Oncorhynchus mykiss (rainbow trout): 110501400
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Entry
110501400 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110501400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110501400
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110501400
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110501400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110501400
NCBI-ProteinID:
XP_021434617
Ensembl:
ENSOMYG00000047669
UniProt:
A0A8C7V9S3
LinkDB
All DBs
Position
22:12288678..12347640
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPNEPVQSISAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAALDSTAMTSPSERVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPMPDCHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPDCYLSERSEQEETDQ
VIYTQALDSNLSNLIKRNNELETLMGKLIQTCQHVECNASRQENKLLEECDLLIDIIQQR
RQMIATKIKEGKAIRLRKLAQQIASCKQIIERSSSLITQADHTLKETDHARFLQTAKSIC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPIIRAELCTASN
DTITVHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYMFIVKAINQAGSRSSEPWKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETLSKKS
HTQDRFTSQGSYGITGNVYIDSGRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWV
LSRCNNSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDIAFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCRD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactagagtcggagctgacctgcccaatctgtctggagctcttcgaggaccca
ctgctcttgccctgcgctcacagcctgtgtttcaactgtgcccaccgcatcctagtctcc
cactgcacccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgtcatcaccctcagccagaggggcctagaaggactgaagcgcaacgtcactctgcaa
aacatcattgaccgctttcagaaggcttccgtgagcgggcccaactcccccagtgagact
cgccgcgagcgggccgccctagacagcacggccatgacctcccccagcgagagggtgcag
tgtcagttctgtgagcaggaccctccccaagacgccgtcaagacctgtgtcacctgtgag
gtgtcctactgcgacgaatgcctgaaggccacccaccccaataagaagcccttcactggc
caccgtctgatcgagcccatgccggactgccacctcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagtagcagcactcagcgaccgctacgagaaa
ctgaagagaactccagactgctatctcagtgagaggagcgaacaggaggaaacagaccag
gtgatatatacgcaagccttggactctaacctcagcaatctaatcaagaggaacaatgag
ttggaaactctgatgggcaagttgattcagacttgccaacatgtggagtgcaacgcatca
agacaagagaacaagctccttgaagaatgtgacctcctgatcgacatcatacagcagaga
aggcagatgatagccaccaagataaaggagggcaaggctatacggctgcgaaagctagcc
cagcagatcgccagctgcaagcagatcattgagagatcgtcgtccctcatcactcaggct
gatcacaccctcaaggagacagaccatgcccgcttcctgcaaacagccaaaagcatctgt
gaaagagtgtccatggcaacagcctcctctcagatcctgataccagagatcaacctaaat
gacacctttgatacgtttgcattggacttcacaagggaaaagaaaatgctggaaagcttg
gattacctcacagcaccaaatcccccaataatccgggcggaattatgtacggcatcgaac
gacaccatcactgttcactggacgtctgatgacgagttctgtgtcgtctcctatgagctt
cagtatgcaatcttcaccggacaagccaatgttgtcagtttgtgtaactcggctgatagc
tggatgattgtgcccaacatcaagcagaaccactacacggtgcatggactccagtgtggc
accaagtacatgtttatcgtcaaggccatcaatcaggcagggagtcgcagcagtgagcct
tggaaactcaagaccaacagtcaaccattcaagttggacccaaagtctgctcacaagaag
ctgaaggtctcccatgacaacctgacagtggagcgagacgagacattgtccaagaagagc
cacactcaggaccgctttaccagccagggcagctacggcatcacagggaatgtgtacatc
gacagcgggcgccactactgggaagccttgataggagggagcacatggtttgctgtgggc
gttgcttacaagtcagcaccgaaacatgagtggatcggcaagaactctgcctcgtgggta
ctgtctcgctgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgaa
ccgtctccccacctgcgtcgtgtgggggtgttgctggactacgatgctggatccctggcc
ttctacgatggcgccggctcacagcacctgtacacgttcgacatcgccttcgctcagcca
gtctgtcccgtgttcaacgtgtggaacaagtgtctgaccgtcctcacagggctgcccatc
ccagaccacctagagggaacagactgtcgggattaa
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