KEGG   Oncorhynchus mykiss (rainbow trout): 110500384
Entry
110500384         CDS       T07259                                 
Name
(RefSeq) dynactin subunit 1 isoform X3
  KO
K04648  dynactin 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04814  Motor proteins
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    110500384
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110500384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110500384
   03036 Chromosome and associated proteins [BR:omy03036]
    110500384
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110500384
Membrane trafficking [BR:omy04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    110500384
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     110500384
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     110500384
SSDB
Motif
Pfam: Dynactin CAP_GLY
Other DBs
NCBI-GeneID: 110500384
NCBI-ProteinID: XP_021433400
Ensembl: ENSOMYG00000009650
LinkDB
Position
21:39828322..39856505
AA seq 1256 aa
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGSSATSPDTPEAATAKFLPKQKDIPETPKSVKQMPIPK
KFVTRRSTKTPRVLATPASGLSSSLSREDVSEGSLSSKGALGAPVVPLPSGTPTTPGAPP
PATPSKAEPPVAKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKYKIQLEQLQEW
KSKMQEQQADLQKQLKEAKKDAREALESKDRYMEEMSDTADAIEMATLDKEMAEERSESL
QVEVESLKEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLS
SSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVE
TLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQK
RVEAAQETVADYQQTINKYRELTTSLQDTNRELTIAQNANAEQVQQPPAELFDFKIKFAE
TKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAEL
ISKQAQEKFDLNGNPVERTGMKMRGPPGEQLSFASGLVYSLTLLQATLHKYEQSLNCCSV
EVYKRMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLADQT
EDCTVQLADHIKFIQSALDCMGAEVVRLRAFLQPGQEGADLNILLKDLDTSCSDIKQFCK
KIRRRMPGTDVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQE
GLNTLKLEDVAFKAVEQVYGSHGLNPHECLRQSCSSVISTMNKMATAMQEGEYDAERPQG
KTPPVEARAVALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKK
LDTSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSN
QSKVTIEGLRAPPASGIASIVSGTAGAGVAPAAGGLSGPMQVVDSPLLRQQVETQRLGIK
HLKNENNRLKAEKMRAQLASLPPLHVPKLPLREASTSPPAEGPLHGALYRKTDQLLGTLL
KMSAAVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVSEHVVSQQPGAKVSSD
FATFPISSFVKAKEEKQGGTVFIGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq 3771 nt   +upstreamnt  +downstreamnt
atgagtgcagacgggggcggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggtcagcgtggcacggtggcttacgtgggcgccacgctcttcgccactggtaagtgg
gtgggcgtgatcctggacgagcccaagggcaagaacgacggcacggtccaggggaagaga
tactttcagtgtgatgagaactgtggtatctttgtgcgccagtcccagatccagctagtg
gaagatggatccagtgccacctccccagacaccccagaggcggccactgccaagttcctg
cccaagcagaaagacattcctgagactccgaaatcagtcaaacagatgcccattcccaag
aagttcgtaacccgccgtagtaccaagaccccccgagtcttagccaccccggcctctggt
ctgtccagctctctttccagggaggatgtcagtgagggcagcctgtcttccaagggtgca
ctgggggctcccgttgtccccctgcccagcggcacccccaccacgcccggtgctcctccc
cctgccacccctagcaaggctgagcctcccgtagcgaagcaggaggaggagtctctgcga
ggtcaggtgaaggatctagaggagaagctggagaccctgaagatgaagcgggcagaggac
aaggtcaagctgaaggagctggagaagtacaagatccagctggagcagctgcaggaatgg
