Oncorhynchus mykiss (rainbow trout): 110500447
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Entry
110500447 CDS
T07259
Name
(RefSeq) RNA-binding protein 4B isoform X1
KO
K13189
RNA-binding protein 14
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110500447
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110500447
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
110500447
NCBI-ProteinID:
XP_036813753
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All DBs
Position
21:complement(41920300..41933484)
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AA seq
639 aa
AA seq
DB search
MDKSNTVKLFVGNLALDTTQEELSAIFESYGQVVSCSVLRQFAFVHLQGEGAAERAISEL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKARLS
SSAGYAFVHMENKEEALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQG
HYAGECPVGKPSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTG
HTAGTRTDGNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYARSMNP
SHAALYSQLSQIAASPAAAYSTPVYAHAMANHHHHPGAVYLAAPGVEMPTTAAAINQAYA
LAPALYGGAQHAYGHMGMGAMSVSADPSAAIFEAARVQHYFAQGQQVLAEQQNAAAAQAA
KSGERDRSPLRRSAGSLLPDPVMKPFMYQRAPKQRRPLLPTPAGRAAEEEAEAAEDPMTR
DQCQQYAEYYQQQHQQYQQLQQLQEQYQQYAEYYQQQHQQYQQLQQLQYYAEYYQQYQQY
QQLQQYQQLQQLQYAYPPPNHHAMAAIPAHAIAGHAHHHGQPGHVTALDSALRPVVPASA
MVAVPRVYESPLPPPPNRKEAVLRRAPELSLHTPEPPFR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctcttcgtgggcaacctggctctggacaccacccag
gaggagctgtcggccatctttgagtcgtatggccaggtggtcagctgcagcgttctccga
cagttcgccttcgtacacctacagggcgagggggctgcagagcgggccatcagtgagctg
aacggcagggagttccgtgggaggaacctggtggtggaggagtcccggggcagaccgctc
cactccaccaaggtgtttgtgggcaacctgtcgggcatgtgcaccactgaggacctccag
gagctcttccagaccttcggcaaagtactggagtgcgacaaggtcaaagccaggctctcc
tcttctgcaggatacgcctttgtgcacatggagaataaggaggaggctctacaggccatc
gaggccctccacggcacctccttcaagggacgcccgctctccgtggagctctccaaggta
cagccctctaagcaaacccccaccgggaagatcccctgtgtgagctgtgggaagcagggc
cactatgctggggagtgccctgtagggaagccctctctggaacagtaccagagccaggca
gctgtgttagctgcagccgccgccgccgcagccggcctccccctccaggtccagcagagc
gtccacaactctgtctacaacacctcgacctttgaccccacttacgcggcgctgacgggc
cacaccgccggcacgcggacggacggcaaccccgtcaaccaggcagtgtacggtgccctg
gcgacgcaggtctacggcgccaacgtggccaatcagctctacggagtccaggcagcaaat
caggcggcggcgttgacgcaggcgggcgccacgcaggtgtacgccaggtccatgaacccc
agccacgccgccctctacagtcagctcagtcagatcgctgccagccccgccgctgcctac
tccacacccgtctacgcgcatgccatggccaaccaccaccaccacccaggggccgtgtac
ctggcagcccctggcgtagagatgcctacgaccgctgctgccatcaaccaggcctacgcc
ttggcaccggcgctctatggcggcgcccagcatgcctacggtcacatggggatgggagcc
atgagcgtgtcggcggacccgtcggcggccatttttgaggcggcgagggtgcagcactac
ttcgcccagggacagcaggttctggccgagcagcagaatgcggcggcggcccaagcggca
aagtccggggaaagggaccggagtcccctgaggcgctcggcggggtccctgctgcccgac
ccggtcatgaagcccttcatgtatcagagagcgcccaagcaacgccggccgctgctcccc
acccccgctgggcgagctgcagaggaggaagcggaggctgcggaggaccccatgactaga
gaccagtgtcaacagtacgctgagtactaccaacaacagcaccaacagtaccagcagctc
cagcagctacaagagcagtaccaacagtatgctgagtactaccaacagcaacaccaacag
taccagcagctgcagcagttacagtactatgcagagtattaccagcagtaccaacagtac
cagcaactccagcagtaccagcaactccaacagctccagtacgcctacccacctcccaac
caccacgccatggccgccatccctgcccacgccattgcgggccacgcccaccaccacggc
cagcccggtcacgtcacggcgctggactccgccctcaggccagtggtgcccgcctccgct
atggtggcagtgcccagagtgtatgagtcgccgctgccgccgccaccgaaccgcaaggag
gccgtcctccgccgagcccccgaactctcccttcacacgcctgagcccccgttccgatag
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