Oncorhynchus mykiss (rainbow trout): 110500643
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Entry
110500643 CDS
T07259
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110500643
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110500643
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR
CA109-like
PPR_long
Motif
Other DBs
NCBI-GeneID:
110500643
NCBI-ProteinID:
XP_021433800
Ensembl:
ENSOMYG00000029468
LinkDB
All DBs
Position
21:complement(50413056..50472176)
Genome browser
AA seq
1945 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSAQQANLNHGSLKSPEIFLCYKRGHDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSVSNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WTPNTRYPLPVFSTFVLTNSSGEKVYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPMPLSGADYSTLLINLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHSNWKNLPKKPCKSLFNSLTNLQHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMAHILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLKSRERAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQRSEHTVFVMPPEPPTTEDESDPPTRYSYKSFPRLSMDLFD
CPKEVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSDPPLWAKCLFSHCYS
LWFICLPVGVRLVQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGLYGLPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVVRTVAQFKQALHR
MPATKGPTIITTVVSVSGDLLSHGSADHSSEVNGEDHTLFARSLIIGDATDNHCSTGGQS
DQGYGSKDELHQVQVDLAPSAAPLVNVDHRSKPKAQHNDGDIAGSVDSSVVVAEPTSPVE
AIPHVPSIVKLSTGGSFDTAMKRGETAPGKLFSLRSQSENVSLPEEGESTAPGGSGEAGP
AVQGQGQRQKAFSERSCSFSVESRAGMLMEKNGVDHIARRMGADARILADALSGCGTTQP
PTNPPSKALFKELESEEGRCPMLGKLSEEEGPVMDPTPLEEGLGKEEERMDGEDEMGLKL
EEEGDSGGRGDSSLPTLEMKEVDVGADPLSLLVSEHEELASVTSQELPHSLPAVVSRNLA
DEIEMYMSLRSPLGPKSSSMEFHQGGQGGDSSPDTAPVKQALERRSSLPVPPVKHPGGSS
GDSTPKRSPAAVTRSKTFAVIATRSRGVVASPRSSLTALVRSSQNGSLGSVINSISGMKM
DTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYSDDEDELAPGYRDRDSFPAGLDES
MLSGGGGGDSPTHRGPTQGLVSNGLTQSSTSLASSSSSSDTGRGPHSTLTPGRPGRGPDS
DQGSHHTSSSSIYQNCALEVLMSSCSLCRSCECLVYDEEIMAGWTADDSNLNTTCPFCRA
AFLPLLHVEFHDLRTNTAFYLKPSASGDSIHSASHQPTTTDSTVLVVGGAADTPRPDLIS
FPESSSEDPGEAPASQTATHKSLVPVPEPAQSDPLGLLEHQAGKRGTSLTRSNSVGGPLQ
SLVSYQRQPGHGVSTTSLPCSLTEVDGLGQKRPNPMPVSVPYLSPLVLRKELETLLENEG
DQVIYTHKFLSQHPIIFWNLVFYFCRLDLPSYLPGLILTSEHCNNGVQLPQTSLSQDSKQ
VYVQLLWDNINLHQEPGDPLYQSWRTLLEQKATLAPTDHQETRTFLNSIVRSIQTNDVYG
PINLLLREVKRHPEVKRQRGIYREILFLALVALGRENIDVEAFDREYRQAFDDLSTEQLK
ALHKIDRPPNSNVQWCLKCFGAPVI
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgaccgac
aagtccacgccactggagcaggacctgtcggagaccaagtccagcgggcccaaggcgccc
atcactgacctggctgtcatcaacaagtcagcgggcgagacggtgccggagggcttcacc
tgcatcgagagcacctacagcgcgcagcaggccaacctcaaccatggcagccttaagagc
cccgagatatttctctgctacaagaggggccacgacaagcccccgctcattgacatcggg
gtgttatatgaaggtaaggagcgtctcatccagggctgtgaggtaatccaggccactccg
tatggccgctgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttacgccgtgcgccacccgtccagccccagaactccctgtccgtcaccgacatctgcgtc
atcgtcaccagcaagggcgagacgccgccacacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctctagtgttttcctgtgctacaagaaatccgtgtcggtgtcc
aactccattaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtcggagtctgtgcccctgttctgcctccccatgggggctaagatcgaatgc
tggacccccaacacacgctaccctctccccgtcttctccacctttgtgttaaccaactcc
tctggggaaaaggtgtacggtgctgccatccagttctatgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagttgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacagtcaacaccaacaagtgcatctgcctcctttcccgctggcccttcttc
gagtcgttccgcaaattcctcatgttcctctacaagctgtccgtctcgggcccccacccg
ctgcccatcgaaaagcacatctcccatttcatgcacaacgtgtccttcccctcacctcag
aggcccagaatcttggtccagctctctgcacacgacaccttgatgctcgcacagcctgtg
tgtactcctatgcctctcagtggtgcagactacagtacactgctgattaacctgggctca
gagaactgtgccacgctgttgcactttgtcctgctggagagtaagatcctgctgcactcc
ttgagacccgctgtactcaccggggtggcagaggctgtggtggcgatgatttttccattc
cagtggcagtgcccgtacatccccctctgcccgctctctctggcgggggtcctcaacgca
ccctgtcccttcattgtgggcgtggactcccgctactttgacctctatgaccctcctccg
gacgtggtctgtgtggacctggacaccaacacgatctacctgtctgatgagaagaaacac
agcaactggaagaacctcccaaagaagccctgcaagagtctgtttaactccctgaccaac
ctgcaacaccagctgggcatcgtgcgtcggacggcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacgtccctggagatggagatc
caagaggccctgctgcgcttcatggcccacatcctgaagggctaccgttcctatctcaaa
cccatcacccaggccccctccgagaaggccacctctgcagactcactatatgacctacag
ggtttcctaaagagcagggagcgagcccaccagaagttctattcgcagctgaccaagact
cagatctttatacgcttcatcgaggagtgcacattcgtcagcgacaaggatacaggcctt
gccttcttcgacgactgcattgagaagctatttccctctgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcggaggacactaagctcatggaactagacgaatcacag
aggagtgagcatacagtcttcgtcatgcccccagaacctcccaccaccgaggacgaatct
gatccccctacccgctacagttataagagtttccctcggttgagtatggacctgtttgac
tgtcccaaagaggtgataccagcgctgaggagcagtacaccaggggccagcctgtccagc
agccctgcactgctggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccgaccctccgctgtgggccaagtgtctgttcagccactgctacagt
ctgtggttcatctgtctgccggtgggggtgaggctggtccagtcaaagagctgggccatg
cagcaggcctacaacgtcctgctcaagatgaggacgtctgaggtggaggtcctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtttgtacggtctgccggtcatggccgtc
cgtgttctggtggagatgaagaaggcaggggtgcaccctaacgcgatcacctatggctac
tacaacaaggctgttctggaaggcccctggccaagtcggaaccgcagcggtctcttcatg
tgggccaaggttcgcaacgtggtgcgtactgtggcccaatttaaacaggcactccaccgg
atgcccgccacgaaaggacccaccatcatcacgacagtggtgtcggtgagcggcgacctg
ctgagccacgggagtgcagaccactccagtgaggtgaacggagaggatcacacgctgttc
gcacgcagcctcatcataggagacgccacggacaaccactgcagcacaggaggtcagtct
gaccagggctacggctctaaagatgagctgcatcaggtgcaagtggatttggctccatca
gcagcccctcttgtcaatgtggatcaccgcagcaagcccaaagcacagcacaatgatggg
gacatagctggctcggtggacagttctgtggtcgtagcggagcccaccagccctgttgaa
gccatcccacatgtccccagcatcgtcaagctgtccacaggagggagcttcgatactgcc
