Oncorhynchus mykiss (rainbow trout): 110500883
Help
Entry
110500883 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110500883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110500883
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110500883
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110500883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8_fungal
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf-UDP
PHD
Motif
Other DBs
NCBI-GeneID:
110500883
NCBI-ProteinID:
XP_036814016
LinkDB
All DBs
Position
21:50598799..50615280
Genome browser
AA seq
758 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRNDPRGGSVVLGQVDTRLSPYIVDLH
SMHQFRQDTVLWRDPRLSTVTPGTLRPVRRSFYDPTSAPGQGWLWEWENDTGSWTAYDTE
VGIAIQAARDRQQPWLDLAPLGFCYLIHFQSMTQINGQTQRCRRIQRRSDLAYPLVSGPL
PKSHHAWGPGPGGLLGVSGVGMGVGLSGMGNGNGSAYPSGALPASAITSLGQPCACQQCM
LLLSVKAGAMATAHTLGRRPPQNKPPSPKLGGGYSAMGGSYSLTLPRPPSSMGRSLPPHR
TSVGGASGGLGVGGGGGFAHSLSLLGSATAALSLSSTRPPPPPLPPLPPPPPPPPSSITS
NSATLPPSSSFSMASMASSAPLSMPAPPPLISTSASSCTPSPSARVLGPVSSAAAACAAP
LPPRASLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAA
GLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGKTPEEVVKRYLQKVR
SPPEEDCTICMEALPGPSGYKGPGVGGIQRAESVGRLAQCGHQYHLQCLVAMYNNGNKDG
SLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQGPEHPNPG
KPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKT
EFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLPRD
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgttactagcgtcggccgtggtggtatgggaatggctgaacgagcacgggcgctggcgg
ccttacagcccagcggtctctcaccacatcgaggcagtcatccgcaacgacccacggggt
ggtagtgttgtcttaggccaggtggacactcgcctctcgccctacatcgtcgacttgcat
tccatgcaccagttccgacaagatactgttctgtggcgtgaccctcgtctttctaccgtt
accccaggtaccctcagaccggttcgccgcagcttctacgaccccacgtcggcgccgggt
cagggctggctgtgggagtgggagaacgacacaggctcgtggacagcctacgacacagag
gtgggcatcgccatccaggcggcacgcgaccgccagcagccctggctggacctggcgcca
ctgggattctgctacctcatccacttccagagtatgacccagatcaacgggcagacgcaa
cgctgccgccgcattcagcgccgctctgacctggcttacccacttgtttcgggtcccctt
cccaagtcacaccacgcctgggggcccggccccgggggactgttgggggtgtccggagta
ggcatgggggtggggttgagcgggatggggaacgggaacggtagcgcctaccccagcggt
gccctgccagcctccgcaatcacctccctgggccagccctgcgcctgtcagcaatgcatg
ctgctcctaagcgtcaaggcgggcgccatggcaacagcccacaccctgggcaggaggcca
ccccagaacaagcctcccagccccaaactgggtgggggttactcggccatgggggggtcc
tactctctcaccctcccacgtcccccctcctccatgggcaggtcccttcctccccacaga
acgtctgtgggcggagctagcggtggcttgggggtcggagggggcggtggctttgcccac
tcactctccctcctgggttcggccaccgctgccctgtccctctcctccacacggccccct
cccccgcctctacccccccttccgcctcctccgcctcctccgccctcctccatcacttcc
aacagtgctactcttcccccctcctcttccttctccatggcatccatggcttcctctgcc
cctctgtcgatgcccgcgcccccccctctcatctccacatcagcttcctcctgcaccccc
tcgccctctgcccgcgtcctggggccggtgtcttcagcggcggcggcctgtgccgcccct
ctacctccccgtgccagcctggctgggctgagccgacccgccctgcagcgcatcgccatg
gcccagtccagagcccttatcgcctccggagtcccaacggttcctgtgaagaacctcaat
ggatccagccctgttcaccctgcattggcaggtattacagggatcctgatgagcgccgca
ggacttcctgtctgtctgacccgaccccccaagctggtgctccacccccctcctgtcagc
aagagtgacattaagcccgttcccggcctcggccactgctgccgcaagaccaccaagaag
caggctcgcaaaggcaagacccctgaggaagtagtgaagaggtaccttcagaaggtacgc
agtcctccagaagaggactgcactatctgcatggaggccctgcctgggccctcgggctac
aaaggccccggtgttgggggcatccagcgggcagagtcggtgggtcgcctggcccagtgt
gggcaccagtaccacctacagtgtctggtggccatgtacaacaatggcaacaaggatggc
agccttcagtgccccacctgcaagaccatctacggcgtgaagacgggcaaccagccgcct
ggcaagatggagtatcacgttatcccccattcgctgcctggccaccccgactgcaagacc
atccgcatcatctataacatcccgccaggcatccagggccctgagcacccgaacccaggc
aagcccttcaccgcccggggattcccccgacactgctacctccctgacagcgagaaggga
cgcaaggtactgaggctgctgctggtggcgtgggaccggcggctcatcttctcagtgggc
acatccagcaccacgggcgagtcggacacagtcatctggaatgaggtgcaccacaagacg
gagttcggctccaacctgacgggacacggctaccccgacccaggccacctggacaacgtt
ctggaggagcttaaggcccaggggatcaccgaggaggagtgcctacccagagactga
DBGET
integrated database retrieval system