aagagcaagatgcaggagcagcaggccgacctgcagaaacaactcaaggaggccaagaag
gatgctcgggaggccctggagtctaaggaccgctacatggaggagatgtcagacacggcg
gacgccatcgagatggccacactggacaaggagatggccgaggagcggtcggagagcttg
caggtggaggtggagtcactgaaggagaaggtggaggagctcaccatggacctggagatc
atcaaacacgaggtcgaggagaaaggttctgatggagctgcctccagttaccatgtcaag
cagctggaggagcagaacagcagactgaaagaggctctggtcaggatgcgtgacctgtct
tcctctgagaagcaggagcatgtgaagctccagaagcagatggagaagaagaatggagag
ctggagactctgaggacccagaaggagaagctacaggaggagatgaagcaggctgaggcc
accattgatgagctgaaggagcaggttgatgctgctctcggggcagaggagatggtggag
actctgactgagaggaatctggacctggaggagaaagtacgagagctcagagagactgtc
acagacctggaagcgataaacgagatgaatgacgagctgcaggagaacagcagggagacg
gagatggagctgagggagcagctggacctgaacggggctagggtgagagaggcccagaag
agggtggaggccgctcaggagacggtggctgactatcagcagaccatcaacaagtatcgc
gagctcaccaccagcctacaggataccaacagggagctgaccattgctcagaatgccaat
gcagagcaggtccaacagcctcctgctgagctgtttgacttcaagatcaagtttgctgag
accaaagcctacgccaaggccatcgagatggagctgagaaagatggaggtgggccaggcc
aacagacaggtgtctctcctcacctccttcatgcccgactccttcctgcgtcatggagga
gaccacgactgtattctggtgctcttgctcataccaagactaatttgcaaggctgagttg
atcagcaagcaggcccaagagaagtttgatctgaatggtaacccagtggagaggactggg
atgaagatgagaggaccacctggagaacaactcagctttgcctctggactggtgtattct
ctaaccctgctacaggccacgctgcacaaatatgaacaatctctgaactgctgcagtgtg
gaggtgtataagcggatggggactctctactcagagatgagtgtccatgagcgttcccta
gacttctttatagacctgctgcacaaagaccagctggatgagactgtacacgtggagcct
ctcaccaaggccatcaagtactaccagcaactgtacagcatccacctggctgatcagact
gaagattgcactgtgcaactggctgatcacatcaagttcatccagagtgcattggactgt
atgggtgcagaggtggtgcgtctcagggccttcctgcagccggggcaagagggggctgac
ctgaacatcctgctgaaggacctagacacatcctgcagcgacatcaaacagttctgcaag
aagatcagacgcaggatgccagggaccgacgtgccaggggtgcccgccgctctggccttt
ggcgcaccggtgtcggagactctaacggactgcaggcgtcagctgactcgggtggttgcc
gtgctacaggaggtagctgcggcgggggcgcagatggtcgcccctctaggagaacaggag
gggctcaacaccctcaaactggaggacgtggccttcaaggctgttgaacaggtgtatggg
tcccatggcctgaatccccatgagtgtctgcgtcagtcctgcagctctgtcatctccacc
atgaacaagatggctaccgccatgcaggagggagagtatgacgccgagcgaccacaggga
aagacacccccggtagaggctcgtgcagtggccctcagggcagagatcactgacgcagag
ggtctgggagtcaaactggaggacagagacactgtcatcaaggagctcaagaagtccctg
aagatcaaaggagaggagttgagtgaggcccacgtccgtctcagcctgctagagaagaag
ctggatacgtccactaaagatgcagacgaacgtgtggagaagatccagaccaaactggat
gagaccctcgccctgctcaagaagaaagagaaggagtttgaggaaaccatggacgccctg
caggcagacatcgaccagctggaggcagagaaagcagagctgaagcagcgtctctccaac
cagtcaaaggtgaccattgagggcctcagggccccgcctgcctctggcatcgcatccatc
gtctcaggaaccgccggagcgggtgttgccccagcagcagggggcctgtctgggccgatg
caggtggtggactcccctctcctccgtcagcaggtggagacccagagactgggcatcaaa
cacctgaagaatgagaacaacagactgaaggcagagaagatgagagcccagttagcctcc
ctccctcccctccacgtccccaagcttcctttgagagaggcctccacctctccccctgct
gaggggcctctccacggggctctctacaggaagacagaccagctcctggggaccctgctc
aagatgagtgccgccgttaaggtggtcgacatcaccgggaagactccagtgagtgcgagt
gctcagctcctggaccagacagctcgactgcagtctctgagtgacgctctggacaaactg
aagggtgaagtgtcagagcatgtggtttctcagcagcctggggcgaaggtctcctctgac
tttgccaccttccccatttcctccttcgtcaaggccaaggaggagaagcaggggggtacg
gtgttcatagggcgcgtggccatcccatgtgccaagggccaggagcaggtgcaccgtctt
gtcctatcacagcagcacctgcagcaagtgcaccgcctcctcatgacctaa

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