Oncorhynchus mykiss (rainbow trout): 110500983
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Entry
110500983 CDS
T07259
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110500983
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110500983
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
Cpta_toxin
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
110500983
NCBI-ProteinID:
XP_036837542
LinkDB
All DBs
Position
6:complement(94769157..94854085)
Genome browser
AA seq
1573 aa
AA seq
DB search
MERWSVLKHTQATPTDTYGIMEFQGGGHVNKAMYIRVAYDSKPDNMLHLMVKDWQLELPT
LLISVHGGLQNFDLQPKLKQVFGKGLIQAAVTTGAWILTGGVSTGVIRHVGDALKDHSSK
SRGKVCAIGIAPWGIVENKEDLIGRDVTRPYQAMSNPMSKLSVLNNSHSHFILADNGTQG
KYGAEVRLRRQLEKHISLQKINTRLGQGVPLVCLILEGGPNVISIVLESLREDPPVPVVV
CDGSGRASDIISFAHRYSEDDGLVSDSVKDQLLVTIQKTFNYNRGQAQQIFLMVMECMKK
RSLITVFRMGSEGQQDIEMSILTALLKGTNASAPDQLSLALAWNRVDIARSQIFVYGHHW
PMSGSAANATASQEKTKSPVPVRGGGGGAGKGKARVKKGKGGKAKPEPPEETDPRKLELR
NWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLTIPRLEELYNTRLGPTNTLHFVVR
DVKKGNLPPDYQITLIDIGLVLEFLMGGAYRCNYTRKQFRTLYNNLYGLKRPKALKMLGL
EDDEPGGTGKSKGKKKKKKKEEEIDIDVDDPEVSRFQYPFHELMVWAVLMKRQKMALFLW
KRGEEAMAKALVACKLYKAMAHESSQSELVDDIFQDLENNSKEFGQLAYELLDQSYKHDE
QVAMKLLTYQLKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGCLRMGKRNGFKVI
FGIIFPPSILLMDFRLGEEVICQAPAENEEAKDKDDDNKSSKEVNADAVSRKGDEEESAV
KKRRVPIGKKIYEFYNTPFTKFWFNTISYLAYLCLYNYIILVKMERWPSLQEWIVISYII
TLGMEKVRQILMSEPGKLKQKINVWAEEYWNITDAAAIFTFLLGLMLRLQSEPLLGIGRV
IYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAILH
PDEIPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGDNMYDEDGKKLPPCIPGA
WLTPAIMACYLLVANILLVNLLIAVFNNTFLEVKSVSNQIWKFQRYQLIMKFHDRPLLPP
PLIIFSHIYIVLKHVCRRCKRRTEGEQDDRDNKGLQLLLNAEELKALYDFEEQCVEEYFR
EKEDEEQSSSNERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDLRLGQLEEFSGRMM
NALEKLAGVDHNDLVRTQSGVSSVCDTSSLLRHSSINSSDGYSLYRYHLEMGDDTRSEAG
DIRSPERKGSQRKVVERKRSMRETTTSITASVKEYGATLDVVGPRERNHSSSSVSVCEGV
KETPTQRPEVPTEPSPPPCSPAASMDTALEKAGVTMEKIKLEAAISYPLERVRSLQYQSP
ETHSDCLTSRPRSRSTMVYNPADGGDEGATWATDVNNPLTGDQETVTSRSPTMGHWAARF
EYKVHPCPFGHMPKVSMEKLVPTTTDTKDEAEAKETDSEPQEPGKSQSESNQDGGEEKQE
AEAKDTGGGLLLVAEDRMYPSLRSKSLNTNPRKVKARGDWAQRTKSDSSVKDLTAMLVGT
GETETEVETDRQY
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggaacgctggtccgtgcttaaacacacacaggccacgcccacagacacatacggcatc
atggagttccagggaggaggacatgtcaacaaggccatgtacatccgtgtggcgtacgat
tccaagccagacaacatgctccacctgatggtgaaagactggcagctggagctccccacc
ctgctcatctccgtccacgggggactgcagaacttcgacctgcagcccaaactaaaacag
gtgtttggaaagggtctgatccaggctgcggtcaccaccggagcctggatactcactggc
ggagtcagcactggggtgatccggcatgtaggagatgcgttgaaggaccactcctcaaag
tccagggggaaagtatgtgccatcgggatcgctccatggggcatcgtggagaacaaggag
gatctgataggaagagacgtgacacgtccgtaccaggccatgtccaaccccatgtccaag
ctgtctgtcctcaacaacagccactcccacttcatcctagcagataacgggacccaggga
aagtacggcgcagaggtccgtcttcgccgtcagctggagaaacacatctccctgcagaag
atcaacacacgtttgggtcagggggtgcctctggtctgtctgatcctggaggggggtccc
aacgtcatctccatagtcctggagagcctgagggaggacccccctgtcccggtggtggtc
tgtgacggcagtggacgggcctctgacatcatctccttcgcacacagatactctgaggac
gacggcttggtcagtgatagcgtgaaggaccagctcctggtcaccatccagaagacgttt
aactacaaccgcggtcaggcccagcagatctttctcatggtgatggaatgcatgaagaaa
cgatctctgatcactgtgtttcgtatgggctcagagggccagcaggatatcgagatgtcc
atactgacagccttgctcaaaggcaccaatgcctctgcccctgaccagctgagtctagcc
ctggcctggaacagagtggacatcgctaggagccagatcttcgtctacggtcaccactgg
cccatgagtggcagcgcggccaacgccacggcatcccaggagaagaccaagagcccggtc
ccagtccgcggtggaggtggtggggcagggaagggcaaggccagggtcaagaagggcaaa
ggaggcaaggccaaacctgaacctccggaagagacggaccccaggaagctggagctacgc
