Oncorhynchus mykiss (rainbow trout): 110500892
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Entry
110500892 CDS
T07259
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110500892 (sorcs2)
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110500892 (sorcs2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
DUF6786
InlK_D3
Motif
Other DBs
NCBI-GeneID:
110500892
NCBI-ProteinID:
XP_036814131
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All DBs
Position
21:complement(54518078..54925493)
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AA seq
1148 aa
AA seq
DB search
MSAIMARNMVPLRPKGTVSAHLCRAVFIASAWMSLMGPVRCDSRSDAHRMLDSGIGIDRR
DGMFGQDLGDNDMDMESRRFRRALSQEKVSLLSSSFVLKGDATHNQAMVHWTGENSSVIL
ILTKYYHVDSSKVLESSLWRSSDYGTTYTKLNLMPGTTIVVSNFYICPTNKKKVILVSSS
INERDQLLFISTDEGSSFQRQPLSFTAETLLFHPKEEDKVLAYCKEGKLYVSMDLGRKWT
LMQERVTKGRIFWSVAGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKTVTAQFLGKID
HNSLSVQDDYIFVKVTTGNRTKHYVSYQRNEFVQMSFPKYALPKDVHIVSTDESQVFLAL
QEWYQTDSYNLYQSDPQGVYYSVVLENVRSAKQPEESVVIDILEVRGIKGVFLANQKVDG
KVRTLITYNKGRDWEPLAPPTTDMNGKPVNCKSPDCHLHLHLRWADNPYVSGTVHTKDSA
PGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPL
KILKFSIDEGRTWTIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQ
SFPRQCTEGDYDSWKLTDLQGEKCIMGQERSFRKRKDTAFCIKGRSYTSALTTKPCQCSE
KDFNCDYGFERAQSLKTEGDRCFADFWHDPDSPPDDCHQGHNFQSSTGYRKVVSNLCEGG
VNKQQSAKLHTCPLLPPRGLQLGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQVDLGDG
MRAIYQNLTVTDEPIQHRYEQQGVYRVTVKAENVAGHDQATIYIQVTAPLQEVHLEVVPI
AGINQEVNLTAVVLPFEANLTVFYWWIGDNLQPKMSLGNSLITRFPEEGEVSVTVQASNG
RSMVQDTKNVHVYDRFQVIPLAFSSNLDRLNPNIPEWREDVGQVVTKILAKITGIPQVSL
VTMVKRGLPTTADLYVLPPESQRDKRSVFVDKRIPAIKQAFNDNNVSFIVRGGLQVLVTL
ADPNAGSQGGVAGPGVWALSVIFLISLLATGSFILYKFKSPWLRTEDAYPPLFFRKLPGR
NVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNAEGNHSGVVLSINSR
ELHSYLTS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctataatggcgcgaaacatggtacctctgcgtccgaaaggaacagtttcagcg
cacctgtgccgggctgtgtttatcgcctcggcttggatgtcactgatgggacccgtgcga
tgtgacagccggagcgacgcgcatcgtatgcttgacagcggtataggcatagacaggaga
gacggaatgttcggacaggacttgggtgataatgatatggacatggaatcccggcgcttc
aggagagctctatcccaagagaaagtgtccctgctcagcagctcgttcgtgctcaaaggg
gatgccactcacaaccaggcgatggttcactggacgggggagaacagcagcgtcattctc
atcctgaccaagtattaccacgtcgactccagcaaggtcctggagagctccctctggaga
tccagtgactatggcaccacctacacaaagctcaacctgatgcctggtacaaccatcgtg
gtctctaacttctatatctgccccaccaacaagaaaaaggtgatcctggtgagttcgtcc
attaacgagcgggaccagttgctgttcatcagtacagacgagggctcctctttccagcgc
cagcccctctccttcactgctgagaccctcctcttccaccctaaggaggaggacaaggtg
ctggcttactgcaaggagggcaagctctacgtgtccatggatttgggccggaagtggact
ctaatgcaggaacgagtaaccaagggcagaatattctggtctgtggctggtgtagatgtg
gaccctgacttggtgcatatggagatgcaggacacaagtggagggtacctgtatgtaacc
