Oncorhynchus mykiss (rainbow trout): 110500263
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Entry
110500263 CDS
T07259
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110500263
03015 mRNA surveillance pathway
110500263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110500263
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110500263
mRNA cycle factors
P-body specific factors
110500263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110500263
NCBI-ProteinID:
XP_036813564
Ensembl:
ENSOMYG00000014282
LinkDB
All DBs
Position
21:32473981..32494341
Genome browser
AA seq
1281 aa
AA seq
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MLAEGKRSLNMDEKEVSSFSNKEKDREGDRRPASSRDKVKDEAKMSGKKDIGKAAEEKRR
RLEEDKRKKEEKERKRKEEEKQKAEEEQRMKEEEEKKQQEEQERKVQEEEAKRQREEEAA
QLKEKEEGHQLHQEAWERHQCRKELRIRNQNAHEGRPEETFFSRLDSSLKKNTAFVKKLR
TLTEQQREALSNDFGSLNLSKYIGEAVGSVVEAKLKISDVGCAVHLCSLFHQRYAEFAPL
LLQAWKRHFEARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGTDR
ETHTHVSVVISFCKHCGDDIAGLVPRKVKAAQEKFGLAFPPSEIINTEKQQPFQNLLREY
FTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQSLADF
LDENMPELPLDKTVQEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENMVDLKAFVP
AILFKDNEKGKDKEEAAGKEAKDAAATTEELELELESLDIADDPLELDGPDEAENEAELA
KKLLDEQGKDEEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSN
RRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVADDLCSILKGDFRFHIRKKDQINI
ETKNKTVRFIGELAKFKLFSKTDTLHCLKMLLSDFSHHHIEMACTLLETSGRFLFRSPDS
HLRTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPMEKTVRKKRPPLQEYIRKLLY
KDLSKVTTEKVLRQMRKLPWQDPESKGYLICCMVNIWNIKYNSIHCVANLLAGLVAYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLFSFISFG
VNPDGSPSPLDPPEHLFRIRMVCTLLDTCGQYFDRGSSKRKLDCFLIYFQRYIWWKKSVE
VWSAEHQFPIDIDYMISDTLELLRPKMKLCISLEDSTRHVTELEREFLVKLGLAMDGQKD
GRPSSAMGSEGEALDEDDEDDDEEGGADTEEQSGNESEMNEPEEEEGSENEEEEREEEEE
ENTDYLTDSNKENETDEENNEVTIRGGGLKHVACAEDEDFIQALDKMMLENLQQRSGEAV
KVHQLDVAIPLQLKSQLKKGPGGPVCSGEGDGGISDTMQFVMLTRKGNKQQFKILNVPLS
SHLAANHFNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMASLAQRPAPANTNRERRPR
YQHPKGAPNADLIFKTGGRRC
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgagggcaagagatcattaaacatggatgagaaagaggtgagctcctttagt
aacaaggagaaagacagagagggtgatagacggcccgcctcctcccgggataaagtgaag
gatgaggcaaagatgagtggcaagaaagatatcggtaaggccgcagaggaaaagaggagg
agacttgaggaggacaaaagaaagaaggaagaaaaggagcggaaacggaaagaggaggag
aaacagaaggcagaggaggagcagaggatgaaggaggaagaggagaagaaacagcaggag
gagcaggagaggaaagttcaggaggaggaggccaagagacagcgtgaagaggaggcagct
caactcaaggagaaggaagagggtcaccagctccaccaggaggcctgggagcgccaccag
tgccggaaggagctgcgcatccgcaatcagaacgcccacgagggccgtcccgaggaaacc
ttctttagccgccttgactccagcttgaagaagaacacggccttcgtcaagaagctgcgc
acgctcactgagcagcagcgtgaagccctctccaatgacttcggctcgctcaacctcagc
aagtacatcggcgaggcggtgggctcagtggtggaggccaagctgaagatctctgatgtg
ggctgcgctgtgcacctgtgctccctctttcaccagcgctacgctgaattcgccccattg
ctcctccaggcctggaagaggcactttgaggcgcgcaaggaggagaaggcgcccaacgtg
agcaagctgcgcaccgacctgcgcttcatcgcagagcttaccatcgtgggcctgtttacg
gacaaggagggcctttcgctcatctacgagcagctgaagagcatcattggaacagaccgc
gagacacacacgcatgtgtcggtggtcatcagcttctgtaagcactgcggggacgacatt
