Oncorhynchus mykiss (rainbow trout): 110502052
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Entry
110502052 CDS
T07259
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110502052 (col28a2a)
Peptidases and inhibitors [BR:
omy01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
110502052 (col28a2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Pentapeptide_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
110502052
NCBI-ProteinID:
XP_036814732
LinkDB
All DBs
Position
22:complement(15446052..15480514)
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AA seq
1437 aa
AA seq
DB search
MLFPAVTWFLLVAGLLGVWAQDYYEERTVNKRPRGRGAQLQAPAIATNVQKHNGQAILDE
DCGLELTFLLDSSESAKENHEQEKRFAMDVVDRLQAARLQTGRSLSWKAALLQYSSHVII
EQTFKQWRGTDNFKSHITPIVYIGHGTYTTYAITNMTKMYLEESSPGNIKVAMLLTDGIS
HPRNPDIFSAAADAKNQGVKFFTVGITRAANESANVAQLSLLASSPASRYLHNLQDIDIV
EKVLKEITDLADEGCPPAQQCACEKGERGLSGLAGKKGRPGDDGAPGLKGLKGEGGRSGL
PGRDGGEGKSGYKGERGERGECGTPGMKGDRGPEGPMGTRGVRGLQGLPGPQGDVGPEGP
QGKKGDRGQAGPAGIQGENGIGLPGPKGDLGFQGKPGPPGPTGLSEYGQPGPQGPQGFQG
EKGPHGEGLPGPKGDRGLAGPRGPRGQTGAGIKGEKGEFGPPGHPGLVGLTGAGIQGEKG
VEGPRGPPGGRGPQGEGLPGPKGDQGFPGELGATGERGVGEPGPKGELGTSGLAGLPGLP
GEDGAPGQKGEAGVAGIRGPDGAAGIGTQGEKGDQGQRGIRGLHGPPGMTGPSGAKGEPG
TPGRLGMPGLPGRAIAGPKGDLGPPGPSGPTGETGYGLPGPKGDRGNPGPTGPFGSKGEG
FPGPVGPPGLPGLQGEQGPEGIGIPGPKGDIGFRGLPGLPGPKGKGVQGPPGNIGRKGPP
GPNGPPGEGLQGPKGEQGSQGVTGPRGPIGEGFPGGKGDRGLQGERGNKGVKGGMGDSGV
PGESGRPGVKGEVGLTREDIIKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIK
DFVTALVDRTTVGRNATRIGLVLYSLDVHLEFNLARYMTKQDVKQAIRKMSYVGEGTYTS
TAIRKATQEAFYSARTGVRKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNT
SDTTQAEFLRELNLIASDPDSEHMYLIDDFNTLPALESKLVSQFCEDENGALVLNRNTNG
FGRNGNNGYGNNGYGNNGHGINGQGNSGQGNNEQGNSGQGNYGQGNSGQGNSGQGNSGQG
NSGQGNSGQGNSGQGNSGQGNSGQGNYGQGNSGQGNNGQGNNGQGNSGQGNNGQGNSGQG
NSGQGNSGQGNSGQGNNGQGNSGQGNSGQGNSGQGNNRQGNSGQGNSGQGNNGQGNSGQG
NNGQGNSGQGNSGQGNSGQGNNGQGNSGHGNSGQGNSGHGNNGHLNNEHGNTYNEDPILN
PSGRTSSQSHIRGRGDNFDLPLNAGPLPVQVDDEEGEDLDVRTHMRGGSTVAVANKTVSI
FPAKESSHSNTAVSSSGSASSSSGTTGSASSSSEGQFQPVSIPIPNSIFPQESVSLNPRC
NLSLDQGTCREYNIQWYYDKQANSCAQFWYGSCEGNANRFETEEACKKTCVLSRTAG
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgttgttccctgctgtgacctggttcctgttggtagcagggctgttgggtgtctgggct
caggactactatgaagagagaacagtgaacaagagacccaggggcaggggggcccaactg
caagctccagccattgcaactaacgtgcaaaaacataatggacaagccattttagatgag
gactgcggtctggagcttacctttctgctggacagctctgagagtgccaaggagaaccat
gagcaggagaagcgctttgccatggatgtggtggacaggctccaggccgcccgtctgcag
acgggccgcagtctgagctggaaggcggctctgctgcagtacagcagtcacgtcatcatc
gagcagaccttcaagcagtggaggggcaccgacaacttcaagtcccacatcacccccatt
gtctacatcggccacggcacctacaccacctacgccatcaccaacatgaccaagatgtac
ctggaggagtccagcccaggcaacatcaaggtggccatgctgctcactgacggcatctcc
caccccaggaatccagacatcttctcagctgccgctgacgccaagaaccagggggtgaag
ttcttcacggtgggcatcacccgtgcagccaacgagtcagccaacgtggcccagctgagt
ttgttggccagttctcctgcctcccgatacctccacaacctgcaggatattgacattgtg
gagaaagtcctcaaagaaattactgacctggctgatgaagggtgtcccccggcccaacaa
tgtgcctgtgagaagggcgaaagaggactcagtggcttagccgggaagaagggtcgccct
ggagatgatggagcccctggtctcaaaggattgaagggagagggaggacgaagtggactt
ccaggtcgggatggcggagaaggtaaatctggttacaaaggagagaggggtgagagaggc
gagtgtggcactccaggaatgaaaggggacaggggtcctgagggcccaatgggcaccaga
ggagtcagaggtctccagggtttacccggtccacagggtgacgttggacctgagggccct
cagggtaagaagggtgatcggggtcaagctggcccggccggaattcagggagaaaatggt
