Oncorhynchus mykiss (rainbow trout): 110500614
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Entry
110500614 CDS
T07259
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371
Apelin signaling pathway
omy04910
Insulin signaling pathway
omy04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110500614
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110500614
04920 Adipocytokine signaling pathway
110500614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
omy03029
]
110500614
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
110500614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
110500614
NCBI-ProteinID:
XP_036813967
Ensembl:
ENSOMYG00000045926
LinkDB
All DBs
Position
21:complement(48915884..48975325)
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AA seq
1290 aa
AA seq
DB search
MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISSQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
QSCPSTPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYIGDKAQNHAASNHRIRPPPAV
VKTEISWNSKPRGGCPQQSRLVRRPCTELLKYLTATDDILLQTKASEAKSAWGGGGKDKG
GLLGASSSSSSPSSTTSFSSLSSSSSIASKKKSSSSSVVSQQQQQQPHHQRGESRAAGEC
SVAGVGAGKWRRCAHGAGGTEGQSEPAAAPAPVPQARRNDSAHARPKLERRPSSEEGRPP
GLQPAVDAGRLAAARFIRYMHSYSLPPRETGQTGSCGRCHKAGAATQAIECWGRHDRGGA
APRHIAVTVKKREEEPGHPLLSQLLTSKQRPARYQAHLLPPTTTPQPCKSRSSRMSSGVL
ERDQCPSQAIEVEEKEHRGTVNIDPCRWGLRQAKEPDSDPLLAESLGLGSWVSQPDQGLD
LGLGLGWLEVGLVEQADCFGEDVRDDDAIGSPMALSWGLPSPFFPDSRNPDPTPSVTQQH
LHMQAVCRHPEDQSLLLLAKPTTLPLPLTPESPNDHKGSPFENKTIERTLSVEISGTPGL
TPPTTPPHKVSQENPFKASIKTKLSSCSPSALACKRARLSEAKPCRPLAPTSAPGRKGPE
QTELYAQLSKASTALPTSVVAATTGGCKEERCCGNNKRSVQPRCYGDHDYCQSTATSTKQ
DPAAGANTNAANATVTMTITTTTPLKPNPGVAEDRHVECKDSAMPPSSSSSSSTSPPPSS
SSLAKQLQQQQSSSPVGKEARGQDRTPIIQDKPHPPQTPEGDQHSASRKQPLRDQDIRAE
LNKHFGRPQQAIYSQGEKGEEVVVEEGRRGGGEMAGALQTSKESPAGYENYPKLPSSGSG
STGYLHPGLSPFHEELEGQGVEGHFLYPWEGIPLDLLFESCSPSCSLSSCSPSRGSVSPP
SSLLLSPRHFHWPHSGSPSSRSHSRSRSRSSSSHHRRRSLSSSPDGRPSSRSRHNMDSST
LRSRTHKSPHSQSRSPLSRRPRYDSYEEYQHECLKREEYRQDYQKREFERAEQRERQREK
AIQEERRVVYVGRLRSDSTRTELKRRFEVFGEIEECAVNLRDDGDNFGFITYRYTCDAVA
ALENGHTLRRTNEPQFELCFGGQKQFCKSNYTDLDSHSDDFDPASTKSKYDSMDFDSLLK
EAQCSLRRNNQHFLNNLLEQWDEICCSLSK
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaagactcggtctggagagaattagagtgtgctgctttg
gttggcgaagaccaacccctctgcccggacctccccgaacttgacctctcagagcttgat
gtcagcgacctggatgcagatagcttcctgggcgggctcaagtggtacagtgaccaatca
gagataatttccagtcaatatggcaacgaggcttctaacttgtttgagaagatagatgag
gaaaatgaggccaacttgctggcagtgcttacagaaaccctggacagcatcccagtggac
gaggacggattgccttcgttcgaggccctggcagatggggacgtgaccaatgccagtgac
cagagctgtccctccacccctgacggctcgccgcgcacccccgaaccagaggaaccctcc
ctgctgaagaagctccttctggcgcccgcgaactcccagctcagctataatcaatacata
ggtgacaaggcacaaaaccatgcagccagcaaccaccggatcagaccaccacctgctgtt
gtcaagacggagatctcctggaacagcaagccgagggggggctgtccgcagcagagccgt
ctagtgaggcgcccgtgcaccgagctgctcaagtacttgaccgccaccgacgacatcctc
ctccagaccaaagccagcgaagccaagagcgcctgggggggcggcggcaaagacaagggc
ggcctgctgggcgcctcgtcctcctcctcctcaccgtcctccaccacttccttctcctcc
ctctcctcctcctcctcgatcgcctccaagaagaagtcgtcctcgtcgtctgtcgtgtca
cagcagcagcagcagcagccacatcaccagcgaggtgagagccgggctgctggcgagtgt
