Oncorhynchus mykiss (rainbow trout): 110501305
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Entry
110501305 CDS
T07259
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110501305 (aff3)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110501305 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
110501305
NCBI-ProteinID:
XP_036814494
Ensembl:
ENSOMYG00000044214
LinkDB
All DBs
Position
22:7912166..7954489
Genome browser
AA seq
1268 aa
AA seq
DB search
MPTVLRDKGKLSNVSLLLRCAFQDMNHSWQSQQPSGGGQAQCFLYNPKDTKQHTTQHKQR
MYSQSKLGGMTHPHLAPHKSMLADDLKLSSDDDDADKGPEQSAPWVVNNSLSEQHTHTHG
GRVRHSSSDSSGSDSYSELEEESSGQRSLNPSPETHSDPGTPTDTQALGCTKEIYHPSTT
QWQLDKWLKKVPKKSSSCDQDPSNHDHAQRATEHRSLSPDPHRAPSPSRPWGIREDYSPS
QSPVPSPRFNYSPRHSPRPSPGYSPCPSPSPSPCSSPCPSPTPRHSPIPSPVLSVCPSPF
PSPRATCSLSSIPQHPPRSPSPSLTHSSPRRYPQVRSPHQESHRPPTWPSLTTSPSHRPK
IRPWTAPVPSTEPKSKPRHSPYPQPPPQHSSRPKSTQTQPVPTPKTTAKAAPALTTELSH
RHKHRPRPSPNSSPKLHSQPSLKHARTLDPKSQHLSTSGQRPKESSRHSHNSNSNPRPSN
GPSLTTRLRTSLSPTPRAKTLPTTDPSRETSSRVGHCSKSSPKPHSLPNSKASSEPRAKF
SPSPRPKVKSWAPAPHSKLPQRKPQSREREQEVDNRRETHAPKRKVDRQTEGKGEHEVER
QTEKQGESQGKKQKERKGERQGERRLAEEQLLRRPWVQSSEEEEEVEERKRRREEREKEK
YKRRRKEQQQSGEWQAVQPKQRPHTNSERRHHPIDPQRHGTKKKRRRKSEEEERQSQPDP
SPPPSPSSPTPVVPPTDSSASSESDSEPDLPPNVTKVPADSTSSQRPIPRRGYQGPGRPA
DSRPRVLYPRRTTASNPGQGHQIQGKQKLYTLVPFGRRELAAASHRGLRNLVVQIDLSLL
NRVPDTTTGTPASHKHSSSSSSASSRQKEAMRHLCIPETERGDSKRKRKSENGIQHHRES
KRSNSQTNGPSAHTESTTHRRLDPHSDTRHNGFLEDYLDSTPLSDTLDPTKPPIKTQNSE
PKMEVECCVGVSGQPRPECEPWGPPLQRAGGQRGTVTNHEPPHHAEYYMHEAKRMKHRAD
AMVDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYAETVELIRYAMKLKNHSGPG
ARQEDQQLAVLCFRCLALLYWQMFRLKKDHALKYSKALLDYFKSSPKVPTTPPIWSDSGK
GTGGPPSSLSPSPSALTLGSHTGSSPSSLISIPQRIHQMAANHLNITNSVLYSYEYWEVA
DSLARDNKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANIFKVPHGLKAFKLA
ALPNVPHM
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcgacaagggcaaactttccaacgtctctttgttgcttcgatgt
gcttttcaggacatgaaccactcctggcagtcccagcaaccctcaggaggtggccaggcc
cagtgcttcctctacaaccctaaagacacaaagcagcacactactcagcacaaacaacgt
atgtattcacagtctaagctcggggggatgacccaccctcacctggcgcctcacaaatcc
atgctcgctgatgacttgaagctcagcagtgacgatgatgatgctgacaagggccctgaa
cagtcagccccctgggttgttaacaacagtctgtcggagcagcacacacacacacatggt
gggagggtgagacattccagctcagactcttcaggctcagactcctacagtgaattggag
gaggagagcagtggccagcgctcccttaacccaagcccagaaacacactccgatcctggg
acacccaccgacactcaggcccttggctgcaccaaggagatatatcacccctccaccact
cagtggcagctggataagtggctgaaaaaagtccccaaaaaatcctcttcctgcgaccag
gatcccagcaatcacgaccacgcccagagagctacagagcaccggtcgctctccccagac
ccccacagagctccatctccatccagaccctgggggatcagagaggactacagccccagc
cagagccctgttcccagcccgcgctttaactacagccccaggcatagccctcggcctagc
cctggctacagcccctgccccagccccagccccagcccctgttccagtccttgtcctagc
cccaccccaagacacagccccatccctagcccggtcctcagtgtctgtccaagccccttc
ccaagccccagagccacctgcagccttagttccattccccagcacccccctaggagtcct
agtcctagccttactcattctagcccccgccgctatcctcaggttcggagtccccatcag
