Oncorhynchus mykiss (rainbow trout): 110500834
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Entry
110500834 CDS
T07259
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110500834 (arhgef40)
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110500834 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
DHC_N2
CLIP1
IQ_SEC7_PH
WIT1_2_N
Motif
Other DBs
NCBI-GeneID:
110500834
NCBI-ProteinID:
XP_036813718
LinkDB
All DBs
Position
21:complement(40548191..40587814)
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AA seq
1803 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFIPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTTEWLHSVNKERGYKREGGGGLDTCLVSTCDGVVR
LPWEEVVYPKFIHNPSDDLTTMADHPTSVSDHTTDLTPVVGLGLGGWGGSSSGEPDSCSW
DEEDDDLPPDSVDAEAVLPRRRCSEDGLGRTTRHHQMAGDGDYVELLEPRGGPDGGADPR
QRYLEMHGICKTKTLPLCRRSKAIKLRRGKAWGYGRLDAAGGSRGVLGGKRDSVTHRGDW
LPPRPLPRVIDVGRARRSESYPSSLQNSDEGEKQALGNDPEGLGSQGLYFDGPSKERRPG
VGRETEGSGCNVTQPCRDSHGSNSLVASKTTNPKAVHVVESQSDQSSRSESVFEEADKSL
SGDSDTMPTTDTRGSGENAARPLIDIPGNGENVDSPLADGSETQKGRHSTSDSCVPDKTA
DSTEHRGTERSLSRPGTDADPKGATTPEERAEGKTEEIGGCPRGKEVKTRGFRAPRRKRK
GRGGKGKAKSGGRGNQKTRDQAGSKPPSKTPQRGPAISPTTNLPITTTNLSEATQQPEGA
DKEVTPVNEGQEKAEIGESNTENQVVQSEVSPDTTTSQSGTSLSNHSTEELGAETSPDLS
NGLSPKAPPLLRELDTELLQSGKLMLTGTVDRLGRAVVVTETHLPEDGCRADEMGRVLAC
YHRITRSSAKERGLTVIVDSRQSPPSALCLAALKQLQAVVPGGLGSVLILVEEQQQESST
HSLEGVEVHTVRGTGVLQQYIDRQQLPLEMDGDYKHCHSDWLAFRLSVESLTECCESALS
LLEDALQSMGTAPLPDCIKTVPLSVEKHRQLMTSILVDQRLTELQRKGGAWLAGLANGTS
GLAKRSPDCRAALAATSNLYDSVDDSLHRLVQVSNQRGSDLEALGRLAAMVDKLEKCERE
IEQIQDQLEDYREPPISLSRLSLKQQKFKTFRESANELHTETLAILGDLESWSELDWGGL
IEVQVRVPPVRERLRDMSHCLSDCWTTLDNTQRLLSTLTEANQWCDVISSTSPSPSTPLS
SLPPIPPSRFQDARALALELGGGALLDLWSQTLERYQRTVAQVKPRLLQQAERGQNQGQA
RPKTPSASSLWDLMGPEGEGDWGVGAGGGEGGLQSWGSLASLFRPQTCSTLKIGEEKGNK
KEGMGGGGGGAGGGKFLQNLLHPAKKSPTEAPLPPKPPRKRHPSFDLQALLAPRRGPATA
RPVEPPVGAASRNSPLTWLGRRALTDPVITAGMAAAVPGWREGGGGGGGIGGGIGGVQGG
SGVLIRGVEVSSKEVVDYTGTPRQHVLLSRAERETGGERQGTTTAQSKLYLLWCRMLSSE
RQYVAVLKGVEETYLPLLEGPDTPSSLRGKADLLFPKWASLSSFHSQNLLPAMEGALLQS
LLQQDLFSKYREEFLQYSHYIRIKPELDSPLVTQAADFFKLRLPATPPLSPLSFPHCLQA
PTLRLEQYCDALEELGGLNPASDSSLSVLRHVQRHGEDLRASDLIVGCPVPVAERGELVR
QGELLVCGGTRRKKTGVRSVFLYQHLIIFTKQKSPGPGRTAYSFKHSIKTGEMGLTQSVG
EEGVRFEVWVRQAPRIRDCLTLQCQSGEGRAAWTHDIAQLLWTHAIHNTELCLKETMCIG
VSSKILLDATGAPVTSELDSIYNLNDRVHSSCSDSSSVGSQKEGGSPASGRGQTQNQSPS
TAV
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagaggcagtggaagattgtgtgcagggggctctctcgtccctctaccccccc
ttcgagagcacagccccacctctcctctctcaggttttctctgtgttagagtcgacttat
cagcatgacagtctgaggtacctgctggattacttcatcccagcaaaacaccttcttcac
aaattacagcagcatgcctgttctcagtatctgggttgtctgttcctccactccggttgg
cccctctgcctcggggagaaggttgtggtccagctctctactctggactggaggctgctg
