Oncorhynchus mykiss (rainbow trout): 110501992
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Entry
110501992 CDS
T07259
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110501992 (smarcal1)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110501992 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Flavi_DEAD
DEAD
Motif
Other DBs
NCBI-GeneID:
110501992
NCBI-ProteinID:
XP_036815422
Ensembl:
ENSOMYG00000037908
LinkDB
All DBs
Position
22:complement(52087979..52110797)
Genome browser
AA seq
978 aa
AA seq
DB search
MSSSLTAEQLQKIEENRRRALAIRAQRQAAQCNNQTPISGLNNPASAPQQCINTHSGPPS
NSTPRPGLTHHPPNTVLQNYVPRGQDRRPDQLFSSPRDKSGQNSLFTNTATKQIKVIDPL
PLPKGQHSLKGLDVSTGGSPSVFKALQPKTTGGPSSSFSGSSTGTGSSYGAKSSSSGQNV
SSVFKPPQPNKAVLPGPYPTSTSATGSFSVSKPHPKTSSSGLSSHSGCAIGSFYKQGSKH
GATSPSVQSAAPSSGTDVSNSLPGKSPAVTVRGKCVSHSEERFRVEVGYHAELIAVFKNI
PSRNYDPATKMWNFSLEDYRQLMEESGSISCICLKPLVRGIDVAPASSRSRDTAALGALL
KLCSGWQRPGATVQGHATLVSRSRFEVDVGYHVDVIAAFKQMPSKNYDMKTRKWSFLLED
YKRLMDALGAIPSVEIEPLPRGVIQVFSALFEGSQTWPSEVPEADLSSIDPSLTRRLMPF
QRDGVNFAVSKDGRLLLADDMGLGKTVQAICIAAYYRKEWPLLVVAPSSVKFTWAEAFRQ
WLPSVQPDSINVIVKGKDNLRGGLVNIISYDLLSRMDKQQAANPFNVLIMDESHFLKNMK
TARFKAALPLLKVAKRVILLSGTPAMSRPSELYSQILAVKPSLFPHFRDFGTRYCNARQL
PWGWDYSGSSNLGELKLMLEESLMLRRLKSEVLSQLPAKQRKVVTVTTDGINTRTKAALS
AAAKDLAKGQHNNNKIKEALLVFFNHTAEAKIKAIMEYIMDMLECGREKFLVFAHHKLVL
DFITKELGEKGIDYIRIDGSTPSSERQQLCDRFQFTDKSCVAVLSITAANMGITLHSAAL
VVFAELFWNPGILIQAEDRVHRIGQTSNVDIHYLVAKGTADDYLWPMIQEKMHVLEKVGL
SESNLSEKAESASFHSKDSQQRRITEMFQKSFTEGEDDMDEALLLEAVGAWDDPSNQPGS
GVEESPSKKRRIEDYFGR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctctttgacggcagagcagctgcagaagatagaggagaacagacggagagct
ttagcgattagagcacagagacaggctgctcagtgtaacaaccagacgcccatatcaggg
ctcaacaaccctgccagtgctcctcagcaatgcattaacactcactctggtccaccttct
aactcaactccccgaccaggactaactcatcatccacctaatactgtgcttcagaattat
gttccacggggtcaagacaggagacctgaccagttgttttctagcccaagggacaagtct
ggacagaattcactattcaccaatactgccactaaacagattaaagtaatagacccacta
cctctcccaaagggacaacattcattgaaagggttagatgtgtctacaggaggaagcccc
tcagtgttcaaagcacttcagccaaagacaacaggtggcccatcatcttccttttctgga
agttccactggtactggtagttcatatggagccaagtcatcatcatcaggccagaacgtc
tcctctgtgttcaaacctccacagccgaataaagcagtgttacctggtccgtatcctact
tctacaagtgcaactggcagtttctctgtttctaaacctcatccaaagacctcttcttct
gggctgtcttcccattctggatgtgccattggtagtttctataaacaaggaagcaaacat
ggagccacatcaccatctgtccagagtgctgctccctccagcggtactgatgttagtaac
tctctacctgggaagagccctgccgtcacagtcagagggaaatgtgtctctcactcagag
gagcggttcagagtggaagtcggttaccatgctgagctgattgctgtgttcaaaaacatc
ccttctcggaactatgaccctgctaccaagatgtggaacttcagccttgaggactatcgt
cagctgatggaggagtccggctccatctcctgtatatgtctgaaacctctggtgaggggt
attgacgtggcgccggcgtctagccggtcccgtgacactgctgcgcttggggccctgctg
aagctgtgtagtggctggcagagaccaggggccaccgtacagggccacgccaccctggtg
tcacgatcacgcttcgaggtcgacgttgggtaccatgttgacgtcatcgctgctttcaaa
cagatgccttccaagaactatgatatgaagacaagaaagtggagtttcttgcttgaggat
tataaaagacttatggatgctctcggtgccattccatcagtagagattgagcctctccct
aggggtgtgatccaggtgttctctgccctgtttgaaggcagccagacatggccatcagag
gttcctgaagctgacctgtcttccattgacccctcattgacacgtcgtctcatgcccttc
cagagagacggtgtcaactttgcggtgtccaaagatggccgcctcctcctggctgatgac
atgggactggggaagacagttcaggccatttgcatagctgcctactacaggaaagagtgg
cctttattagtggtggccccttcttctgtcaaattcacctgggctgaggccttcaggcag
tggctgccctccgtgcagcctgacagtatcaatgtgattgtcaaggggaaagacaacctg
aggggtggtctggtcaacatcatcagctatgatctactgagcaggatggacaagcagcag
gctgctaaccccttcaatgttctcataatggatgagtcccactttctgaagaacatgaag
actgcccgctttaaggctgccttgccactgctcaaggtagctaagcgtgtgatcctgctg
tcggggactcctgccatgtccagaccctcagagctctacagtcagatcctggctgtcaag
ccctccctgttcccccacttccgtgactttgggaccaggtattgcaatgcccgacagctg
ccgtggggttgggactactctggctccagtaatctaggagaactgaagctgatgttagag
gagagtctaatgctacgccgtctcaagtcagaggtcctctctcagcttcctgccaagcaa
cgcaaggttgtcacggtgaccacagacggtatcaacacccgcaccaaggcagctctgtct
gccgcagccaaggatctggccaagggacaacacaacaacaacaagataaaggaggctctt
ctggtgttctttaaccacactgctgaggccaagattaaagccatcatggagtacatcatg
gacatgctagagtgcggaagagagaagttcctggtgtttgctcatcacaagctggtcctg
gactttatcaccaaggagttgggagagaagggtatcgactacatccgtatagacggctcc
accccgtcgtcagagcggcagcaactgtgtgaccggttccagttcactgacaagagctgt
gtagcggtgctctctatcactgcagctaacatgggcatcaccctgcactctgctgctttg
gtggtgtttgctgagctattctggaaccctgggatattgatccaggctgaggacagagtg
catcgtatcggtcagaccagcaacgtggacattcactacctggtcgccaagggaaccgca
gatgactacctgtggcccatgatccaggagaagatgcatgttctggagaaggtggggcta
tcagaatccaacctgtcagagaaggcagagtctgccagcttccactccaaggactcccag
cagaggaggatcacagagatgttccagaagtcgttcactgagggggaggatgatatggat
gaagccctcctattggaggctgtgggggcctgggatgaccctagcaaccaaccaggaagt
ggtgtagaagagagccccagcaaaaagagacgcatagaggactactttggcagataa
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integrated database retrieval system
