Oncorhynchus mykiss (rainbow trout): 110502046
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Entry
110502046 CDS
T07259
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110502046 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110502046 (usp9)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110502046 (usp9)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110502046 (usp9)
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110502046 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
RasGEF_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
110502046
NCBI-ProteinID:
XP_036814554
Ensembl:
ENSOMYG00000030017
LinkDB
All DBs
Position
22:9210510..9288763
Genome browser
AA seq
2652 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAQSQSQPPLPQNQTASPNSTNENSPVSPPDEQGQGDGP
PQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKGWLVDLINKCGSLNGFQTL
HDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINIQT
NLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVR
AGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYAA
IINIITSKGYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCRE
GKLVAKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEI
HEDFIQSCFDRLKASYDTLRVLDGDKDSINSARQEAIRMVRVLTVLKEYINECDSDYHEE
RTILPMSRAFRGKHITLTVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTK
IELFIGGDVVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHG
NHFSDGPNPEVESCLPGVIMSLHLRYISFLWQVADLGCGINMPLLRDGARVLMKLMPPDN
STVEILRAMCLDHAKLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDAS
DFQYNFLKSGGLPLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVA
EACQPNAEGTIPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFF
QASKYIPDICVIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCE
ALEIMTLCFSLLPTALDTLSKEKAWQTFIIDLLMHCHSKSVRQMAQEQFFLMATRCCMGH
RPLLFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWL
KRIRDEVKRTGETGVEETILEGHIGITKELLAFQTSEKKYYIGCEKGGANLIKELIDDFI
FPASNVYLQYMKSGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQMVDTLTDMY
YLGCEALTEWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTG
TDVDDDMSGDEKQENESNVDPRDEVFNYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFG
HLASSRLQYYIPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSK
VLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCE
KCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGV
AKLEGDDVNPENQVIQQNEPSEPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGA
DGERNRWYKFDDGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYI
LFYERMDSLDKDSELVKYIQELTISSSSNNKPPHQVKMPGVIECSVRKQNVQFMHNRMQY
SLEYFQFVKKLLTCNSVYLNPPPGQDHLLPEAEEMAMISVQLAAKFLFSTGFHTKKVVRG
PASDWYDALCVLLRHSKNVRYWFAHNFLFAYTNRFSEYLLECPSAEVRGAFAKLIVFIAH
FSLQDGPCPSPTASPVGASTQPQACDNLSLSDHLLRTVLNLLRREVSEHGRHLQQYFNLF
VMYANLGLAEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVA
ARMQSSINGNPPLPNPYGDANQTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNSEETVKL
LRFSCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGI
PDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWL
GDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTK
HGEAVSEEDAAMRKTSSPQQLLPGEGTGQQHTEPDDQEAPEDQDTSPPDDISLYPHSSPG
TTTQFQQQNNHPHGQPYTGPAAQHMNNPQRPGPVPSSAPGPAPGTGPQAQDNWESTEEVP
STTSLAPAPPKE
NT seq
7959 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctcctgttgggggaaacgacaaccaggcaggccaggcg
cccgacgctcagagccagagccagcctccgctgccacagaaccagacggcgtcccctaac
tccaccaatgagaactctccagtgagccccccggatgaacagggtcagggggatggcccc
ccccagctggaggaggaggagcctgccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccgctgggttgttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaagtgtgaggcgtgccag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggccgtc
agcgggtggaagtttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctttctcaggactggttccccttgctggagctgctggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gccggggtgcagctggccgatgacgagctcttcgctcgcccccctgaccctcgctccccc