gaaagccacaggcctcccacgtggcctagcctaacaaccagcccgagccatagacccaaa
atcaggccctggactgcccctgtacccagcactgagcccaagagcaagccaagacacagt
ccatatcctcagcctccgcctcagcacagctccaggcctaaatccacacagacccagcct
gttcccactcccaagaccacagccaaggcagcccctgcactgaccactgagctgagccac
aggcacaaacacagacccaggcctagtcccaactcgagtcccaagcttcattctcagcct
agcttgaaacacgcacgcactctagaccccaaaagccaacacctatcaacctctggacaa
aggcctaaggagagtagcagacacagccataattccaactccaaccccagacccagtaat
gggcctagtttgacaaccagactcaggaccagtctcagccccacacccagggccaagacc
ttacccaccacagaccctagcagagagaccagcagcagagttggtcactgttccaaatcc
agcccaaagccacattctctgcctaactccaaagctagttctgagcctcgcgctaaattc
agccccagccctagacccaaagtcaagtcctgggcccctgctccccactcaaagcttcca
cagaggaagccccaatccagggagagagaacaggaggtggacaaccggagagagacccat
gcaccaaagaggaaggtagacaggcagacagagggaaagggggaacatgaggtagagaga
cagacagaaaaacaaggagagagtcaggggaagaaacagaaggaaagaaagggggagaga
cagggagagagaagactggcggaggagcagttgcttagacgcccctgggtccagagctca
gaggaggaagaggaagtagaggagagaaagaggagaagggaggaaagagagaaggagaag
tacaagaggaggaggaaggagcagcagcagagtggtgaatggcaggcggtccagcccaag
cagagacctcacaccaacagcgagcgccgtcaccatcccatcgacccacaacgccacggg
accaagaaaaagaggaggaggaagagtgaggaggaagagagacagtctcagccggaccct
tcccctccaccatcaccctcctcccccactcctgttgtcccacccacggactcctccgcc
tcttcagagtccgactcggagcccgatctgcctcccaacgtcaccaaagtcccggccgac
tccacatcaagccagcgtcccatccccaggagagggtaccagggcccggggaggcccgcg
gatagcaggcccagagtgctctaccccaggcgcaccaccgcatccaacccaggccagggg
caccaaatccagggaaagcagaaactctacaccctggtcccgtttggacgtcgtgagctg
gccgcagcctctcatcgaggcctgagaaacttggtggtgcagatagacctctccctgctc
aacagagtgcctgatactacgacaggcaccccagcctctcacaaacactcttcctcctcc
tcctctgcctcttccaggcagaaagaagccatgagacacctgtgcatccccgagacagag
agaggagacagcaagagaaaacgcaagtcagagaatggaatccagcaccacagagagagt
aagaggagcaactcccagaccaacggcccctctgcccacacagagtctacaacgcacaga
cgtctagaccctcactcagacaccagacacaacgggttcttggaggactatctggacagt
acccctctctctgacaccctcgaccccaccaagccccccatcaaaacacagaactcagag
cctaagatggaggttgagtgttgtgttggggtgtcagggcagcctcggcccgagtgtgaa
ccatggggacctcctttacaacgggcagggggacagagaggaaccgtgaccaaccatgaa
cccccacatcatgctgagtactacatgcatgaagccaagaggatgaagcaccgtgcagat
gccatggtggataagctggggaaggcagtgaactatgtggatgctgctctctccttcatg
gagtgtggaaaagctatggaggagggaccactggaggccaagtctccctataccatgtac
gcagagacagtagagcttatcaggtacgccatgaagctgaagaaccactctggcccaggg
gctagacaggaagaccaacagttggccgtactgtgtttccggtgccttgctctcctatac
tggcagatgtttcgtctaaagaaggatcacgccctgaagtattccaaggctctattggac
tactttaagagttctccaaaagtgcctactactcccccaatctggagcgactcaggaaag
ggcacagggggacctccctcgtccctctcccccagcccctcagccctcaccctgggctct
cacactggcagctccccctcctccctcatcagcattccccaacgtatccaccagatggca
gcaaaccacctcaacatcaccaacagtgtcctctacagctatgagtactgggaggtagca
gatagccttgccagagacaacaaggagttttttaactacttgaacaccctgtcggggccg
ttgactctccacagtagtattgctcatgcagtccagtacaccagacaggctctacagtgg
atacgcatcagtgccaatatctttaaagttccacatggattgaaggccttcaaactcgct
gctttaccaaacgtgccacatatgtaa
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integrated database retrieval system
