Oncorhynchus mykiss (rainbow trout): 110500515
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Entry
110500515 CDS
T07259
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110500515
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110500515
Surveillance factors
Other surveillance factors
110500515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
Motif
Other DBs
NCBI-GeneID:
110500515
NCBI-ProteinID:
XP_036813821
LinkDB
All DBs
Position
21:complement(44050110..44097779)
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AA seq
1069 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFAAILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVMRLMGKGGGVAPAGMARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEVGFGRGAREIYRSQSWDDRGERRFEKPARAREGVR
VGLEEVTGVPVPGVPRKDYTRSDSENWRTLREEQEEEEGADPGGSWRLAGARRLDDGGPR
SAGWREHDGPVEGRRRKFEFDFGGGRRRAGSEGLDDDRDGLPEWCTDEEDGEMGTFDASG
AFLPLSKDEEFDFQGIEEEEESLSGMERIMNGGQRVDVKESASDGEVKNRTSPPSSSAPP
ALGLNPPMPQLSLTVAELEASQMADSHPLPAPAPLAVPVPAKASKMPSEVVPEGSPAEDS
TTQQSPSTSSSLPSPPPSASSSSAATHLPLPPGGDTEDDDGMKHLQQEAEKMVASLQDTS
LEEECFTQTLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMYEWFQAGYFSMS
LLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRPPPPRPQPLPPRGPAGNMDQDR
LKKQQQQDLAAAALYQQLQQQQQLFQLINRCGEQGMMPSVNRSMSVPDTGSMWDMHTSAS
QQSGGEASLWDLTMNSSTQGPTLEQLQKLQQERREAELRTKREEEEQRKRREEKRRQQEE
QKRREEEEIFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKPGAKGLSLLDM
QEAERLLKQQQRAQQQQRERHQGMSMGQWGDGGAVPGGLWGGGGGMEGKAGGGGAMGLWE
EAVKNQSRGGSMQGLKNSRSSPSLSEQYMLSRRKQRTDEEDKLLKLLQGIKTPQDGFTTW
CEQMLHALNTQANNTSSPLDVSTIVAYLKEVESPYEVLDFICSYLGDTMEAKEFAKQFLE
RRAKQKQNQKRQQEQLSKEVAGLTMNNFPLQDSMRGVNPSALQSMFQAAHMAKGGMYDAQ
GGMKKKKQPVMLQSDPSILGKTCPPQLIHTYDLLHTCYKRITSQCITSV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggcccagaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgcgatgccaaagtacaagctggccgagtatcgc
tacggcagagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagcgttgctgtgatg
aggctcatgggtaaaggaggtggagtcgcccctgcgggcatggcccgaggcagaggcacc
acacgaggaggaggccgagggcgaggccgaggagagagtggaggattctaccaaagaagt
attgaggagggagaggtgggcttcggccgcggagccagagagatctatcgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgcgcgtgccagggagggggtacgt
gttggattagaggaggtgacgggtgtacctgtgccgggggtgccgaggaaggactacaca
cggtctgacagtgagaactggcgtaccctcagagaggagcaggaggaagaggaaggggcc
gacccaggaggcagctggagactggccggagcacgtagattagatgacggaggcccaagg
tctgcaggctggcgggagcacgacggtccggttgaggggcgtcgcaggaagtttgagttt
gacttcggcggaggtcgcaggcgggccgggagcgaagggttagatgacgacagagacgga
ctgcctgagtggtgcactgatgaagaggacggagaaatgggcaccttcgacgcatccggc
gctttccttcctctatccaaggatgaggagtttgacttccaggggatagaggaggaggaa
gagagcctgtctggcatggagaggatcatgaatggaggacagagagttgacgtcaaagaa
tcagccagtgacggggaggtgaagaacagaaccagtcccccctcctcctctgcccctcca
gccctgggcctcaacccccccatgccccagctctccctcacagtggctgagctggaggcc
tctcagatggccgacagccaccctcttcctgctcctgctcctctcgctgttcctgtccct
gccaaggccagcaagatgccaagtgaagtagttcctgaaggatcaccagcagaggactcc
accacccagcagagccccagcacctcctccagtctgccttccccccctccctccgcctcc
tcctcctctgctgctacccacctccccctgccaccagggggtgacaccgaggatgacgat
ggcatgaagcacctgcaacaggaggcagagaagatggtggcatccctgcaggacacctct
ctagaggaggagtgttttacccagacgctgcaggagagcagaaacacagcctctgccctg
cccctctcccacgacgctgccatgaagtggttctacaaggacccccaggcagagatccag
ggtccgttcaccaccctggagatgtacgagtggttccaggcgggctacttctccatgtct
ctgctggtgaagaggggctgcgacgagggcttccagccgctgggtgacgtcatcaagatg
tgggggcgcgtgcctttcgcccccgggccctccccaccgcccctgctggtgagacctcca
ccaccgcgcccgcagccgctgccaccccggggtcctgctggtaacatggatcaggaccgt
ctgaagaagcagcagcaacaggacttggcagcagctgctctctatcagcagctccagcag
cagcagcagctattccagctcatcaacaggtgtggagaacagggtatgatgccttcagtg
aacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttca
cagcaatcaggcggtgaagccagtttatgggacttaacaatgaattcttcaactcagggt
ccaacactcgaacagcttcagaagctccagcaggagaggagggaggctgaactcaggacg
aagcgcgaagaggaggagcagcgcaagaggagagaggagaaaaggaggcagcaggaggag
cagaagaggagggaggaggaggagatcttcagacgcaaacagtgtcgccagcagcaggag
ctgatcatgaagctgctccagcaggcccctcagcagggctcaggctccggggtggggtct
ggctggggaactgggggcctcaacaagccaggggccaagggcctcagtctgctggacatg
caggaagccgagaggcttctcaaacagcagcagagagcccagcagcaacagagggaacgc
catcaaggcatgtccatgggtcagtggggggacggaggtgctgtcccagggggcctgtgg
ggaggcggaggggggatggagggtaaggctggaggcggaggggccatgggtctgtgggag
gaggcggtgaagaaccagtccagaggtggcagcatgcagggtctgaagaacagccgcagc
agcccctcactcagtgagcagtatatgttaagtcgtaggaagcagcgtacggatgaggag
gacaagctgctgaagctgctgcagggcatcaagacgcctcaggacgggttcaccacctgg
tgtgaacagatgctgcatgccctcaacacccaagccaacaacacctcttccccactggac
gtgtccaccatcgtggcgtacctgaaggaggtagagtctccctacgaggtgttggacttt
atctgctcctacctgggagacaccatggaagccaaagagttcgccaagcagttcctggag
cgccgtgccaaacagaaacagaaccagaagaggcagcaggagcagctatcaaaggaagta
gcagggctgaccatgaacaacttccctctgcaggactccatgcggggcgtgaaccccagc
gcactgcagtctatgttccaggcggcccacatggctaagggagggatgtacgatgcccag
gggggcatgaagaagaagaaacagcccgtgatgctgcagtctgaccccagcatcctaggt
aagacatgtcctcctcaactcattcacacttacgacttattgcacacttgttacaaacgt
atcacttcacaatgtatcacttcagtatga
DBGET
integrated database retrieval system