aagggctggttggtggatttaataaacaaatgtggctcattaaatgggtttcaaacactg
cacgatcgcttcataggtggccaagcactgaacgtccagatcatcgccgcacttatcaag
ccttttgggcagtgttacgagttcctcacattgcacacggtgaagaagtacttcctgccc
gtcatcgagatggttcctcagtttctggagaacttgacagatgaggagctgaagaaggag
gccaagaacgaagccaaaaatgacgccctgtccatgatcatcaagtccctgaagaacctg
gcctccagggtgcctgggcaggaagagaccgtgaagagtttagagatttttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaa
gtaaacaaggtaatctcaagtgtgtcctactacacacatcgacatggcaaccctgaggag
gaggagtggcttactgcagagcgcatggcggagtggatccagcagaaccacatcctgtcc
attgttctgagggacagtctgcaccagcctcagtacgtagaaaaactagagaagatactt
cgctttgtcatcaaagagaaagctcttactatgcaggacctggacaacatctgggctgca
caggctggtaaacatgaggccatcgtgaagaacgtccacgacctcctggccaagctggcc
tgggacttctcccctgagcagctcgaccacctttttgactgcttcaaggcgagttggacg
aacgctagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcggaggat
gacaaggatggggtgatggcccacaaggtgctgaacctgttgtggaacctggctcacagc
gatgacgtgcctgtagacatcatggaccaggccctcagtgctcacatcaagatactggac
tacagttgctctcaggatcgagacacgcagaagatccagtggatcgatcgcttcatagaa
gagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatccgagagatctgt
agcctgttcggagaggctcctcagaatctcagaaagaaaattcctattaacatacaaacg
aacttagcgggtcagactcagaggagtcctcatgtgttctatcgtcatgacctgatcaac
cagctccaacacaaccatgccctggtcacactggtggctgagaacctctctgcctacatg
gagaccatgaggcagttctctaaagccgagcaggcagagtttgacccccagacggtgagg
gcagggagccgctacagccacgtacaggaagtccaggagagactcaacttcctgaggttc
ctgctgaaagatggccagttgtggctctgtgctcctcaggccaaacagatctggaagtgc
ctggccgaaaacgctgtcttcctatgtgatagagaggcctgcttcaaatggtacgctgcc
atcatcaatattatcacctcgaaagggtactccaagctgatgggagatgagccagacctg
gacccagacattaacaaggacttctttgagaacaacgtcctccagctggacccatctctg
ctcacagagaacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgccgggag
ggaaagctggtggccaaacgcagggcctacatgatggacgacctggagctcataggactg
gactacctctggagggtcgtaattcaagggagcgatgacatcgccagtcgagccatagac
ctgctgaaagagatctacaccaacctcggaccaaaactacaagtcaatcaggtagagatc
cacgaggatttcatccagtcgtgcttcgaccgtttgaaggcgtcgtacgatacgctgcgt
gtcctggacggggacaaggacagcatcaactcggcccggcaggaagccatccgcatggtc
cgcgtgctcactgtgctcaaggagtacatcaacgagtgtgacagcgactaccatgaggag
aggaccatactgcccatgtccagggcgttccgggggaagcacatcacgttgactgtgcgt
tttcctaaccagggccgtcaggtagatgacctggacatctggtctcacacaaacgacacc
atcggctcagtgcgccgtggcatcctcacacgcatcaaggccaacgccacgcacaccaag
atagagctcttcattggcggggatgtcgtcgacccagccgatgacagaaagctgattggc
cagctcaacctcaaagacaaaacgttgatcacagccaagctgacccaggtgagtgccaac
atgccgtccagcccagacagctcctcggactcttccaccggctcacctggtaaccacggc
aaccatttcagcgacgggcccaacccagaggtggagagctgtctccctggagtgatcatg
tctctccacctgcgctacatatctttcctgtggcaggtagcggacctgggctgtggcatt
aacatgcctctgttacgagatggagccagggtactcatgaagctaatgcctccagataac
agtaccgtggagatcctgcgtgccatgtgtctggaccatgccaagctgggagagaacagc
ctcagccccacactggactcgcgcttctttggcccctcgccatcacaagtcctctacctc
atagaagtggtgtatgccctactcatgccagccagcgccacattgggggaggatgccagc
gacttccagtacaacttcctgaagagtggcgggctgcctcttgtactgagcatgctcaca
cggaacaacttcctgccttcggccgacatggagacacggcgaggggcgtacctcaacgct
ctgaagatcgccaagctgctgctcaccgccgtggggttcggacacgttaaagctgtggcc
gaggcctgccagcccaatgctgaggggaccataccagtctcaccgatcaaccaggccact
catgaccaagccctggtcctccagagtgccctgcaaaacatccccaaccctgcctcagag
tgtatgctccgcaacgtagctatacgcctggctcagcagatctctgacgagaacttcttc
caggcgtccaagtacatcccagacatctgtgtgatccgggcggtgcagaagatagtgtgg
gcgtcgggctgtggcaccgtacagctagtctttagctccaacgaagagatcagcaagatc
tacgagaagacgaatgcggctaaggagccggacggggaggatgagcaggtgtgttgtgag
gccctggagatcatgaccctgtgtttctccctgctgcccaccgctctggacacactcagc
aaggagaaggcctggcagaccttcatcattgacctgctaatgcactgccacagcaagtca
gttcgtcagatggcccaggagcagttcttcctcatggccaccaggtgttgcatgggccat
cgaccccttctcttcttcatcaccctcctcttcactgtgctggggagcaccgctaaggag
cgggccaagcatgctggggactacttcaccctgctcaggcaccttctgaactatgcctac
