KEGG   Oncorhynchus mykiss (rainbow trout): 110501657
Entry
110501657         CDS       T07259                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03410  Base excision repair
omy04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110501657 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110501657 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110501657 (parp4)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110501657 (parp4)
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 VWA BRCT_2 VWA_2 BRCT PARP_reg PTCB-BRCT CobT_C
Other DBs
NCBI-GeneID: 110501657
NCBI-ProteinID: XP_036814895
Ensembl: ENSOMYG00000021735
LinkDB
Position
22:26936691..26967319
AA seq 2121 aa
MGSPSPWRSISMPCASSDPSARPQSNCVLNWSRFSSDLFQDTHESTKVMSTALYTQSVME
RAAMALFDNCFVVLELKNLPYKEKNRLKLAITENGGSISYVINKQCTLVVTSSMSSLSSS
RVRSMKKHQTPVVGVEYVSLCLEKGVLLPVEDYCLPPPPSTSLIPPRPASPLPSQSVLKG
TSQPAEVQTQTVNAVNQAERAGNRESTYLGKFRVYTESDNDLPTYPTHFQVAKYSIFGKC
VYLCVFQANSSTWSVLELQSGSAEGGQQQYRVVRYWREDHGAKSAAVQDKQVFLSMSEEA
VEVYQTLRKELQVRGLTLRTTLPPEAPDLGSASLQQLLLEEKLSCSSLSQEVGVFVELLW
AEALGCLDNVLKVPITSLSLNDVSRAEGLLLQVQRKLRARQGEGPDTEVASLMEEVYTLL
PHKTDLSHLPLHTKLISSQLDLCQLIRDVLNVSEATLRSPIPSCLGKYRALRCSIERVPP
GPEFLYVTELLQDRQVQILQVLRVNRGVELQMFREELGNVKPLLHSSSPSSFVGILSRGL
LLPRVGVEHHGIERTDIGNLGGGIYFSDAISTSLKYSKPSVTDGSRLLLVCDVALGRCTD
LQKRDSSLTHSPEGYHSVHGVRHTPKKPSEFDDDEYVVYSPEQVRLQYVVQFRLEEDRLK
DFQPTIDTSSTELPLPVSPSDLLSCGEAEEDVGSCKNPLEEVTAGLLDCSGQPLPLQAVH
VRARLMDLLSQVIIFQTYTNQSTAPIEAKYVFPLDDSAAVCGFEAFINGKHVMGQVKEKQ
QARKEYKQAIERGHGAYLMDQDAPDVFTISVGNLPAGATVLIKVTFVTELVVMEGLINFS
LPGSVAPWQQSSALNQRTQVTLEKVCVTNLDSQGEFSLDMSIEMPNEIINLHCLTHKVKI
KRTDCKAVVRTCPGETLGPDGFLVCFSLAQIHLPRMWVEKHPDKDSQACMLVFYPDFEPC
PTSSPMSGSSEVILLLDSSESMRGEALQNARRIALQLLNTLDHHSIRVNVISFGSDQKDA
FLSANPLVEALQPAKEFIMSSSPVGGSTELWRPLRSLSLLPPSHGMRNLLLLSDGHVQNQ
ALTLQLVRQHAQHSRLFTCGLSPTANRHMLRALAQAGGGAYEFFDTKTKHTWREKVACQV
KRIVSPGCSSVSVKWQQFNPSAPPPVQAPSQLHALFTDCHTLVYGFVPHCTQATLLGDLS
GQNIETMVSTTELQKTRGTFLHKLTARAVIRDYEDGSLHTNEAEHEGKKSVMKSFIIELS
KEFSILSQFTSFVAIEERDSEQPDAGFTDVPKLISDEDVDFLPYLSWQQEEYEGDGMDSG
SDSMSNLLNGGLGHVLCRKICLKERGMGEEHELMGQLQVDDESWEGSVNLRSKCLNQRAT
DEVPLGRILNSSYFMGHMVSASPVTLSAATEPLDMTLKSEGAVTDEEMEYFDDLDFELRE
FMHSEALSSSSSPTLHTLSGSQCIPRTPYLTTTMLPMAMETDFIPELCGTFYSLPKIVRL
AKSREGDFRRADRHRKVCAGSAFDPVETQKKSLSVADVPRPPPSVHHLQIKSCVVADAFP
PPPPASALSSPGPPPSRLQSFPATVSDALPPPPPAPVLYSPCPPPFRSQSFSAAVSDSLP
