Oncorhynchus mykiss (rainbow trout): 110501847
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Entry
110501847 CDS
T07259
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04144
Endocytosis
omy04145
Phagosome
omy04148
Efferocytosis
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110501847
04145 Phagosome
110501847
04137 Mitophagy - animal
110501847
04148 Efferocytosis
110501847
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110501847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110501847
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110501847
04031 GTP-binding proteins [BR:
omy04031
]
110501847
Membrane trafficking [BR:
omy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
110501847
Endosome - Lysosome transport
110501847
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110501847
Exosomal proteins of other body fluids (saliva and urine)
110501847
Exosomal proteins of colorectal cancer cells
110501847
Exosomal proteins of melanoma cells
110501847
GTP-binding proteins [BR:
omy04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
110501847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
110501847
NCBI-ProteinID:
XP_021435369
Ensembl:
ENSOMYG00000019771
LinkDB
All DBs
Position
22:38476244..38485443
Genome browser
AA seq
220 aa
AA seq
DB search
MATRGSGRPNCMLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNDLFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAHNTRSCCGGGGGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagagggagtggccggcccaattgcatgctgccccagacaaagatatgccag
tttaaactggtgttgctgggagacatggctgtgggcaagtccagcctggtgctgcgcttc
gtcaagggacagtttgatgagttccaggagaccaccattggagctgcattcctggcccag
tctgtgtgtctagacgacaccactgtgaagtttgagatctgggacacggcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggctgctattgtggtcttt
gacatcaccaagccggagacgtttgagcgagccaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctttggcagggaacaaggctgacctggctgagaag
agactagtggagtacgaggaggcccagacctattctgaagacactgggcttctcttcatg
gagacctctgccaagacggccatgaatgtcaacgatctgttcctggccattgccaaaaag
atgccaaaaacagacacccagaaccctacacacgcagcacgacacagaggagtgaaccta
caggaccctgatgcccacaacacccgatcctgctgtggaggaggaggaggaggtgggaac
tag
DBGET
integrated database retrieval system