agtgtggctggtgtgggggctgggaagtggcgtcgctgcgctcatggggctggtggcact
gagggacagtccgaacccgcggcggcacccgctcctgtcccccaggcacgtaggaacgac
agcgcccatgcccgccccaaactggagcgcaggccgtccagtgaagaaggaaggccgcca
ggtctgcagcctgcggtggacgcggggcgcctggcagccgctaggttcattaggtacatg
cattcttattctctccctcctagagagacgggtcagacaggcagctgtgggcgttgccat
aaggcgggcgctgccactcaggcaattgagtgctggggcaggcatgaccgtggtggggcc
gcgcctaggcacattgcagtgaccgttaagaaaagagaggaggagccagggcatccgttg
cttagccagctgctgacctccaagcagaggcccgcccgctatcaggcccacttgcttccg
cccactactacccctcagccttgcaagagccgttcttcaagaatgagctctggagtcctg
gagagggatcagtgtcccagccaggctattgaggtggaggagaaggagcacagagggact
gtcaatatcgatccctgcagatggggtctcagacaggccaaggagcctgattcggacccc
ctgttggccgagagcttaggcctaggcagctgggttagccagccagaccaggggctagat
ttggggctggggctgggctggctagaggttggcctagtggagcaggctgactgtttcggg
gaggatgttcgcgatgatgatgccataggcagccccatggcgctctcatggggcctgcca
agcccattcttcccagattctagaaatccagaccccactccctccgtcacacagcagcac
ctacacatgcaggcagtctgcaggcaccccgaggaccagagcctcctgttgttagccaaa
ccaaccaccttgccacttcctttgaccccagagtctccaaatgaccacaagggatccccg
tttgagaacaaaaccattgaacgcacattgagtgtggagatctctggaaccccaggtttg
acaccacctaccacgcccccccacaaagtcagtcaagagaaccctttcaaagcatcgatc
aaaaccaagttgtcttcatgctccccatctgccctggcgtgcaagagggctcggctgagc
gaggcgaaaccctgcaggcccctagccccaacctcggccccaggcaggaagggcccagag
cagactgagctgtacgcccagctaagcaaagcgtccactgccctccccacctctgtggtt
gctgcgacgacagggggctgcaaggaggagcgctgctgcggcaacaacaagcggagtgtc
cagcctcgctgctacggtgaccacgactattgtcagtccacggcgaccagcacaaaacag
gaccctgccgccggcgctaacactaatgcggctaacgctaccgttaccatgacgattact
acgacaacccctctgaagcccaatccgggtgtggcggaggacaggcatgtggaatgtaag
gactcagccatgccaccctcctcctcctcttcatcctctacatctcctcctccatcttca
tcctctttggccaagcagttgcagcagcagcagagctcttcccctgtgggtaaggaggct
cgggggcaggaccggacccccatcatccaggacaaaccacacccaccacagaccccagaa
ggggaccagcactctgccagcaggaagcagcccctgcgagaccaggatatccgggcggag
ctcaacaagcactttggccgcccccagcaagccatctatagccagggtgagaagggggag
gaggtggtggtggaggaggggagacggggaggaggggagatggccggagccctgcagacc
tccaaagagagccctgctgggtacgagaactaccccaagctccctagttctgggtctggt
tctactgggtacctgcacccaggcctctctcccttccacgaggagctggagggtcaaggc
gtcgaggggcacttcctctacccctgggagggcatccctttggacctgcttttcgagtcc
tgctcgccgtcctgctcgctgtccagctgctccccctcacggggctccgtctcgcccccc
tcctccctcctcctctcccccagacacttccactggccccactcgggctccccctcctcc
cgctctcactcccgatcccgatcccgcagttcttcctcccaccaccggaggcgctccctc
tccagctcgcctgacggacgcccctcctccaggtctcgccacaacatggactccagcact
ttgcggtccaggacccacaaaagccctcactcacagtccagatcccccctcagtcgcagg
ccacggtacgacagctacgaggaataccagcacgagtgtctgaagcgggaggagtatcgc
caggactaccagaagagggagtttgagagggctgagcagagggagaggcaaagggaaaaa
gcaatacaggaggagagacgggtggtgtacgtggggagactgaggtccgacagcacgcgg
accgagctgaagcggcgctttgaagtcttcggcgagatcgaagagtgtgccgtgaacctg
agagatgacggggacaattttggcttcatcacctaccgctacacttgtgacgccgtcgct
gcccttgaaaacggacacaccttgcgccggacaaacgagccccagttcgagctgtgcttc
ggtggacaaaagcagttctgcaaatcgaattatacagacttggactcccattctgacgac
tttgatccagcctccactaaaagcaagtacgactccatggatttcgacagcttgctgaaa
gaggcccagtgcagcctgagaagaaacaatcaacattttcttaacaatcttctcgaacag
tgggatgagatatgctgctcattgtccaagtga
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integrated database retrieval system
