Oncorhynchus mykiss (rainbow trout): 110500610
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Entry
110500610 CDS
T07259
Name
(RefSeq) protein transport protein Sec24D isoform X1
KO
K14007
protein transport protein SEC24
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110500610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110500610
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110500610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
110500610
NCBI-ProteinID:
XP_021433738
Ensembl:
ENSOMYG00000045731
UniProt:
A0A8C7UUA1
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Position
21:48382854..48414134
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AA seq
1086 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSSPAQPLYGHYGGQPQSFPAPPTGLMKPVSSPS
GMPPSEVSSQYGSNIQQNGAHPQRYPAPPAAAAASPYGQPPNSTYHTMAPQAPAQQLTNQ
MGSMNLGYGPGPMQNPQAPPTSPPAQQPFQTAPPPTMGQSTLGPPPAGPHSPQMAPPQSP
LAGPSMGGHPSMGGHPPMGGMGRPFPGPPPPGSGGFQQPGPGAAGQPGYPQQPQGQFGGQ
MAGPFQGGAAHMSGPPQKKLDPDSIPSTTQVTEDDQAKRGGQVYTTNLRGQVPPLVTTDF
TVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLGAIIKPFATVPKNETPLYVVNHGETG
PIRCNRCKAYMCPYMQFIDGGRRYQCGFCNCVNEVPTFYFQHLDHMGRRVDLYERPELSL
GSYEFEATLDYCKSRPAFSASIRGEPSQTVTAETKQRPVLCPSSTFLTNGGQSDVTVLTA
PRSKQANNKPASPPAYIFMIDVSYANIKSGLVRLVCEELKTLLDNLPREDGAESSTVKVG
FVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNFQESRAVINNLLDQIPDM
FADTNESETVFAPVIQAGVEALKTAECSGKLFIFHSSIPTAEAPGKLKNRDDKKLINTEK
EKTLFQPQKGVYEQLSKDCVSQGCSVDLFLFPSQYVDLATMGDVPTHTGGSIFKYSNFQV
EMDGEHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATNFFGAIHMNNTTDVEMAAVDCDKA
VTVEFKHDDKLSEETGALMQCALLYTTVSGQRRLRIHNLSLNCSAQLSELYKSCETDALI
NFFAKSAYRAMLNQPLKTVREILVNQTAHMLACYRKNCSSPSAASQLILPDAMKVFPVYL
NSLMKTGPLVGSAELSTDDRAHQRLIATAMGVEDTQLLLYPRLIPLHNMDVASDVVPAPV
RCSEERLTDAGMFLLENGRSLFLWLGQACPPELVQRVFNVPSFTHLPADLSSLPVLDNPQ
SKKLRSIIDSLLDQRPSAMKLLIVKQKDRSEMLFRQHLVEDKGPHGGASYMDFLCYVHCE
IRQVLT
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacgcctccatactcccaggcccagcctgggatgggg
ggctacccagctgggtttgggagttcgcctgcccagcccctctatggacattatggggga
caacctcagtcattcccagccccaccaacaggtttgatgaagcctgtgtcatccccctcc
ggcatgcctccgtcagaggtctccagccagtatggctcaaacattcagcagaatggagct
caccctcaaaggtaccctgcccctcctgctgctgctgccgcctctccgtatggacaaccc
cctaattccacctaccacaccatggccccccaggccccagcacagcagctcaccaatcag
atgggttccatgaacctcggatatggtccagggcccatgcagaaccctcaggcacccccc
acctctcccccagcccagcagccattccagactgcccctcccccaaccatgggacaatca
accctgggccccccacctgcaggcccccattcaccccagatggctcccccacagtcgccc
ctagctggcccatctatgggagggcacccatctatgggagggcacccacccatgggaggc
atgggtaggcccttcccaggcccaccccctccaggctctgggggcttccagcagcctggg
cctggagcagccggacaaccaggataccctcagcaaccacaaggtcagtttggggggcag