PPPPPASVLSSPGPPPFRLRSFPATVSDALPPPPPAPVLSSPGPPPFRLQSFFAGGSGSL
PPPSALVSNEFRAIRYEMGVHARPGVGAISHTATFPELQAGGDLLLSKPQEAYPVEQSSM
CETSKMWTLDNSLSEDKDCGLVEMDHWQPSVVPASAPPSGFGFGGGRAGSQSRQPHGSLF
GATASACYIPDLYEASSAGGPPLGGSARSMGLSFEAPLTGGHLSSLSPTTHGAYMTPSLV
PLVGSSQFNSSLSTLQQHNVLPQAQKPLDMKKNVQKLVGDSERYVSASVRPSLCLSVYDL
YWRHVLLCVALWYPNEVGFDFRRGGLEFRKRGLEFRKNTLDVVKWTEIFALQHSEGYWEC
SASLGYLLGVDVDYFANVFLKNRGISSLGVRAHADILRLVASLLVLQLMRVRRLDEGKLL
LSLFRLDLDHSPPQPRCERWEAVRRAVDWVCWADKEYPCVCSRLEFGWDWESSTRQLLGI
DPPHPLSPLILLGTTGGVRAQ
NT seq 6366 nt   +upstreamnt  +downstreamnt
atgggatctccctctccctggaggagcatctcaatgccctgtgcctcctccgatccctcg
gcccgaccccaaagcaactgtgtactcaactggagcagattctcctccgatcttttccag
gacacccacgagagcaccaaagtgatgtcaaccgccctctacacccagtctgtcatggaa
agagcagctatggctctgtttgacaactgttttgtggttttggagctgaagaatttgcct
tataaggagaagaataggctgaagctggcaataacagagaatgggggcagcatttcctat
gtgatcaataagcagtgtactctcgtagtgacgagcagtatgtccagtctgagctccagt
cgggtgcggagcatgaagaagcatcagactccagtagtaggggtggagtatgtgtcactc
tgcctggagaagggagtcctgctgcctgtagaggactactgcctgcccccccctccctct
acctctctcatcccacccaggcctgcctctcccttgccatctcagtcagtgttgaaggga
acgagccagccggctgaagttcagacccagacagtgaatgctgtaaatcaagccgagagg
gcggggaatcgggagagtacttacctgggcaaattcagagtgtatactgaaagtgacaat
gatctaccaacatatccaacacatttccaagtggccaagtactccatttttggaaagtgt
gtgtacctatgtgttttccaggctaatagcagcacatggtcggtgttggagctgcagagt
ggcagcgcagaggggggacagcagcagtaccgtgtggtgaggtactggagagaggaccat
ggtgctaagtcagcagctgtgcaggacaagcaggtgttcctctccatgtcagaggaggct
gtggaggtctaccagactctcaggaaggagctgcaggtcagaggactcacactgaggacc
accctccctccagaggctccggatctgggctctgccagcctgcagcagctgctgctggag
gagaagctgagttgcagcagcctatcacaggaagtgggcgtgttcgtggagctgctctgg
gcagaggcccttggttgtctggacaacgtcctcaaggttccaatcaccagcctcagtctc
aacgatgtgagcagggctgaggggctgctgctacaggtccagaggaagctgagggcgaga
cagggggaggggccagacactgaggtggcttctctaatggaggaggtctacaccctcctg
ccacacaaaactgatctgtcccatctccctctccacactaaactcatctcatcgcaactg
gacctctgccagttgatcagagacgtgctgaatgtgagcgaggcaacactgagaagcccc
atcccttcttgtctggggaagtaccgcgccctgaggtgtagcattgaaagagttccccct
ggtcctgaatttctgtatgtcaccgaacttctacaggacagacaggtgcagatcttgcag
gtgctgagagtaaacagaggggtagagctacagatgtttagggaggagctggggaacgtt
aagcccctcctccactcctccagccccagcagctttgtggggatcctgtctcggggtctg
ttgctgcccagagttggagtggagcatcatgggattgagagaacagacattgggaacttg
ggcggtggcatctacttcagtgatgcaatcagtaccagtttgaagtactctaagcccagt
gtgacggacggcagtcggctgctgctggtgtgtgacgtggcgttggggcgctgtactgac
