KEGG   Oncorhynchus mykiss (rainbow trout): 110502024
Entry
110502024         CDS       T07259                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110502024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110502024
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110502024
 Complex B
    110502024
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 110502024
NCBI-ProteinID: XP_036815465
Ensembl: ENSOMYG00000014042
UniProt: A0A060X0I6
LinkDB
Position
22:complement(23776064..23788613)
AA seq 239 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRGGGHHSRSRSRERRSRSRDRGRGGGGGGGGRDRERRRSRDRERSGRF
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcggaatacctggcgtccattttcggtacagagaaagataaggtgaactgttctttc
tactttaaaattggtgcctgccgccatggtgaccgatgctccagattacataataagcca
actttcagccagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtttgcgctgtgccgtcagtgacgtggagatgcaggagcactatgacgag
ttctttgaggaggtcttcacagagatggaggagaagtatggagaggtggaggagatgaac
gtgtgcgataacctgggagaccatctggttggaaacgtatatgtgaagttccgtcgtgaa
gaagacgcggagaaggcagtgatggatctgaataaccgctggttcaacggtcagcccatc
cacgccgagctctctcccgttaccgacttcagagaagcctgctgtcgccagtacgagatg
ggggagtgcactcgaggaggcttctgtaacttcatgcacctgaagcccatctctagggag
ctgaggagggagctatacggacgccgcaggaagaggggaggggggcatcattctcgctcc
cgttccagggaacgtcgttcgcgctcaagggacaggggaaggggaggtggaggtggtgga
ggtggacgtgaccgcgagagaaggcgctccagagaccgagaacgctctggaagattctaa

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