Oncorhynchus mykiss (rainbow trout): 110501718
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Entry
110501718 CDS
T07259
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X2
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110501718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
omy04050
]
110501718
Cytokine receptors [BR:
omy04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
110501718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
SCIMP
Motif
Other DBs
NCBI-GeneID:
110501718
NCBI-ProteinID:
XP_021435136
Ensembl:
ENSOMYG00000033147
UniProt:
A0A8C7SYP5
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Position
22:complement(29940139..29995646)
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AA seq
485 aa
AA seq
DB search
MLQKGSQKESLFLCLLLVSCPPFLRSEYSSCGEFEFYNQTLSSCQPCPPCQPGQEPHMNC
GYGIKDEDFVCVSCPPGKYSKGKYEICRRHKDCEGLYRATVLKPGTPDNDADCGPCLPGY
YIQENRPRNLYGMVCHSCQNAPRNTKECMLTKVVLSGKAPSVSTSSTTMFPHPHKDPTGQ
GHLATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKD
VPDNVVIFSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPN
PSLCLLNLGTKPDLCLLSLGLLNKDKTGSNPTSPINANNISNSNANIINNNNKATGIQSR
RKKILDLYARACNVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGLKR
DEIGGMSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLSSP
RCASV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttacagaaaggaagtcagaaagagtctctcttcctctgtttgttattggtgtcctgt
cctccttttctcaggtcagagtacagtagttgtggagagtttgagttctacaaccagacc
ctcagtagctgccagccctgcccaccatgccaacctggacaggagccccacatgaactgt
ggctatgggattaaggatgaggactttgtgtgtgtgtcgtgtccgccggggaagtactcg
aagggaaagtatgagatctgcaggagacataaggactgtgaaggtctgtaccgtgctaca
gtactcaaacctgggacaccagacaatgatgcagactgtggaccctgcttacctgggtat
tacatccaggagaaccggcccaggaacctgtatgggatggtctgtcactcgtgtcaaaat
gcaccgcgcaacactaaagagtgcatgcttaccaaagttgtgctgtcaggcaaagccccc
agtgtctcaaccagcagtaccaccatgttccctcaccctcacaaagaccccacaggacag
ggtcacctagcaactgctctcatcatcgccatgtcaaccatcttcatcatggccatcgcc
attgtcctcatcatcatgttctacatcctcaaagccaagcccagcggacaggcatgctgc
tctggtcaggtggtgaaggctgtggaggctcagaccaacaaacaggaggataagaaagat
gttccagacaatgttgtaattttctccgaaaaggatgaatttgacaaactcaaacctacg
cctccgaagacggtgaaaagtgagaatgatgcatcgtcagagaacgagcagctgttgagt
cgtagtatggatagtgatgaggaggcagcattggagaggcagggggcagccgatcctaac
cccagcctctgtctcctgaacctgggaaccaagccggacctctgcctgctttccctgggg
ctcctcaacaaggataagactggatccaaccccaccagccctatcaacgctaacaacatt
agcaatagcaatgcaaacatcatcaataacaacaacaaggctacagggattcagagccgg
aggaaaaagatcctcgatctgtatgctagagcctgcaatgtggccgagggtctaagtcct
acagaactaccatttgactgtctggagaaggccagtcggatgctgagctcctcctacagt
agtgaggcagccgtggtgaagacctggagacacctggcagagagttttggcctgaagagg
gatgagatcggagggatgagtgacggcctgcagctgtttgagaggatcagtacagccgga
tacagcatcccagacctgctaaccagactggtgcagatagagagactggatgctgtggag
tcactatgttctgatgtactgggaggaggagatacacacactgtccctctgtcctcacca
cggtgtgcaagcgtctga
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