ctccagaagagggacagcagcctgactcactcccctgagggataccacagtgtacacggg
gttcgccacacccccaagaaaccctcagagtttgacgatgatgagtatgtggtgtacagc
ccggagcaggtgaggctgcaatatgtggtacagttcagactggaggaggaccggctgaag
gacttccagcccaccatagatacttcttctaccgagcttccgcttcctgtctctccgtct
gacctcttgtcctgtggtgaggctgaggaggatgttgggagctgtaagaaccctctagag
gaggtgactgcaggcctgttggactgctctggacaaccactccccctacaggccgttcat
gtcagggccaggctgatggatctgctctcccaggtcatcatcttccagacatacaccaat
cagagcaccgcccccatcgaagccaagtacgtcttcccattggatgattctgctgctgtg
tgtggttttgaggccttcatcaatgggaaacatgtaatgggacaggtgaaggagaagcag
caggcgcgtaaagagtataaacaggccatagagagaggccatggagcttacctaatggac
caggatgcacctgatgttttcaccatcagcgttgggaacctgcctgccggtgccaccgtc
cttatcaaagttacctttgtcaccgagctggtcgtcatggagggcttgatcaacttctca
ttgcccggtagtgtggcgccatggcaacagagctcagcgctcaaccagaggactcaggtg
actttggaaaaggtgtgtgtgaccaacctggattcccaaggggagttcagtctggatatg
tccattgagatgcccaacgagattatcaacctgcactgtctcacacacaaagtcaagatc
aagaggaccgactgtaaggcggtggtgaggacatgtccaggtgagactctgggtccagat
gggttcctggtctgcttcagtctggctcagatccacctacccaggatgtgggtggagaaa
cacccagataaagacagccaggcctgtatgctggtattttacccagactttgagccctgc
cccacctccagccccatgtccggctccagtgaggtgatcctgctgttggactcgtctgag
tccatgagaggagaagctctccagaacgccaggagaatcgccctgcagcttctgaatacc
ctggaccaccacagcattcgagtcaatgtcatctcctttggctcagaccagaaggatgct
tttctctctgccaaccctctagtcgaggccctccaaccagccaaggagttcatcatgtcc
tcctcacctgttgggggcagcactgagctgtggaggcccctgcgcagcctgagtctgttg
cctccgtcgcatggcatgaggaacctgctgctgctatcagacggtcacgtccagaaccaa
gccctgaccctgcagctggtcagacagcatgcccagcacagccgcctcttcacctgcggc
ctcagcccaacagctaatcggcacatgttgcgggccctggcccaggcagggggaggggcc
tatgagttctttgacacaaagacaaagcacacctggcgagagaaggtggcgtgccaggtg
aagcgcatcgtgtctccaggctgcagctctgtgtctgtgaagtggcagcagtttaacccc
tcagctcccccccctgttcaggcgccctctcagctccacgcactcttcactgactgccac
accctggtctacggcttcgtgccacactgtacacaggccactcttcttggagacctgagt
ggtcagaacattgagacaatggtgtccaccactgagctacagaaaaccaggggcacgttc
cttcataagctcacagcgagggccgttatcagagactatgaggatggcagtcttcacacc
aacgaggctgaacatgaggggaagaaatcagtgatgaagtccttcatcattgagctgagc
aaagagttctccatcctgtctcagttcaccagctttgttgccatcgaggagagggactca
gagcagcctgacgcgggcttcacagatgttcccaaactgatctcagacgaggacgtcgac
ttcttaccttaccttagctggcagcaggaggaatatgagggagatgggatggactctgga
tcagactcaatgtcaaacttgctgaatggtgggctagggcatgttttatgcagaaaaata
tgtctaaaggagagggggatgggggaggagcatgaattgatgggtcaactccaggtggat
