KEGG   Oncorhynchus mykiss (rainbow trout): 110501452
Entry
110501452         CDS       T07259                                 
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382  Cornified envelope formation
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04514  Cell adhesion molecule (CAM) interaction
omy04518  Integrin signaling
omy04810  Regulation of actin cytoskeleton
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110501452
   04514 Cell adhesion molecule (CAM) interaction
    110501452
   04518 Integrin signaling
    110501452
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110501452
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110501452
   04810 Regulation of actin cytoskeleton
    110501452
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110501452
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110501452
   04515 Cell adhesion molecules [BR:omy04515]
    110501452
   04090 CD molecules [BR:omy04090]
    110501452
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110501452
  Exosomal proteins of breast milk
   110501452
Cell adhesion molecules [BR:omy04515]
 Integrins
  Integrin alpha subunits
   110501452
CD molecules [BR:omy04090]
 Proteins
  110501452
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 110501452
NCBI-ProteinID: XP_036814711
Ensembl: ENSOMYG00000011949
LinkDB
Position
22:complement(14903644..14934324)
AA seq 1093 aa
MVHPIIYFPIHVVLICLLEWTHISGFNLDTLNVLRKDGEPGSLFGFSLAMHRQLNPSDKT
ILLIGAPRAKALANQRANITGGLYSCDITTESDDCLRIDFDNEEDVRVENKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVDTAQESRDITGRCYILSQDLTIDESSDEDGGNWRFCEG
RARGHERFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLERGFYDDGPY
EVGDENRLDPDLVPVPANSYLGFSIDSGHSITKGRGLTIVSGAPRANHCGAVVLLRKENE
ASARLSPEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFMKEGDFGGAVYVYIN
QAGKWDKITPIRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYADAGAGKVYIYHGSA
IGINTKPAQILEGMPNNIRLFGYSLAGNMDLDKNSYPDIAIGSLSDTVLVYRARPIISIQ
KDVKITPKEIDLTKKTCGNSICLTVEACFTYKANPVSYSPKLTIRYAFEGEADRRKQGLP
SRILFLNKSHTDQDFQSTGTLDLRGQNKRACTKTKVKLQDNIRDKLRGIPIEVSLGIQGT
KRQKRQNALPQLVPILDNSQPSKVVTEVNFLKEGCGNDNICQSSLQLEYRFCSKELNQDI
FPPLPMENGLPVISLSDQKDIALEVTVKNRNGDDAHEAKLVGMFPNALSYSGFRSQKMTR
DKPVLCLANQNGSQTECELGNPFKRDSEVTFYIILSTAGISLNTAEINIDLELQTTSTQD
KMGRVKAKAKVVIELLLSVAGVARPSQVYFGGDVKGESAINTEEEIGGLIDYEFKIINLG
KPLKSFGTASLNIQWPKENVDGKWLLYLVKISSTGLEEIPCSPETEINSLKHIQESSTSR
KKREVGGKKSGSKITLLDQKKHKILMCGNGYDARCVVIKCPLQGLDSSAVIALRCRLWNA
TFLENYANLNYLDIIVKASISLDAPAKNMVLRNAETQVRVTVFPEKAVTQYGGVPWWIIL
VAVLAGILMLALLVFLLWKCGFFKRSEHEDSVPIYHAVRIRKEARQFKDRKAKLHSFEKK
QWVTSWNENENYS
NT seq 3282 nt   +upstreamnt  +downstreamnt
atggtgcacccgataatatattttccaattcatgtggtacttatttgtttgctagaatgg
acccatatatcaggcttcaacctggataccttgaatgtcctgaggaaagacggagaaccg
ggcagtttatttggattctctctagccatgcaccggcaacttaatccttcagataaaaca
atactgttgattggagcaccaagagccaaagcactggctaaccagagagccaacataacc
ggtggcctgtacagttgtgacatcaccaccgaatccgatgactgtctccgaatcgatttt
gacaatgaagaggatgtgagagttgagaacaaggagaaccagtggatgggggtgacagtt
