KEGG   Oncorhynchus mykiss (rainbow trout): 110501961
Entry
110501961         CDS       T07259                                 
Name
(RefSeq) tubulin alpha chain isoform X1
  KO
K07374  tubulin alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04210  Apoptosis
omy04530  Tight junction
omy04540  Gap junction
omy04814  Motor proteins
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110501961
  09143 Cell growth and death
   04210 Apoptosis
    110501961
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110501961
   04540 Gap junction
    110501961
  09142 Cell motility
   04814 Motor proteins
    110501961
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110501961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110501961
   03036 Chromosome and associated proteins [BR:omy03036]
    110501961
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110501961
   04147 Exosome [BR:omy04147]
    110501961
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110501961
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110501961
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110501961
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110501961
  Exosomal proteins of other body fluids (saliva and urine)
   110501961
  Exosomal proteins of colorectal cancer cells
   110501961
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 110501961
NCBI-ProteinID: XP_021435514
LinkDB
Position
22:complement(47628880..47635640)
AA seq 449 aa
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKPTGNLDDSFTTFFSATGTGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEGEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctgttcacgtgggccaggccggagtccagatgggcaacacctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
cccacaggtaacctcgacgactccttcaccaccttcttcagcgccacgggcaccgggaag
tacgtgccacgcgccatcttcgtcgacctggagcccaccgttatcgatgaggtgaggaca
ggcacctatcgccagctgttccaccctgagcagctcatctcaggcaaggaggatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgactccgtcctggat
aggatccgtaaactggctgaccagtgtactggtctccaaggtttcctggttttccacagc
ttcggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtcgac
tttggcaagaagtctaagctggagtttgccatctatccagctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccactcacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgtaggaaccttgacattgag
cgtccctcgtacaccaacctcaacaggctgatcagtcagatcgtctcctccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccggtcatctccgctgagaag
gcctatcacgagcagctgtcagtggctgagatcaccaatgcctgctttgagccggccaat
cagatggtgaaatgtgacccccgtcatggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaggatgtcaatgtggcgatcgctgccatcaaaaccaagaggagt
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggtggttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgccgaggcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagagccttcgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggattatgaagaggtgggcatcgactcgttt
gaggagggggaagaaggagaagagtattaa

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