Oncorhynchus mykiss (rainbow trout): 110500938
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Entry
110500938 CDS
T07259
Name
(RefSeq) homeobox protein SIX6-like isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110500938
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
110500938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110500938
NCBI-ProteinID:
XP_021434117
Ensembl:
ENSOMYG00000027274
UniProt:
A0A8C7VXX3
LinkDB
All DBs
Position
21:complement(42066013..42070702)
Genome browser
AA seq
266 aa
AA seq
DB search
MFPLPMFTPEQVARVCENLEETGDIERLGRFLWSLPDAVPGSAGEALNRHESVMRARALV
AFHGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFP
LPRTIWDGEQKTHCFKVRHQAERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNW
FKNRRQRDRAASAKNRLQQDPTHLPSGCSPEGSVQERHSHHPRLLTASPCHPGSPEASDC
STGTDPRGTGASTPDISVSSDSEFES
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttccctttgcctatgttcaccccggaacaagtggctcgggtgtgcgagaacctcgaa
gagaccggcgacatcgagcgcctgggtcggttcttatggtccctgcctgatgctgtccct
ggctccgccggggaggctctcaaccgccacgagtcagtgatgcgcgcccgggcgctggtc
gccttccacggaggaaacttcgaggcgctttaccagatcctccagagccaccgctttaca
cgcgagtctcacgccaaactccaagatctgtggctggacgcgcattaccgcgaggcagag
cggctccggggccgtcccctgggaccggtggagaagtaccgtatccggaagaagttccca
ctgcctcgcaccatctgggatggcgagcagaagacgcactgctttaaggtgagacaccaa
gctgagagaactcgtagcctgctcagggagtggtacctccaggacccctacccaaacccg
tccaggaaacggcacctggcccaggctacgggactcacgcctacacaggtcggcaactgg
ttcaagaaccgacgccagagagacagggccgcgtcggcaaaaaacagactgcaacaggac
cccacccacttgccttcgggatgctcccctgagggttctgtccaggagcgccactcccac
cacccccgcctgctgactgcctccccctgtcacccgggcagccccgaggccagcgactgc
agcactggcaccgaccctcggggcactggagcctccacccccgacatctccgtcagcagc
gacagcgagtttgaatcctga
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