atgaagagaggagaaactgccccagggaagctgttctctctgcgcagccagagcgagaat
gtctctctgccggaggagggtgagtctacagccccgggtggctctggggaggcggggcct
gcagttcaggggcagggccagcgccagaaggccttctcggaacgcagctgcagcttcagc
gtcgagagtcgtgccggcatgctgatggagaaaaatggtgtggaccacatcgcgagacgc
atgggtgccgatgcccgaatcctcgccgatgccctttctgggtgtggcaccacccaacca
cctacaaatccaccatccaaggccctttttaaggagttggagtcagaggaggggcgttgt
ccgatgctggggaaactgtcagaggaggagggtcctgtaatggacccaaccccattggag
gaggggctagggaaagaggaggagagaatggacggggaggatgagatgggactgaagttg
gaagaggaaggagattcaggggggaggggtgatagctctctcccaaccctggagatgaag
gaggtggatgtgggggctgatcccctctccctgctggtctcagagcacgaagagttggcc
tccgtaaccagccaggagctgccgcactccctgcccgccgtggtgtcccgaaacctggca
gacgagattgagatgtacatgagcctgcgaagcccactgggccccaagtcctccagtatg
gagttccaccaggggggccagggaggggactcttccccggacactgccccagttaagcaa
gctctagaacggaggtccagcctccctgtgccccctgtcaaacacccagggggttcaagc
ggggactcgacgcccaaacgcagccctgctgctgtcacgcgctccaagacatttgccgta
atagccaccaggagccgcggtgttgtggccagcccgagatcgtcactgaccgcgctggtg
aggtcatcgcaaaatggctcgctgggctcggtcatcaactccatctcaggcatgaagatg
gacaccctgctctctggtcccaagatggacgtgttgaagtcaggcatgaagcaggcaggg
aacctggccagcaaagtgtggggggctgtggcctcagcctattcctactccgatgacgag
gatgagctggccccgggctatagggatagggatagtttccctgccgggctggatgagtcc
atgctgtcagggggtggaggaggggacagtcccacccacagagggccaacccaaggcctg
gtgtccaacggactgacacagagcagcaccagcctggccagcagcagtagcagcagtgac
acagggagaggacctcactccacactgactccaggacggccaggaagaggtccagactct
gatcaaggctcccaccacaccagctcctcaagtatctaccagaactgtgccctagaggtg
ctgatgtccagctgctccctgtgtcggtcctgtgagtgtctggtgtacgacgaggagatc
atggcgggctggacggcagacgactccaacctcaacaccacctgtcctttctgccgcgcc
gcctttctgcccctgctccacgtcgagttccacgacctgcgcaccaacacagcgttctac
ctgaagcccagtgcatcaggagacagtatccacagcgccagccaccagcccacaactaca
gactccactgtgctcgtggtggggggtgcagcagacaccccgcgcccggacctcatcagc
ttcccagaatcctcctctgaggacccaggggaggccccggccagccaaacagccactcac
aagagtttggtaccggtaccggagccggctcagtcggaccctctgggcttgctggaacac
caggcagggaagcgtgggacttctctgacgcgcagtaacagcgtgggcgggccactacag
agcctggtctcttaccagagacaacccggacacggcgtgtccaccaccagcctgccctgc
agcctgacagaggtggatggcctgggacaaaagcggcccaaccccatgccagtgtctgtg
ccctacctcagccccctggtcctccgcaaagaactggagaccctactagagaacgagggg
gaccaggtgatctacacccataaattcctgagtcaacaccccatcatcttctggaacctg
gtgttttatttctgtcgcctggacctgcccagctacctgcctggcctcatcctcacctca
gaacactgcaacaatggagtacagctcccccagacctccctgtcccaggacagtaaacag
gtgtatgtgcagctgctgtgggacaacatcaacctgcaccaggagcctggcgatcccctc
taccagagctggaggaccctgctggagcagaaggccaccctggcccccacggaccatcag
gagacacggaccttcctcaacagcatcgtccgcagcatccagacgaacgacgtatacggc
cccatcaatctgctcctccgagaggtcaagcggcacccggaggtcaaacgccaaaggggt
atctatagggagatcctcttcctggcgcttgtggcattgggacgggagaacattgacgtc
gaggcctttgaccgtgaataccgccaggcctttgatgatctgagcacagagcagctcaag
gctctgcacaagattgaccggccacccaacagcaatgtccagtggtgcctcaagtgcttt
ggcgctccagtcatctga
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