attggacttcctggaccaaagggtgatctgggattccagggaaaacccggcccccctggt
ccgacagggttgagtgaatatggccagccagggcctcaagggccacaaggttttcaaggg
gagaaaggaccccacggagaggggctccctgggccaaagggagaccgggggctggccgga
ccgagggggccaagaggacagacgggtgcaggaatcaaaggagaaaagggtgagttcggg
cctcctggtcatccaggactggttggacttacaggagcgggcatccagggggagaaggga
gtggagggtcccagaggtccacctggaggcagaggacctcaaggagagggcttacctgga
cctaagggtgatcaaggtttcccaggagagctcggagctacaggggagagaggcgttggt
gagccagggccaaagggtgagcttggtacatctggcctggctggcttacctggtcttcca
ggcgaggacggggctccaggacagaagggtgaggcgggtgtagctggtataagaggtcct
gatggagcagcaggaatcggcacccagggcgagaagggagaccagggtcagaggggcatc
cgtggattacatggacctcctggcatgaccggaccctcaggggcaaagggggagcctggc
acaccaggccgactgggcatgccaggactaccgggacgggccattgcaggtcccaagggt
gatctaggcccacctggtccctctgggccgactggagagacaggctatgggctacctggg
ccaaagggtgaccgtggtaatcctggtccaacaggaccttttggatccaaaggtgaaggt
ttccctggcccagtgggtcctccaggccttccaggtctacagggagagcagggccctgag
ggcattggcatcccaggacctaagggagacattggcttcagaggattgccaggtttgcca
ggcccaaaaggaaagggtgtgcaaggaccaccgggtaacattggaaggaaaggaccccct
ggtccaaatgggcccccaggggaaggtctgcagggccccaagggtgagcaggggtctcag
ggtgtgacagggccaaggggacccataggggaaggattcccaggaggtaagggtgaccgt
ggcttgcagggtgagagaggaaataagggtgtaaaggggggcatgggagattctggggtt
cctggagagtctgggaggccaggagtaaagggtgaagtggggcttacaagagaagacatc
attaaattgatcaaggaaatatgtggatgtggaatcaagtgcaaggagaggccaatggag
cttgtattcgtcattgacagctcagagagcgttggtccggaaaactttgaaatcatcaag
gactttgtcacagcgctggtggaccgtaccactgttggacgtaacgccaccagaattgga
ttagtcctgtacagtctggatgtccacctggagttcaatctggcgcgctacatgaccaaa
caagatgtcaagcaggccatcaggaagatgtcctacgtgggtgagggaacctatactagc
accgccatccggaaggctacccaggaggccttctacagtgcccgtactggggttaggaaa
gtggccattgttatcacagatggacagacagacaaacgagagcctgtgaagctggacatt
gctgtgagggaggcccatgctgccaacattgagatgtatgccctggggattgtcaacacc
tcagatacaacccaggccgagttcctgcgtgaactaaatctgatcgcctctgaccctgac
agtgaacatatgtacctcatcgacgatttcaacactctaccagctctggagtcaaagctt
gttagccagttctgtgaggatgagaatggagcccttgtgttgaatcgcaacactaatggc
tttggaagaaatgggaacaacggctatgggaacaacggctatgggaacaacggacatggg
attaacggacaggggaatagcggacaggggaataacgaacaggggaatagcggacagggg
aattacggacaggggaatagcggacaggggaatagcggacaggggaatagcggacagggg
aatagcggacaggggaatagcggacaggggaatagcggacaggggaatagcggacagggg
aatagcggacaggggaattacggacaggggaatagcggacaggggaataacggacagggg
aataacggacaggggaatagcggacaggggaataacggacaggggaatagcggacagggg
aatagcggacaggggaatagcggacaggggaatagcggacaggggaataacggacagggg
aatagcggacaggggaatagcggacaggggaatagcggacaggggaataacagacagggg
aatagcggacagggaaatagcggacaggggaataacggacagggaaatagcggacagggg
aataacggacaggggaatagcggacaggggaatagcggacaggggaatagcggacagggg
aataacggacaggggaatagcggacatgggaatagcggacaggggaatagcggacatggg
aataacggacatttgaataatgaacatggaaacacctataatgaggatcctatcctaaat
ccaagtggacgcaccagttcccagagtcacatcagaggccgtggagataactttgatctg
cccctcaatgctggaccactcccagtgcaggtggatgatgaagagggtgaagatttagac
gtaaggacccacatgcgaggaggtagtactgtggctgtagctaacaaaacagtatccatc
ttccctgcaaaggaaagctcccactccaacacagctgtctcgtcatcaggatcagcatca
tcatcctcaggaacaacaggttcagcttcatcatccagcgagggccaatttcagcctgta
tcaattcctatccctaattctattttcccccaagagtccgtctcgctcaatccccgctgt
aacctgagtttggaccaaggcacctgtcgagagtataacatccagtggtattacgacaaa
caggccaattcctgtgcacagttctggtatggaagctgtgaaggaaatgccaaccgcttt
gagacagaggaggcgtgtaagaagacctgtgttctatctagaacagctggttaa
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integrated database retrieval system
