KEGG   Oncorhynchus mykiss (rainbow trout): 110501847
Entry
110501847         CDS       T07259                                 
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137  Mitophagy - animal
omy04144  Endocytosis
omy04145  Phagosome
omy04148  Efferocytosis
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110501847
   04145 Phagosome
    110501847
   04137 Mitophagy - animal
    110501847
   04148 Efferocytosis
    110501847
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110501847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110501847
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110501847
   04031 GTP-binding proteins [BR:omy04031]
    110501847
Membrane trafficking [BR:omy04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    110501847
 Endosome - Lysosome transport
    110501847
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110501847
  Exosomal proteins of other body fluids (saliva and urine)
   110501847
  Exosomal proteins of colorectal cancer cells
   110501847
  Exosomal proteins of melanoma cells
   110501847
GTP-binding proteins [BR:omy04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    110501847
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 110501847
NCBI-ProteinID: XP_021435369
Ensembl: ENSOMYG00000019771
LinkDB
Position
22:38476244..38485443
AA seq 220 aa
MATRGSGRPNCMLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNDLFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAHNTRSCCGGGGGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggctaccagagggagtggccggcccaattgcatgctgccccagacaaagatatgccag
tttaaactggtgttgctgggagacatggctgtgggcaagtccagcctggtgctgcgcttc
gtcaagggacagtttgatgagttccaggagaccaccattggagctgcattcctggcccag
tctgtgtgtctagacgacaccactgtgaagtttgagatctgggacacggcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggctgctattgtggtcttt
gacatcaccaagccggagacgtttgagcgagccaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctttggcagggaacaaggctgacctggctgagaag
agactagtggagtacgaggaggcccagacctattctgaagacactgggcttctcttcatg
gagacctctgccaagacggccatgaatgtcaacgatctgttcctggccattgccaaaaag
atgccaaaaacagacacccagaaccctacacacgcagcacgacacagaggagtgaaccta
caggaccctgatgcccacaacacccgatcctgctgtggaggaggaggaggaggtgggaac
tag

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