Oncorhynchus mykiss (rainbow trout): 110500801
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Entry
110500801 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110500801
03036 Chromosome and associated proteins [BR:
omy03036
]
110500801
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110500801
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110500801
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110500801
UBL E3 ligases
110500801
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
110500801
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110500801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
GRP
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
110500801
NCBI-ProteinID:
XP_036814336
LinkDB
All DBs
Position
21:64734656..64754522
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AA seq
857 aa
AA seq
DB search
MAPTKMKLRVRRRESGGGGQEQEETSKTSSQSVSAEASPDSKCPICLDRFNNMSYLDRCL
HRFCFRCIQEWSNNKVECPLCKQPFSSILHSIKAQDNFKEFTLRPPPVPGENGTAMIAAA
EAAAAALVTARVGGSHGERRRTRRRGGGGGGGQGRGGRERRQSGRLWRGRRLSSAPPLPP
LHPPLLPRPEDGGMRGEMDGEDPGVIFDGLTGVSAPPPHDRGVQRLMVRLAARRRSQREG
RSVRLLRPREMLSFRRALYRSGVRVRNARGGCERPRDITAAFYQRNPVALHRLLPWLQRE
LTVLYGAHGSLVNIVQRIITSRIARHDMEGGGGAIQDELRPFLLARTDHFLHELISFARS
PLSMEVYDQLSIYDPPAPSYEDRMTSSSSDTDDSVIAISDEEEEEGGSEGERERRPVSVA
GSSALSQSAWDDETPGPSYSTAEPSQSPMPLSISPGGRDSGPAGANQNPAQDMTAAGNGE
RVEEGGEEEEGEQCMIVGFVKAMAERTPELVQLSSDPSDEEGEKQETKETVPQTALTPFS
LVVPPLSIPVPPMSLFKNTSTERQGGGGERQGGGGERQGGGGQRGLGVRHLDREREQVEE
RLLYSPLGERREGRHRERSCSGSRSRSRHRSASVWSRSGRSRSSERSWSARSPVSVRSDD
SSQERRRKRRAREREKRRREKGRGSHDRGSHDRGSHDRGSHDRGSHDRGSHDRGSHDRGS
HRQHSREHRRETSGGSERSRGRERERIPYEPARSQYSNTGIFFSPENSVLSHSPSLSRSS
QRGPESPGEHRHSRSSDSLSSSSSLSHLSVHRQHSRHSPRSDKPGGKRKYKSRHLEDPSW
EPSSSARRERGRGGEGE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcccctaccaagatgaaactgcgtgttcggcggcgggagagcggaggaggtggtcag
gaacaggaagaaacctctaagacctcctctcagtcggtgtcggccgaggcgtctcctgac
tctaaatgcccaatctgtctggaccgtttcaacaacatgtcttacctggacaggtgcctc
catcgcttctgcttccggtgcatacaggagtggagcaacaacaaggtggaatgtcctctg
tgtaaacagccgttctcctccatccttcactcgatcaaggcccaggacaactttaaagag
tttactctcaggcctcctcctgttccaggggagaacgggaccgcaatgatcgcagctgcc
gaagcagccgccgctgccttggtgaccgccagggtaggtggtagtcatggagaacgaagg
aggacgaggagaagaggaggaggaggaggaggggggcaggggagaggagggagagagagg
agacagtcaggacgactgtggagagggaggcgactctcttctgctcctcctctccctcct
cttcatccccctcttctacccaggcccgaggatggaggaatgagaggagagatggatgga
gaggacccgggggtcatctttgatgggctgactggcgtgtccgcccccccacctcacgat
cgaggagtgcagcgtctcatggtgcgtctggctgctaggcgacggtcccagagagagggg
cgctccgtaagactgctccgaccacgggagatgctttccttccgccgggcgctctaccgc
agtggcgtacgtgtcaggaacgcccgcgggggctgcgagaggccccgtgacatcactgct
gcgttttaccagcggaacccggttgctctccatagactcctcccctggttacagcgggag
ctgacggtgctgtacggcgcccatggctcattggtcaacatcgtccagcgcatcatcacc
tcgcgaatcgcacgtcacgacatggagggagggggtggggccatccaggacgaactccgt
cccttcctgctggcgaggactgatcacttccttcacgagcttatcagttttgcacgttcc
cctctcagtatggaagtgtatgaccagttgtccatctacgaccctccagcgccgtcctac
gaggacaggatgacatcatcatctagcgacactgacgactctgtcatcgccatttcggat
gaagaggaagaggaaggagggtcggagggagaacgagagagacggccggtgtcggtagca
ggaagtagcgctctgagccaatctgcttgggacgatgaaacaccaggaccctcctactct
acagctgagccgtcccaatccccgatgccgctgtcgatcagcccaggggggagggactct
ggtccagcgggggctaatcagaatcctgctcaggacatgacagcggcaggaaatggagag
agggttgaggagggaggagaggaagaggagggggaacaatgtatgatagtagggtttgtt
aaagccatggctgagagaactcctgaactggtccaactctcctctgacccctcagacgaa
gagggggagaaacaggagacgaaagagactgttccacaaacagcgttaacccctttctct
ctcgttgtccctcccctctccattccagttccccccatgtctctgtttaaaaacaccagc
acagaaagacagggaggagggggggagagacagggaggagggggggagagacagggagga
ggggggcaaagaggactgggagtaagacatctagacagagagagagagcaggtagaagag
agactgctctattcccctctaggggagagaagggagggcagacaccgagagcggtcgtgt
tcaggatcgcggtccagaagcagacatcggtcagcgagcgtttggtcgcggtccggtcgg
tccaggagttctgaacggagctggtcagcacggagccccgtgtccgtacggagcgacgac
agcagccaggaacggcgccggaagagacgggcgagagagcgggagaaaaggagacgggag
aaaggaagaggctcccacgacagaggctcccacgacagaggctcccacgacagaggctcc
cacgacagaggctcccacgacagaggctcccacgacagaggctcccacgacagaggctcc
cacagacaacacagcagagagcacaggagagagaccagtggaggaagtgagaggagcaga
ggtagagagagagaaaggattccatatgaaccagccaggtcccaatattctaacacggga
atattctttagtccggaaaacagcgtcctatcccattccccgtccttatcccggagtagc
cagcgaggaccagaatctcctggggaacaccggcattcccggtcctctgacagcctctct
tcctccagctccctgtcccatctctctgtacacagacagcattcccgacattccccacgc
tccgacaagccgggtgggaagaggaaatataagtcacggcatctggaagacccttcctgg
gagccatccagctctgcacggagagagagggggcgagggggggagggagag
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