gcgggcctggtgcctcgcaaagtgaaggctgcacaggagaagtttggcctggccttccct
cccagtgagatcatcaacacggagaagcagcagcccttccagaaccttctgagggagtac
ttcacctcgctcaccaagcacctgaagaaggaccaccgcgagttgcagaacatcgagagg
cagaacaggcgtatcctccactccaaaggggagctgagtgaggacagacacaagcagtat
gaggagtttgctacatcctaccagaagttgctggctaacacccagtctctggctgacttt
ctggatgagaacatgccagaacttccactggacaagactgtgcaggaagagcacggtcct
ggcattgacatcttcacccctgggaagcccggggagtatgacctggaggggggcatctgg
gaggacgaggatgccaggaacttctatgagaacatggtggacctgaaggccttcgtcccc
gccatcctgttcaaagataacgagaagggcaaggacaaagaagaggctgctggtaaagag
gctaaagatgctgcggccaccacagaggagttggagttggagctcgagtctctagacatc
gctgatgaccctctggagctggatggacctgacgaggcagagaacgaggcagagcttgcc
aaaaaactattggacgagcaaggtaaagatgaagaacaagaggatgaggaggcaagcacc
gggtcccacctgaagctcatcgtggacgccttcatccagcagcttcccaactgcgtcaac
agagacctcatagacaaggctgccatggatttctgcatgaacatgaacaccaagtcaaac
aggaggaagctggtccgggctctcttcaccgttcccagacaaaggttggatctgctgcca
ttttactcccgtctggtggccacccttcacccctgcatgtcagatgtggccgatgacctg
tgctctatactcaaaggagacttcaggttccatatccggaagaaggaccagatcaacatt
gaaaccaaaaataaaactgtacggtttatcggggagctggcgaagttcaagctgttctct
aaaacggacactctgcattgtctgaagatgctgctgtcagacttctcccaccaccacata
gagatggcctgcactctgctggagaccagtggacgcttcctcttccgatcccccgactcc
cacctccggaccagcgtccttctggagcaaatgatgcgtaagaagcaggcgcagcacctg
gatgctcgctacgtgaccatggtggagaatgcctactactactgcaaccccccgcccatg
gagaagactgtcaggaagaagaggcccccgctgcaagagtacatccgcaaactgctctac
aaggacctctccaaggtcaccacggagaaggtgttgaggcagatgcgtaaactcccctgg
caggacccagagtctaaaggctacctgatctgttgcatggtcaacatctggaacatcaag
tacaacagcatccactgtgtggccaacctgctggccggccttgtggcctaccaggaggac
gtgggcatccacgtggtggatggggtcctggaggacatccgcctgggaatggaggtgaac
cagcccaagttcaaccagcgtcggatcagcagtgccaagtttctgggggagctctacaac
taccgcatggtggagtcagcggtcatcttccgcaccctcttctccttcatctcgttcggc
gtgaacccggacggcagccccagccccctggatccccccgagcacctgttccgcatccgc
atggtctgcaccctgcttgacacctgcggacagtactttgaccgcggctccagcaagagg
aagctggactgcttcctcatctacttccagaggtatatctggtggaagaagagtgtggag
gtgtggagtgcggagcaccagttccccatcgacattgactacatgatcagtgacaccctg
gagcttctccggcccaagatgaagctctgcatctccctggaagactccacacgacacgtc
accgagttggagagggagttcctcgttaaactgggactggccatggatggacagaaggac
ggccggccctccagtgccatggggagtgaaggcgaggccctagacgaggatgacgaggat
gacgacgaagagggaggggcggacacagaggaacagtctggcaatgagagcgagatgaac
gagccagaggaagaagaagggtctgagaatgaggaagaggagcgggaggaagaggaggag
gagaacactgactatctgactgactccaacaaggagaacgagacggacgaggagaacaat
gaggtgaccatccgtggtggcggtctgaagcatgtggcatgtgctgaggatgaggacttc
atccaggctctggacaagatgatgctggagaacctgcagcagcggagcggggaggcagtg
aaggtgcaccagttggacgtggccatccccctgcagctgaagagccagctgaagaaaggc
cctggaggacccgtctgctctggagagggagacggaggcatctcagacaccatgcagttt
gtcatgctcacgcgcaagggcaacaaacagcagtttaagatcctgaacgtgcctttatcc
tcccacctggctgccaaccacttcaaccagcagcaggcagagcaggaggagaggatgagg
atgaagaagctcactctggacatcaacgagagacaggagcaagaagactaccaagaaatg
atggcgtctctggcccagcggcccgctcctgccaacaccaaccgggagcggcgcccgcgc
taccaacaccccaaaggggcacccaacgccgacctcatcttcaagaccggaggaaggaga
tgctga
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integrated database retrieval system