gacgaatcatgggaaggatctgtgaacttacgttccaaatgtctcaatcagagggctacg
gatgaggtgcctcttggtaggatacttaattcctcttacttcatgggccatatggtctca
gccagcccagtgaccttgtccgctgctaccgaacctttagatatgactttgaagagtgaa
ggagctgtgacggatgaagagatggagtactttgatgacctggactttgaattacgggaa
ttcatgcatagtgaggctctgtcctcttcttcctctccaactctccacacgctttcaggc
agccaatgcataccacgcaccccgtaccttactaccactatgctgcctatggctatggag
acggatttcatccctgagctgtgtgggaccttctactctctcccaaagatagtgaggctt
gcgaagagtagagagggagactttagacgggcggacagacacaggaaggtttgtgccggt
tcggcatttgaccctgtagagacacagaagaagtctctctctgttgctgatgtgcctcgt
cctcctccctctgttcatcatcttcagatcaagtcttgcgttgttgctgatgcttttcct
cctccaccccctgcttctgccctcagttctcctggtcctcctccatctcgactgcagtct
ttccctgccacagtttcagatgctcttcctcctccaccccctgctcctgtcctctattct
ccttgtcctcctccatttcgatctcagtctttctctgccgcagtttcagattctcttcct
cctcctccaccccctgcttctgtcctcagttctcctggtcctcctccatttcgactgcgg
tctttccctgccacagtttcagatgctcttcctcctccaccccctgctcctgtcctcagt
tctcctggtccacctccatttcgactgcagtctttctttgccggaggttcaggttctctt
cctcctccctctgctcttgtctccaatgagtttcgagcgattagatacgagatgggagtt
catgccagacctggagttggggctatctcccatactgcaaccttcccggaactgcaagcc
ggtggggacctgctactttccaaaccccaagaggcctatcctgtggaacagtcgtcaatg
tgtgagactagcaaaatgtggaccttggataatagcttatctgaggataaggattgtgga
ctagtggaaatggaccactggcaaccttctgttgtccctgcttctgcgcccccatcaggg
tttggtttcggtggcggaagggcaggttctcaaagcagacaacctcacggctctttgttt
ggggccacagccagtgcatgttacattccagatttatatgaggcttcttcagcaggcgga
ccacctcttggaggctcagccagatcaatggggttaagttttgaggcaccacttactggc
ggacacctcagctccctttcacctaccactcatggcgcctatatgaccccatctttagtg
cccttagttggatcctctcagtttaatagctctctcagtacactacaacaacataatgta
ctaccacaagcacaaaaacctctggatatgaaaaaaaacgtacaaaaacttgtcggagac
agtgaaaggtatgtgtcagcgtccgttcgtccgtcactttgtctgtctgtgtatgacctc
tattggagacatgtattgttatgtgtagctctgtggtatcctaatgaggtaggttttgat
ttcaggaggggaggtcttgaattcaggaagagaggtcttgaattcaggaagaatactctt
gatgtagtaaaatggacagagatttttgccctccagcactcggaaggttactgggagtgc
tctgccagcctgggctacctcctcggtgtggatgtggactactttgcaaatgtcttcctg
aagaatagaggcatcagctctctaggtgtgagggcccatgctgacatcctgaggctggtg
gccagtctgctggtgctgcagctgatgagggtgaggaggctagatgaggggaagctgctg
ctcagcctgttccgtctggacctggaccactctcctcctcagcccaggtgtgagcgctgg
gaggcggtgaggagggcggtggactgggtgtgttgggcagacaaggagtacccgtgtgtg
tgcagcaggctggagtttggctgggactgggagtcgtccacacggcagctcctgggcatc
gaccccccgcaccccctctctcccctcatcctcctcgggaccacagggggagtgagggcc
caatga

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