aacagccagggccccggagggaagattgtgacctgtgctcaccgctatcagagacgtctg
tttgtggacactgctcaggagtcccgtgacatcacaggtcgctgctacatcctgagtcag
gacctcactattgatgaatcctctgatgaagatggagggaactggaggttctgtgagggg
agagccagaggccatgagaggtttggctcctgtcagcagggtctggctgccactttcacc
aaggactaccattacgtggtgtttggagcgcctggcgcctacaactggaaaggcattgta
cgtgtagagcaaaagaacaacactttgttggaaaggggattttatgacgacggaccttat
gaagttggagatgagaaccgcttggatcctgacctggtgcctgtgcctgctaacagctac
ttagggttttccattgattctgggcatagcatcaccaaggggcgtggcctgaccattgtg
tctggggcaccgcgagccaatcactgtggggctgtggtcctgttgagaaaggagaatgaa
gcgtccgcaagactctccccggagtacattctagaagggcctggactggcatcttctttt
ggatatgatgtagctgtggtcgacctgaatggagatgggtggcaggatattgttgtggga
gcccctcagttcttcatgaaagagggagactttggaggagctgtttatgtctacatcaac
caggcaggaaagtgggacaagatcaccccaatccgcctcaatggaaccaaagactcaatg
tttgggctggcagtggaaaacatcggtgacatcaatcaggactcctatcaagacattgct
gttggagcgccctacgctgatgccggggcaggaaaagtgtacatttaccacggttctgct
attggaatcaacaccaagccggcacagatccttgagggaatgcccaacaacatcagatta
tttggatattctctggctgggaatatggatttagataagaattcctatcctgatatagct
attgggtctctctcagatacagttctcgtttacagggcaaggccaattattagcattcag
aaggatgtcaaaattactccaaaggaaattgacctcacaaagaaaacctgtggcaacagt
atctgcttgaccgtggaggcatgtttcacctataaagcaaaccctgtatcctacagccca
aaactaactatccgctacgcatttgagggtgaggcagatcgcaggaagcaagggcttccc
tccaggatcctcttcctcaacaagtctcacaccgaccaggacttccaatcgaccggaact
ctggacctccggggacaaaacaaaagagcttgcaccaagacaaaagtcaaactgcaggat
aacattagggacaagctgcgtggtattcccattgaggtgtcgttgggaatccagggtacc
aagcggcagaagaggcagaacgctctcccccagcttgtacctattcttgacaactcccag
ccaagcaaggtcgtcactgaggtgaacttcttaaaggagggatgcggaaacgataatatt
tgccagagtagcttacaactggagtacagattctgctccaaagagctcaaccaagatata
tttcccccattacctatggagaatgggctaccagtgatctccctcagtgatcagaaggac
atagctctggaggtgacagtgaagaacagaaatggggatgatgctcatgaggctaaactg
gtggggatgttccccaacgctctctcatactccggtttccgctctcagaaaatgacaagg
gataaaccggttctctgtttagccaaccagaatggctcccaaacagagtgtgaactgggg
aatccattcaaaagagattcagaggttactttctacataatcttgagcactgctggtatc
tctctcaatacggcagaaattaatattgacctcgagcttcaaacgaccagtacacaggac
aaaatgggaagagtgaaagcaaaggcgaaagtcgtgattgagctgttactttctgttgca
ggagttgcgagaccctcccaggtgtattttgggggtgatgtgaaaggagagagtgccatc
aacacagaagaggagatcggcggtttgattgattatgaatttaagataatcaatttgggt
aagccgttgaagtcctttggcacagcctcgttgaacatccagtggcccaaagagaatgtg
gatgggaaatggctgttatatctggttaagatcagcagtactggcctggaagagatcccc
tgctccccagagactgagatcaactctctcaaacacattcaggagtccagcacatctagg
aaaaagcgtgaagttggaggcaaaaaatctggaagcaaaattactttattggaccaaaaa
aagcacaagattttgatgtgtggcaatggctatgacgctagatgtgtggtgatcaagtgc
cctctacagggcttggacagtagtgcagtgattgcgctgcgatgccgtctgtggaacgct
accttccttgagaattatgccaatttgaactatcttgatataattgtgaaagcatccatc
agccttgatgctcctgcaaagaatatggttctcaggaatgctgagactcaggtgagagtc
acggtgtttccagagaaggcagtaacccagtatggtggagttccctggtggatcatcctc
gtggctgtcctggctggtattctgatgttggcattgctagtgtttctactctggaagtgt
ggatttttcaaacgttctgaacacgaggacagcgttccaatataccatgctgtacggata
aggaaagaggctcgtcagttcaaagacaggaaagccaagctgcattcctttgagaaaaag
cagtgggtgacaagctggaatgagaatgagaactactcataa

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