aactgggtgaactctctggagcaggccatgatggatgccctggtgctggacagggtggac
ttcgtcaagctgctgatagagaacggtgtcaacatccaccacttcctcaccatccctcgt
ctggaggaactctacaacacgaggctgggcccaacgaatacactgcactttgtagttaga
gacgttaaaaagggaaatcttccaccggattaccagatcaccttgatcgatatcggattg
gtcctggagttcctgatgggcggggcctatcgctgtaactacaccaggaaacagttccgc
accctctacaacaacctctacggtttaaaaagaccgaaagctttaaaaatgttaggactg
gaggacgacgagcctggaggaacaggcaagagtaaagggaagaagaagaagaagaagaaa
gaggaagagatcgacatcgatgtggacgacccggaggtcagccgcttccagtacccgttc
catgagctgatggtgtgggccgttctcatgaagcgtcagaagatggctctgttcctgtgg
aagaggggggaagaggccatggccaaagctctggtggcctgtaagctgtacaaggccatg
gcccacgagtcgtctcagagtgaactggtggacgacatcttccaggacctggaaaacaat
tccaaagagtttggccagctggcctacgagctcctagaccagtcctataagcacgatgag
caggtggccatgaaactactgacctatcagctaaagaactggagcaactctacctgcctg
aaactggctgtagccgccaagcacagagactttatcgcccacacctgcagtcagatgctg
ctcactgatatgtggatgggatgtctgagaatgggcaagaggaacgggttcaaggtgata
tttggcataattttcccaccttcgattctcctcatggattttcgactcggggaggaagtg
atatgtcaagccccagcggagaacgaagaggcgaaggacaaagacgacgacaataaatcc
agcaaggaagtgaatgctgatgcggtgtccagaaagggggatgaagaagaaagcgccgtt
aaaaagagaagagttccaatcggaaagaagatctatgaattctacaacactcctttcaca
aaattctggttcaacacaatctcctacctggcctacctgtgtttgtacaactacatcatc
ctggtcaagatggaacgctggccgtccctgcaggagtggatcgtcatctcttacatcatc
actctgggaatggagaaagtcagacagatcctgatgtcagagccggggaagctgaagcag
aagatcaatgtttgggccgaagagtactggaacatcacagacgcggcggccatctttacc
ttcctcctgggcctgatgctgaggctgcagagcgagcccctcctgggcatcggacgggtc
atctactgcgtggacatcatcttctggtacatcagggtgctcgacatcttcggggtcaac
aagtacctgggaccctacgtcatgatgatcgggaaaatgatgattgacatgttgtacttc
gtggtgatcatgctggtggtgttgatgagtttcggcgtggcgcggcaggccatcctgcac
cctgatgagatcccaacatggcgtctggccaggaacatcttctacatgccttactggatg
atctatggggaagtgttcgctgactccatagacctctatgcaatggaaatcaatccacca
tgtggtgataacatgtacgatgaggatgggaagaagcttcctccttgtatccccggagcc
tggctcactccagccatcatggcctgctacctgctggtggccaacatcctcctggtcaac
ttactcatcgctgtcttcaacaacaccttcttagaggtcaagtccgtctccaaccagatc
tggaagttccagcgttaccagctgatcatgaagttccacgaccggcccctcctccctccg
cccctcatcatcttcagccacatctacatcgttctaaaacacgtctgtcgtcgctgcaag
aggagaacagagggagagcaggacgacagggacaacaaaggactacagctgctgctgaac
gctgaggagctgaaggctctgtatgactttgaggagcagtgtgtggaggagtatttcaga
gagaaggaggacgaggagcagtcgtctagcaacgaacgcattcgggtcacatctgagagg
gtggagaacatgtcgatgcgtctggaggaggtgaacgagagggagcactccatgaaggct
tccctgcagacggtggacctgcgactgggtcagctggaggagttctctggacgtatgatg
aacgccctggagaagctggccggggtggaccacaacgacctggtcagaacccagtcgggg
gtctcctcagtctgcgacacgtcctctctgctccgccacagctccatcaacagctctgac
ggctacagtctgtaccggtaccacctggagatgggagatgacacccgctctgaggctggg
gacatcaggagccctgagaggaaggggagccagaggaaggtggttgagaggaaacggagt
atgagagaaaccacgaccagcatcacagcctctgtgaaggagtacggagccacgttagac
gtggtgggccccagagagaggaatcattccagctccagtgtctctgtctgcgaaggggtg
aaggaaaccccaacccagaggcctgaggttcctacagagccttctccaccgccctgcagc
cctgctgcctcgatggacacggccctggagaaggcaggcgtgaccatggagaagatcaag
ctagaagcagccatctcataccctctggagagggtcaggtccttgcagtaccagtcaccc
gagacccacagtgactgtctcacctccaggcccagatccaggagcactatggtgtacaac
ccagcggatgggggagatgagggggctacttgggccacagacgtcaacaaccccctcaca
ggggatcaggaaacggttacctccagatctccgaccatgggtcactgggcagcgcgcttc
gagtacaaagtccacccctgcccgttcggccacatgcccaaagtctccatggagaagcta
gtccccaccaccacagacacaaaggacgaggcagaggccaaagagacagacagtgaacca
caggagccagggaagagccagtcagagagcaaccaagatggaggtgaggagaagcaggaa
gcggaggctaaagatactggtggaggccttctgcttgtggcagaggacaggatgtatcca
tcactgaggtctaagagcctgaacaccaaccccagaaaagtgaaggccagaggggactgg
gcacagagaaccaagtcagacagtagtgtgaaagacctaacagctatgttagtagggact
ggggagacagagacagaggtagagactgacagacagtattaa
DBGET
integrated database retrieval system