aacagcaacatcaacctgcccaacgcagaggtgctgctcaacaatgaaatcgactggctc
aagaggatcagggatgaggtaaagaggacaggggagacgggcgtagaggaaaccatcctg
gagggccacatcgggatcaccaaggagctgctggccttccagacatcagagaagaagtac
tacatcggctgtgagaagggaggggccaacctcatcaaggagttgatagatgacttcatt
ttcccagcatcgaacgtgtacctgcagtacatgaagagtggggagttccccacggagcaa
gccatccctgtctgtagcagccccgcctctatcaacgcaggcttcgagctgctggtggcg
ctggcggtgggctgtgtccggaatctaaagcagatggtcgacacgctcactgatatgtac
tacctaggttgtgaggctttgacagagtgggagtatctccccccggtgggaccgaggcca
actaaaggctttgtgggactgaagaacgccggagccacctgctacatgaactctgtcatc
cagcagctctacatgatcccgcccatacgcaacggcattctggccatcgagggcaccggc
accgatgtggatgatgacatgtccggtgatgagaagcaggagaacgagagtaatgtggac
ccgcgagatgaggtgttcaactaccaccaccagtttgacgacaagccatcgctcagtaaa
tcggaggacaggaaggagtacaacatcggcgtgctgcgccacctgcaggtcatctttggc
cacctggcctcctccagactgcagtactacataccgagaggcttctggaaacagttcagg
ttatggggcgagcctgtgaacctgcgagagcagcatgatgccctggagttcttcaactct
ctagtggacagtctggacgaggctctgaaagccttgggtcacccagccatgctcagtaag
gtgctgggtggatcctttgctgaccagaagatctgccaggggtgcccacataggtatgag
tgtgaggagtcgttcaccactctgaatgtagacatcaggaaccaccagaacctgttggac
tcaatggagcagtacgtcaaaggagacctgctggagggtgctaacgcataccactgtgag
aagtgcaacaagaaggtggacacagtgaagcggctgctgatcaagaaacttcccccagtg
ctggccatccagctgaagaggtttgactacgactgggagagggagtgtgccatcaagttc
aatgactactttgagttccccagggagctggacatggagccctacactgtagccggggtg
gccaagctggagggggacgacgtcaacccagagaaccaggtgatccagcagaacgagccc
tctgaaccagagcccccaggcagctccaagtaccgcctggttggggtactggtccactca
ggccaggccagcggcggacactactactcctacatcacacagaggaacgtgggcggggca
gacggcgaacggaaccgctggtacaagtttgacgacggtgacgtgacggagtgcaagatg
gacgacgaggaggagatgaagaaccagtgcttcggaggggagtacatgggcgaggtgttt
gaccacatgatgaagaggatgtcgtaccggcgtcagaagcgctggtggaacgcatacatc
ctcttctacgagcggatggactcactggacaaggacagcgagctggtcaagtacattcag
gagctgaccatctcgtcctcgtccaacaacaagccgccgcaccaggtcaagatgcccggt
gtaatcgagtgcagtgtgcgcaagcagaatgtgcagttcatgcacaatcgtatgcagtac
agcctggagtatttccagtttgttaagaaacttctgacctgtaacagtgtctatttaaac
cctccgccaggacaagaccatctactgcctgaggcggaggagatggctatgattagtgtt
cagctggctgctaagttcctattcagcactgggttccacaccaagaaagtagtgaggggg
cccgccagtgactggtatgatgcactttgtgtcctgctgagacacagtaagaatgtacgc
tactggtttgcacacaacttcctgtttgcctacaccaaccgcttctccgagtacctgctg
gagtgccccagtgccgaggtccggggcgcgtttgccaaactcatcgtcttcattgcacac
ttctccctgcaagacggaccgtgcccctcccccactgcctctcctgtcggagcctccacc
caaccacaggcatgtgataacctgagtctcagtgaccacctgttgaggactgtattgaac
ctgctcaggagagaggtgtcagagcacggccgacacctgcagcagtacttcaacctcttc
gttatgtatgccaacctggggctggcagagaagacccagttgttgaagctgagtgtccca
gctaccttcatgctggtggctctagacgaggggcctggccctcccataaagtaccagtat
gctgaactaggcaaactgtacaccgtagtctcccaactggtgcgctgctgtgacgtggcc
gcgcgcatgcagtcctccatcaatggtaacccccctctccctaacccgtacggtgatgcc
aaccagaccaccccggtgatgcctgtgcagcagctggtgggagagatcctgttcgtaagg
accagctatgtgaaaaagataattgaggactgcagcaactcagaggagacagtcaagctg
ctgcgtttcagctgctgggaaaacccccagttctcctccactgtactatcagagctgctc
tggcaggtggcgtactcgtacacctacgagctgaggccttacctggacctgctgctgcag
atcctgctcattgaggactcctggcagactcacaggatccacaacgtgctgaagggtata
ccagatgacagggatggcctatttgacaccatccagcgctccaagaaccactaccagaaa
cgggcctaccagtgtatcaagtgcatggtagccctcttcagcaactgctctgtggcctac
cagatactacagagtaacggagacctgaagcgtaagtggacgtgggcagtggagtggctc
ggtgacgagctggaaaggaggccctacacagggaaccctcagtacacctacaacaactgg
tctcccccagtccagagcaacgagacctccaacggatacttcctggagcgctcgcactcc
gcacgcatgaccctggccaaggcctgtgaactctgccctgaggagtgtcacttaacgaag
cacggtgaggcggtgtctgaagaagatgctgccatgcggaaaacgtcctcgccacagcag
cttttgccaggggaagggacaggacagcagcacactgagcccgatgaccaggaagccccg
gaagatcaggacacctcccctccagatgacatctccctctaccctcattcgtctccgggg
actacgacacagtttcagcagcagaacaaccacccccacgggcagccgtacacaggccca
gctgcccagcacatgaacaacccccagcgccccggccctgtcccttcctctgccccaggc
cctgcgcccggcacaggcccacaagcacaagacaactgggagagcactgaggaggtcccc
tccaccacctccttggcccctgctccgcctaaggagtaa
DBGET
integrated database retrieval system