atggcgggacccttccaaggtggggcagcccatatgtccgggccacctcagaaaaagctg
gaccctgactccatccctagcacaacacaagtcactgaggacgaccaagccaaacgagga
ggacaggtgtacaccacaaacctcaggggtcaggttcccccgctagtcactactgacttt
actgtacaggaccaaggaaacgccagtccaaggttcatgcgttgcaccacctactctttc
ccctgcacggctgacctggccaagcagtgccaagttcctttgggtgccatcatcaaacct
ttcgccacggtgccaaagaatgagactcctctctacgtcgtgaaccatggtgagactggc
ccgatccgctgtaaccgctgcaaagcctacatgtgtccctacatgcagttcatcgatggc
ggccgccgctaccagtgcggcttctgcaactgcgtcaacgaagtgccaactttttatttc
caacacctggaccacatgggcagaagggtggatttatatgagaggccagagctgtcgctg
gggtcctatgagttcgaagccaccctggattactgcaagtcccggccagctttcagcgca
agcatccgaggtgagccgagtcagactgttaccgcggaaacaaaacaacggcctgtgctg
tgtccttcatccacattcctaacaaatggagggcagtcggatgtcacagtcttaacggct
ccaagatccaagcaagctaacaacaagccagccagtcctccggcgtacatcttcatgatc
gacgtgtcctatgccaacatcaagagcggactggtcagactggtatgtgaggagctgaag
accctgctagacaacctgcccagagaggatggtgccgagagctcgacggtgaaggtgggc
ttcgtcacttacaacaagatcctacacttctacaacgtgaagagtgccctggcccagcct
cagatgatggtggtgtccgacacggccgagatgtttgtcccactgctcgacggcttcctc
gtcaacttccaggagtctcgcgccgtcatcaacaatcttctggaccagatccctgatatg
tttgcagacaccaacgagagcgagacggtctttgcccccgtcatccaggctggggtagag
gcactcaagacagcagaatgcagtggcaagctgttcatcttccactcatccatccccacc
gccgaggcccctgggaaactgaagaacagggacgacaagaagctgatcaacacagagaaa
gagaagactctgttccagccccagaagggtgtgtacgagcagctctccaaggactgtgtg
tctcagggttgcagcgtggatctcttcctcttccccagccagtatgtggacctcgccacc
atgggagatgtccccacacacacaggaggctccattttcaagtacagcaacttccaggtg
gaaatggatggagagcatttcctgagtgacctgaggaaggatgtggagaaggccatcggg
tttgacgccatcatgagagtccgcaccagcacaggcttcagggctacaaacttcttcggt
gctatccacatgaacaacaccacagatgtggagatggctgccgtggactgtgacaaggct
gtgactgtggagttcaaacacgatgacaaacttagcgaggagacgggcgcactcatgcag
tgtgccttgctgtacacgaccgtcagcggccagcgtcgtttgcggatccacaacctcagt
ctgaactgcagcgcccagctgtctgagctatacaagagctgtgagactgacgccctcatc
aacttctttgccaagtcagcgtaccgtgccatgctgaaccagcccctgaagacggtgagg
gagattctggtcaaccagacggcccacatgctagcctgctacaggaaaaactgttccagt
ccctccgctgccagccagctgattctgcctgatgccatgaaggtgttcccagtctactta
aacagcctgatgaagactggtcccttggtgggcagcgctgagctctctacagacgacagg
gctcaccagagactcatcgccacggccatgggggtggaggatacccagctgctgctctac
ccacgccttatcccactgcacaatatggatgttgccagtgatgtggtgccagctccagtg
cgctgttctgaggagcgcctgacagatgctggcatgttcctgctggagaatgggcgctcc
ctcttcctgtggctgggccaggcctgccccccagagctggtccagagagtcttcaatgtg
ccctccttcacccacctgcccgctgacctgagctccctgccagttctggataacccacag
tctaagaagctgcgttccatcattgactcattgcttgaccagaggcccagcgccatgaag
cttctgatcgtgaagcagaaagaccggtctgagatgctgttccgccagcacctggtggag
gacaaggggccccatggtggagcctcctacatggacttcctgtgctacgtccactgcgag
atcagacaagtcctcacttaa
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