Oncorhynchus mykiss (rainbow trout): 110501036
Help
Entry
110501036 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110501036
04131 Membrane trafficking [BR:
omy04131
]
110501036
04121 Ubiquitin system [BR:
omy04121
]
110501036
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110501036
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
110501036
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110501036
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110501036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-RING_5
P53_TAD
AraC_N
Motif
Other DBs
NCBI-GeneID:
110501036
NCBI-ProteinID:
XP_021434210
LinkDB
All DBs
Position
21:complement(24165061..24177940)
Genome browser
AA seq
517 aa
AA seq
DB search
MAVQNCWILAGTGTCCACGTCQSRASQTCSMGDMSDNDLQGTDGSGSLGGPDVRRRIPIK
LISKPTIRSKPAPRTQRPMGRQPSKPQAGDEESFSFKQEERFDSGTKAGDVFASQRRFPQ
QMFWDFKLNLIGEKDDIPAHFCDKCGLPIRIYGRMIPCKHVFCYECALLHEKKGDKMCPG
MQLFSCTDPVQRIEQCLRGSLYMCSIVQGCKRTYLSQRDLQAHINHRHMRAAKALASRQD
ALHLPPSTEVPDRFRVPPPHLPKTQGHLPPSLQHGGHDPYSQPPQASHDAPPLSQETFRI
ATVTTRARSNLITVPIQDDSGSSSTSSSRDPLPPGPGPAPPPHHHPDYPGQPVVSHPHHM
MAPPQQHYGPPPPPPPPINHPMQHPPQGSGTPHMVYNQAGPPPPMSNAPPPITPPPGHIM
GQMPPYMNHPPPGPPPQHGGPPVNAPPPHHYNPNSMQQFPEDQGTLSPPFNQQGGLSPGM
WPAPRGPPPPRMQGPPPQGQMPGPHHPDQSRYRPYYQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaaaattgctggatattggcgggaactggaacatgctgtgcctgtggtaca
tgtcaatctagagcatcccaaacatgctcaatgggtgacatgtctgacaatgacctgcaa
ggcacggacggctcggggagtcttgggggccctgatgtccgcagacgcatccccatcaaa
ctcatctccaaaccaaccatcaggagcaaacctgctccccggacacaaagacccatgggc
aggcagccctccaaaccccaggctggggatgaagagagttttagcttcaagcaagaggag
aggttcgacagtggtaccaaggctggggatgtgtttgcaagtcaacggaggttcccccag
caaatgttttgggactttaagttgaatttgataggtgaaaaggatgacattccagcacac
ttttgtgacaagtgtggtctgcccataaggatctatggacgcatgattccatgcaagcat
gtgttctgttatgagtgtgctttgctccacgagaagaagggagacaagatgtgcccaggt
atgcagctcttcagctgcacagacccggtccagcgcatcgaacagtgtctgcgtggctcc
ctctacatgtgcagcatcgtgcaaggctgcaagcgcacctacctttcccagcgtgacctg
caagcccacatcaaccaccgccacatgagggcagccaaggccttggcaagccgccaggac
gccctgcaccttcccccatccacagaggtgcctgaccgcttccgtgtgcccccccctcac
ctgcccaagactcaagggcacctcccgccctccctccaacacgggggtcatgacccctac
agtcagccaccacaggcttcccatgatgcacctcctctttcccaggagacctttcgcatc
gccacggtaactacacgcgcacgcagcaacctcatcaccgtgccaatccaggatgactcc
ggttcttcctccacctcttcctcccgtgaccctctccctcctggcccgggccctgctcca
cccccacaccaccaccctgactaccctggtcagcctgtagtgtcccacccccaccacatg
atggcgccaccgcagcagcactatggccctccgcctcctccccctccacccatcaaccac
cccatgcagcacccgccccagggctctgggacaccccacatggtgtacaaccaggccggc
cctcccccgcccatgtccaacgcacctcctcccattacccccccgccaggacacatcatg
ggtcagatgcccccctacatgaaccaccctcctccaggccccccacctcaacatggtggt
cctccagtcaacgctccccctccccaccactacaaccctaactccatgcagcagttccct
gaggaccagggcacactcagtcccccttttaaccagcaagggggtctgagccctgggatg
tggcctgcccctagagggcctcctcctccaaggatgcagggccccccacctcagggccag
atgcctggaccccatcaccccgatcagtcccgctaccgcccttattatcagtaa
DBGET
integrated database retrieval system