cgcagtaccgacttctacttgcaggtggttcccttctccacacgctgcccccgcctggcc
ctcaagtgtttggcccccgggggccgcaacgtccaggaggtcctggtgcccgagtcacag
caccccctggtgttcactacagagtggctgcacagtgtcaacaaggagaggggctacaaa
agagaaggaggtggagggttagatacgtgtctggtcagtacgtgtgacggggtggtccgc
ctaccgtgggaggaggtggtctaccccaagttcatccataacccatcggacgacctgact
accatggctgaccacccaacctctgtctccgaccacaccaccgacctcaccccggtggtg
ggcctcggcctgggtggctgggggggctcctcctctggagaaccagactcctgttcctgg
gacgaagaagacgatgacctacctccagacagtgtagatgcagaggccgttctaccccgc
cgacggtgcagcgaggacgggttagggaggacgacgaggcatcaccaaatggctggtgat
ggggactacgtggagctcctggagcccagggggggtccggacggcggcgcagaccccagg
cagaggtacctggagatgcatgggatctgtaagaccaagaccctgccgctgtgtaggagg
agcaaggctatcaagctccgcagagggaaggcctgggggtacgggcgactggacgcagcc
gggggcagtaggggcgtcctggggggtaagagggactctgtgacccaccggggggactgg
ttacccccccgccccctgcctagagttatcgatgtaggccgagcgagacggtctgagtca
tacccctcctcgcttcagaactctgacgaaggggagaaacaggccctcggaaacgaccca
gaaggcctaggaagccaggggctgtattttgatggtccgtccaaggagaggaggcccggg
gtgggcagggagacggagggcagtgggtgtaacgttacacaaccatgcagggacagccat
ggaagtaacagtttggtagcgagcaagacaacaaatcccaaagcagtgcacgttgtagag
agccaatcggatcaaagctctcgctctgaatctgtgtttgaggaagctgataagtcactg
agtggagacagcgacaccatgcccactacagacacacgaggaagtggggagaatgcggcg
aggccattgattgatattccaggaaatggggagaatgtggacagcccgttagcagatgga
tctgaaacccagaaaggaagacattccactagtgactcttgtgtaccagacaaaacagca
gactcgacagaacacagagggacggaacgttctctctctcgacccggtactgacgctgac
ccaaagggagcaacaactccagaagagagggccgaaggaaagacggaggagataggaggg
tgtcctagaggaaaggaagtaaaaacgagaggattcagggcacccaggaggaagaggaaa
gggagagggggaaaggggaaggctaaaagtggtggtcgtggcaaccagaagactcgagac
caggccggttccaaaccaccaagtaaaacacctcagcgtggtcccgccatctccccgaca
accaacctgccaatcactacaaccaacctatcagaggcaacacagcagcctgagggggcg
gataaagaggtcacaccagtcaatgaaggacaagaaaaagctgagattggggaaagtaat
acagaaaaccaggttgtccaatcagaagtctcacctgacacaactactagccaatcaggc
acatccttatctaaccactctacagaggagttaggggcagagacatctcctgacctatca
aatggcctatcacctaaagcccctcctctcctaagggaattggacacagaactcctccaa
tcaggaaagctgatgttgacaggtacggtggacaggctgggacgggctgtggttgtcact
gaaacgcacttaccagaggacggttgccgtgcggacgagatgggccgtgtcttggcctgt
tatcacaggatcacccgctcttctgctaaagagcgaggcctaacagtaatagtagacagt
agacaatctcctccctccgctctctgcctcgctgcactgaaacaattacaggctgtggtc
ccgggaggtcttggctctgtcctcattctggtggaggagcagcagcaggagtcatctaca
cacagtctagaaggagtagaggtgcacacggtgcgagggacaggggtccttcagcagtat
atagacaggcagcagctgcccctggagatggacggagactacaaacattgccactctgac
tggctggccttcagactgagtgtggagagtctaactgagtgttgtgagagcgcactctct
ctgttggaggatgcactgcagtctatgggcacagcaccactaccagactgtatcaagact
gttcctctaagtgtggaaaaacacagacagctgatgacgagcatcctagtcgaccaacgg
ctgactgagctgcagcgcaagggtggggcctggctggcagggctggccaatggcacatca
