KEGG   Oncorhynchus mykiss (rainbow trout): 110500311
Entry
110500311         CDS       T07259                                 
Name
(RefSeq) ras-related protein Rab-39B
  KO
K07925  Ras-related protein Rab-39B
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110500311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110500311
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:omy04031]
    110500311
Membrane trafficking [BR:omy04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    110500311
GTP-binding proteins [BR:omy04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    110500311
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_22 TniB
Other DBs
NCBI-GeneID: 110500311
NCBI-ProteinID: XP_021433289
Ensembl: ENSOMYG00000036540
LinkDB
Position
21:37649502..37656152
AA seq 213 aa
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEPQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFQLVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaggcgatatggttgtaccagttcagactcatcgtcattggggactcgacggtgggg
aaatcgtgcctgatccggcggttcacggagggaaggtttgcccaggtgagtgacccgacg
gtcggcgtggatttcttctctcgcctggtggagatcgagccggggaaacgcatcaagcta
cagatctgggataccgcgggacaggagcgcttcaggtccatcaccagagcctactatcgt
aactcggtgggcgggctcctcctgtttgacatcacaaaccgccgttccttccagaatgtt
catgattggctagaggaggcccggagccacgtacaaccacacagcattgtgttcctattg
gtcggccacaagtgtgacctggaacctcagcgccaggtaactcgtcaggaggctgagaaa
ctcgccggcgcctacgggatgcgttacgtagaaacttcggcccgcgacgccataaacgtg
gagcacgccttcacggagctgaccagggacatctttcagctggtgaggagcggtgacatc
actatccaggagggttgggagggggtgaagagcggcttcgttcccaacgtggtccactcc
tccgaggaggtcaccaagagcgaccgacgctgcctctgctga

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