tgtctgatccagaactgctcagacaagaccgtaacggctcagttcctggggaagattgac
cacaactctctctcagtccaggacgactacatatttgtcaaggtgaccacaggaaaccgc
accaagcactatgtctcataccaacggaacgagtttgtccagatgagtttccctaaatac
gccctaccaaaggacgtccacatagtgagtactgatgagagccaggtgttcctggccctg
caggagtggtaccagacagacagctacaacctgtaccagtcggacccgcagggtgtctac
tactccgtcgtgctggagaacgtccgcagtgccaagcagccggaggagagcgtcgttata
gacatactggaggtgcgcgggatcaagggggtcttcctggccaatcagaaggtggatggc
aaagtgcggactctcatcacctataacaaaggccgagactgggaaccgctagctccgcct
actactgacatgaacggcaaaccggtcaactgcaaatcacctgactgtcacctccacctc
cacctgcgctgggctgacaacccctacgtatcagggaccgtccacaccaaagactccgcc
cccggactcatcatgggcgcaggtaacttgggttcccagctggtggagtataaagaagag
atgtacatcacctctgactgtgggaagacctggagacaggtgtttgaggaggagcatcac
atcctgtacctggaccatggaggggtaatcgttgctatcaaagacacctccatccctctc
aaaattctcaagttcagtattgatgagggacgcacgtggaccatccacaacttcacaagc
acctcagtgttcgtggacggacttttgagcgagccgggagatgagacgttggtcatgacg
gtgttcggtcacatcagctatcggtcagactgggagctggtcaaggtggacttcagacag
tcattccccagacaatgtacagagggagactacgactcctggaaactcacagatctgcag
ggagagaagtgcatcatgggtcaggagaggagtttcaggaagaggaaggacactgcgttc
tgtatcaaggggaggagctacacctccgcccttactaccaagccctgccagtgctccgag
aaagacttcaactgtgactatgggtttgaacgtgcccagagcctcaaaaccgagggagat
agatgcttcgctgacttctggcacgacccagactcaccgcctgacgactgtcaccaggga
cacaactttcagtccagtactgggtacaggaaggttgtgtccaacttgtgtgagggggga
gtgaacaagcagcagagcgccaagctgcacacctgtcctctgctgccgcccagaggcctc
cagctgggcatcaaaggacagatgctggctgtggcgcctggtgatgacatcaccttcatt
gtccaccaggagcagggtgacaccagcagcactaagtaccaggtggatctgggggacggg
atgagggccatctaccagaacctgacggtgacagacgaacccatccagcaccgctacgaa
cagcagggagtctaccgcgtcaccgtcaaggctgagaacgttgccggacacgaccaggcc
accatatatatccaggtcacagcccctctacaggaagttcacctagaagtagttcccatc
gccgggattaaccaggaagtcaacctgacagctgtggtgcttccctttgaggccaacctg
actgtcttctactggtggataggagacaacctgcagcccaagatgtccctggggaacagt
ctgataacgaggttccctgaggaaggagaggtgtctgtcaccgtccaggcctctaacgga
cgctccatggtgcaggacaccaagaacgtccacgtctacgaccgtttccaggtcatcccc
cttgccttcagcagtaacctggaccgcctcaacccaaacattccagagtggagggaggac
gtgggtcaggtggtcaccaagatattggcaaagatcacaggtatcccccaggtgtccctg
gtaaccatggtgaagcggggcctgcccaccacagctgacctgtacgttctcccaccagag
agccagcgtgataagaggagcgtgtttgtggataagcgtatccctgccatcaagcaggcc
ttcaacgacaacaacgttagcttcattgtacgaggaggtctacaggtgttggtgacgcta
gctgacccgaacgcaggttctcagggtggagtggcaggtcctggagtctgggctctgtct
gtaatcttcctcatcagcctcctcgctactggatccttcatcctctacaagttcaagagt
ccttggcttaggactgaggatgcctatcctccgctgtttttcagaaagctgcccggccgg
aacgtgtacgcccagatgcacaacgagaaggagcaggagatgaccagccctgtcaatcac
agtgaggacacgcagcacatcatccagggggaggagtttatcgacgacgacctggactca
cagactctaggtaacgcagaaggtaaccactcgggcgtggtgctgagcatcaactccaga
gagctgcacagctacctgaccagctga
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