ggactggcaaagcggtccccagactgcagagctgctctggctgcgacctctaacctctat
gacagcgtggatgattccctccaccgcctcgtccaggtgtccaatcagaggggcagtgac
ctggaagcccttggacgattggctgccatggtggacaagctggaaaagtgcgagagggag
atagagcagatccaggatcagttggaagactacagggagcctcccatctctctcagcagg
ctctccctcaaacagcagaagttcaagactttcagagagtcggccaacgagctgcacact
gagaccctggcgattcttggagatctggagagctggtctgagctggactgggggggactg
atagaggtgcaggtcagggtacccccggtcagagagagactcagagacatgtctcactgt
ctgtctgactgctggacaacactggacaacacacagagactactgtccacactgaccgag
gccaaccagtggtgcgacgtcatctcctccacctctccctccccctccacccccctctcc
tccctccctcccattccgccatctcgttttcaggacgcccgtgccttagccttggagctg
ggtggtggagctctcctggacctgtggtctcagacccttgagagataccaacgcactgtg
gcccaggtcaaacccaggctgctgcagcaggcagagcgagggcagaaccagggccaggcc
cggcccaagaccccctccgcctccagtctgtgggacctgatggggcccgagggagaggga
gactggggtgtcggggccgggggaggggagggaggcctccagtcctgggggtccctggct
tcactgtttcgcccacagacctgctccacgctgaagataggagaggagaaagggaataag
aaggagggaatgggaggaggtggaggaggagcgggaggagggaaatttctgcagaatctg
ttgcatccggcaaagaagagccccacagaagcccctttgccccccaaaccccccaggaag
cgtcaccccagcttcgacctccaggccctgctggccccccgtcggggccctgcaaccgcc
aggcctgtagagcctcctgtgggtgcagccagccgtaactcccccctcacctggctgggg
cgccgggccctcacagaccctgttatcaccgctgggatggcagccgccgtccccggatgg
agagagggaggaggaggaggaggagggattgggggaggaataggaggggtgcagggggga
tcaggggtgctcatcagaggtgtagaggtgagcagcaaggaagtggtggactataccgga
acgccaagacaacacgtgctgctgagccgagcggagagggagacgggaggggagaggcag
ggcaccaccaccgcacagagtaaactgtacctattgtggtgcaggatgctgagttcagag
aggcagtacgtggctgtattaaagggggtggaagagacctacttgcccctcctggagggt
ccagacaccccctcctccctcagggggaaagcagatctcctgttccccaaatgggccagc
ctcagctccttccactcacagaacctcctcccagccatggagggagctctactgcagagt
ctgctgcaacaggacctcttcagtaaatacagagaggagtttctccagtactctcactac
atcaggattaaaccagaattggactccccgttggttactcaagctgcagactttttcaag
ctcagactcccggccacccctcctctctcccccctgtcgttcccccattgtctccaggcc
cctacactgagactggaacagtactgcgatgccttggaagagctgggagggctaaaccct
gcctccgactcctccctctccgtcctcagacacgtccagcgtcacggcgaggacctccgg
gccagcgacctaatcgtcgggtgtccggtcccagtggcggagcgcggagagctggtgcgt
cagggggagctgttggtgtgtggggggaccaggaggaagaagacaggggtgaggagtgtg
ttcctctatcagcacctcatcatcttcaccaagcagaagagtcccggcccaggacgcacc
gcctacagcttcaaacacagcatcaagacgggtgagatgggtctgacccagagtgtgggt
gaggagggggtgaggttcgaggtgtgggtgcgtcaggcccctcgtatccgggactgcctg
accctgcagtgtcagagtggagaggggagggcagcctggacacacgacatcgctcagctc
ctctggactcacgctatacacaacacagagttgtgtttgaaagagacaatgtgtatcggt
gtgtctagtaagatactgctagacgccacaggagcaccggtaacatctgaactcgactct
atctacaatctgaatgacagagtccacagtagctgttcagactcttcctctgttggcagt
cagaaggagggggggtcgccagcctctgggaggggacaaacacagaaccagtctccttcc
actgcggtgtaa
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integrated database retrieval system
