Oncorhynchus mykiss (rainbow trout): 110501436
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Entry
110501436 CDS
T07259
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110501436 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110501436 (gtf2e1)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
110501436 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
110501436 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
110501436
NCBI-ProteinID:
XP_036814690
LinkDB
All DBs
Position
22:complement(14443528..14489125)
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AA seq
452 aa
AA seq
DB search
MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
GSSYADLYTQNVEISMGEQEEQQQRRQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNS
GDDAGGAQVVGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVATGGGAIAAARGSDSE
SDTSESDEDSPTAPPPVAAAQRRPTGMEMEEEEEDDDEFEEVGADESMVMVGGRSFSYRE
VSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcgctgaagcgcctggccaagcag
gtagtgcggggcttctacggggtggagcatgccctggctctggatgttcttatccgcaac
ccctgcgtccgcgaggaggacatgctggagctgctcaagtttgaccgaaagcagctgcgc
tcggtgctcaatacgctcaagggcgacaagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgcctgctggtc
aatgtggtcaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaaccgggcgtcgttccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcagctgtttgaccccatgacagggacgtttcgctgtacgttctgtcagacggag
gtagaggaggacgagtctgcggtgcccaagaaggatgccaggaccctagtggcccgtttc
aacgaacaaatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccccgccctcaaacagagccgggaccgt
gcggcggcggcagcgggtgcagctgccggcggtccccaccgcgaggcctggtccaccaag
ggctcgtcctacgccgacctgtacacccagaacgtggagatcagcatgggggagcaggag
gagcagcagcagcgccggcaggccagcgaggggaaggcacccagggagagacccgtgtgg
ctgacggagagcactgtgcatggaggaacgtacagcgagccagacccactcaagaactcc
ggagacgacgcgggaggagcccaggtggtcgggctcggcggcggccaatcggacgagaac
gaggaagtgatgcgcgccctgctcatccatgagaagaggagcggtgccgggccggcagga
ggcggagccgtagcgacaggaggcggagccatagcggcagccaggggcagcgactcggag
agcgacaccagcgaatcagacgaggactctcccacggctccgccgcctgtggcagcggcc
cagcggcggccgacgggcatggagatggaggaggaggaagaggatgatgacgagtttgag
gaggtgggggccgatgagtccatggtgatggtgggggggcggtcgttctcctatcgggag
gtgagccagaggccagagctagtggagaagatgagctctcaggagaaagaggcctacatc
gagatgggacagaacatcttccaggagatgtacttctga
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integrated database retrieval system
