNKTPESKTPGGR
PADLKPGDVTNKRSLWENKGSSPAKVTGRGENKSVANAGMGHE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgactttgagcggcgccgagagctcaggaggcagaagagggaggagatgcgc
ctggaggctgagcgattggcctttcagggtagtaatgaggatgaggaggaggctgcaagg
gagcgtagacgcagggcgcgtcaggagaggatgagagggatgggaggcgaggagcccagt
gacagcgtggtgatgaccaacagccatagtgtgacagagacggtgtctgtgtcctcctcc
tctatgacctcctcgggtggaggagacgatgatgagcaggccctgctggagcgcatggcc
aaacgagaggagcgcaggcagaaaagattgatggaagctctggagcgagagaaggatcag
aaccccggcagtgacggtaaccacggcagcggggagaatactgtggaggagaggtccgtc
ggccgcaggggccgttaccaggacaacgaagaagaggtggaagagcggaactgccgaaag
gaggaggagggggaggctgctccggaggaggaagaggctgagcagggagaggaagaagcg
gatgaagaggtggtggaggaggagaaaccgagacagtcctatatgagagaacaggaagat
acagaagagcaagcagtggttttaaatgaggttgaggaatcagaggcagaggttgaagaa
aatgctgcattaagtgataaggtagaggaagaagtagaggaaccagatcagttagaggta
gagggcacaacagtgaccctgaacaatgagactgaggaagactgtcggatgtcaaccatc
caaaacggcttggatggggtgaatgaaaagcagaatggaggtctgcacgaggagactcct
caaaaacacaaaaaaacagaaaggacactgagccgcggcagcgtgcgctccccggcggcg
ggggcggaggagcaggacgacacggcgcccctggaggcggagcttaagctggaggagctg
aagcgccgccgtgacgatgcggagagcgaggagttcgagaggatgagacggaagcagcag
gaggctgagcaggagctggaggagctgaagaagaagagggaggagaggaggaagatcata
gaagaggaggagagacagaagaaacaggaggaggccgagaagaaggacagagaggaggag
gagaagaggaggatgaaggaagagatagaaaggagaagggcggaggcggccgagaagaga
cagcagatgggggtggagactgtcgacgcagaggccaaacccttcaaatgcttcagtccc
agaggatcctccctcaagattggtgaaagggcagagtttctgagcaagtcggcacagaaa
agcacggtgaagtcaactcactctcctgtcgtctctaagattgacaacagactggagcag
tacacctctgttgcccagaacaaggatatgcggtccccacgctccggtgccgtggacctg
cccatggtgacagatgggatacgcaacattaagagcatgtgggagaaaggcagcgtgttc
aactcgcccgggggcggcgggggcacgtacaaggaagcagctgggatgaagataggtgtg
gcgggccgcatcaacgactggctgaataaaacccccgagagcaaaacgccaggaggaagg
cccgcggacctaaagccaggagatgtgaccaacaagagaagtctgtgggaaaacaagggc
tcctccccagccaaggtgactggcagaggggagaataaatctgttgccaacgcaggtatg
ggacacgaatga
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