Oncorhynchus mykiss (rainbow trout): 110500384
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Entry
110500384 CDS
T07259
Name
(RefSeq) dynactin subunit 1 isoform X3
KO
K04648
dynactin 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04814
Motor proteins
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110500384
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110500384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110500384
03036 Chromosome and associated proteins [BR:
omy03036
]
110500384
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110500384
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110500384
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
110500384
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
110500384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
110500384
NCBI-ProteinID:
XP_021433400
Ensembl:
ENSOMYG00000009650
LinkDB
All DBs
Position
21:39828322..39856505
Genome browser
AA seq
1256 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGSSATSPDTPEAATAKFLPKQKDIPETPKSVKQMPIPK
KFVTRRSTKTPRVLATPASGLSSSLSREDVSEGSLSSKGALGAPVVPLPSGTPTTPGAPP
PATPSKAEPPVAKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKYKIQLEQLQEW
KSKMQEQQADLQKQLKEAKKDAREALESKDRYMEEMSDTADAIEMATLDKEMAEERSESL
QVEVESLKEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLS
SSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVE
TLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQK
RVEAAQETVADYQQTINKYRELTTSLQDTNRELTIAQNANAEQVQQPPAELFDFKIKFAE
TKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAEL
ISKQAQEKFDLNGNPVERTGMKMRGPPGEQLSFASGLVYSLTLLQATLHKYEQSLNCCSV
EVYKRMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLADQT
EDCTVQLADHIKFIQSALDCMGAEVVRLRAFLQPGQEGADLNILLKDLDTSCSDIKQFCK
KIRRRMPGTDVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQE
GLNTLKLEDVAFKAVEQVYGSHGLNPHECLRQSCSSVISTMNKMATAMQEGEYDAERPQG
KTPPVEARAVALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKK
LDTSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSN
QSKVTIEGLRAPPASGIASIVSGTAGAGVAPAAGGLSGPMQVVDSPLLRQQVETQRLGIK
HLKNENNRLKAEKMRAQLASLPPLHVPKLPLREASTSPPAEGPLHGALYRKTDQLLGTLL
KMSAAVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVSEHVVSQQPGAKVSSD
FATFPISSFVKAKEEKQGGTVFIGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagacgggggcggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggtcagcgtggcacggtggcttacgtgggcgccacgctcttcgccactggtaagtgg
gtgggcgtgatcctggacgagcccaagggcaagaacgacggcacggtccaggggaagaga
tactttcagtgtgatgagaactgtggtatctttgtgcgccagtcccagatccagctagtg
gaagatggatccagtgccacctccccagacaccccagaggcggccactgccaagttcctg
cccaagcagaaagacattcctgagactccgaaatcagtcaaacagatgcccattcccaag
aagttcgtaacccgccgtagtaccaagaccccccgagtcttagccaccccggcctctggt
ctgtccagctctctttccagggaggatgtcagtgagggcagcctgtcttccaagggtgca
ctgggggctcccgttgtccccctgcccagcggcacccccaccacgcccggtgctcctccc
cctgccacccctagcaaggctgagcctcccgtagcgaagcaggaggaggagtctctgcga
ggtcaggtgaaggatctagaggagaagctggagaccctgaagatgaagcgggcagaggac
aaggtcaagctgaaggagctggagaagtacaagatccagctggagcagctgcaggaatgg
aagagcaagatgcaggagcagcaggccgacctgcagaaacaactcaaggaggccaagaag
gatgctcgggaggccctggagtctaaggaccgctacatggaggagatgtcagacacggcg
gacgccatcgagatggccacactggacaaggagatggccgaggagcggtcggagagcttg
caggtggaggtggagtcactgaaggagaaggtggaggagctcaccatggacctggagatc
atcaaacacgaggtcgaggagaaaggttctgatggagctgcctccagttaccatgtcaag
cagctggaggagcagaacagcagactgaaagaggctctggtcaggatgcgtgacctgtct
tcctctgagaagcaggagcatgtgaagctccagaagcagatggagaagaagaatggagag
ctggagactctgaggacccagaaggagaagctacaggaggagatgaagcaggctgaggcc
accattgatgagctgaaggagcaggttgatgctgctctcggggcagaggagatggtggag
actctgactgagaggaatctggacctggaggagaaagtacgagagctcagagagactgtc
acagacctggaagcgataaacgagatgaatgacgagctgcaggagaacagcagggagacg
gagatggagctgagggagcagctggacctgaacggggctagggtgagagaggcccagaag
agggtggaggccgctcaggagacggtggctgactatcagcagaccatcaacaagtatcgc
gagctcaccaccagcctacaggataccaacagggagctgaccattgctcagaatgccaat
gcagagcaggtccaacagcctcctgctgagctgtttgacttcaagatcaagtttgctgag
accaaagcctacgccaaggccatcgagatggagctgagaaagatggaggtgggccaggcc
aacagacaggtgtctctcctcacctccttcatgcccgactccttcctgcgtcatggagga
gaccacgactgtattctggtgctcttgctcataccaagactaatttgcaaggctgagttg
atcagcaagcaggcccaagagaagtttgatctgaatggtaacccagtggagaggactggg
atgaagatgagaggaccacctggagaacaactcagctttgcctctggactggtgtattct
ctaaccctgctacaggccacgctgcacaaatatgaacaatctctgaactgctgcagtgtg
gaggtgtataagcggatggggactctctactcagagatgagtgtccatgagcgttcccta
gacttctttatagacctgctgcacaaagaccagctggatgagactgtacacgtggagcct
ctcaccaaggccatcaagtactaccagcaactgtacagcatccacctggctgatcagact
gaagattgcactgtgcaactggctgatcacatcaagttcatccagagtgcattggactgt
atgggtgcagaggtggtgcgtctcagggccttcctgcagccggggcaagagggggctgac
ctgaacatcctgctgaaggacctagacacatcctgcagcgacatcaaacagttctgcaag
aagatcagacgcaggatgccagggaccgacgtgccaggggtgcccgccgctctggccttt
ggcgcaccggtgtcggagactctaacggactgcaggcgtcagctgactcgggtggttgcc
gtgctacaggaggtagctgcggcgggggcgcagatggtcgcccctctaggagaacaggag
gggctcaacaccctcaaactggaggacgtggccttcaaggctgttgaacaggtgtatggg
tcccatggcctgaatccccatgagtgtctgcgtcagtcctgcagctctgtcatctccacc
atgaacaagatggctaccgccatgcaggagggagagtatgacgccgagcgaccacaggga
aagacacccccggtagaggctcgtgcagtggccctcagggcagagatcactgacgcagag
ggtctgggagtcaaactggaggacagagacactgtcatcaaggagctcaagaagtccctg
aagatcaaaggagaggagttgagtgaggcccacgtccgtctcagcctgctagagaagaag
ctggatacgtccactaaagatgcagacgaacgtgtggagaagatccagaccaaactggat
gagaccctcgccctgctcaagaagaaagagaaggagtttgaggaaaccatggacgccctg
caggcagacatcgaccagctggaggcagagaaagcagagctgaagcagcgtctctccaac
cagtcaaaggtgaccattgagggcctcagggccccgcctgcctctggcatcgcatccatc
gtctcaggaaccgccggagcgggtgttgccccagcagcagggggcctgtctgggccgatg
caggtggtggactcccctctcctccgtcagcaggtggagacccagagactgggcatcaaa
cacctgaagaatgagaacaacagactgaaggcagagaagatgagagcccagttagcctcc
ctccctcccctccacgtccccaagcttcctttgagagaggcctccacctctccccctgct
gaggggcctctccacggggctctctacaggaagacagaccagctcctggggaccctgctc
aagatgagtgccgccgttaaggtggtcgacatcaccgggaagactccagtgagtgcgagt
gctcagctcctggaccagacagctcgactgcagtctctgagtgacgctctggacaaactg
aagggtgaagtgtcagagcatgtggtttctcagcagcctggggcgaaggtctcctctgac
tttgccaccttccccatttcctccttcgtcaaggccaaggaggagaagcaggggggtacg
gtgttcatagggcgcgtggccatcccatgtgccaagggccaggagcaggtgcaccgtctt
gtcctatcacagcagcacctgcagcaagtgcaccgcctcctcatgacctaa
DBGET
integrated database retrieval system