Oncorhynchus mykiss (rainbow trout): 110502065
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Entry
110502065 CDS
T07259
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110502065 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110502065 (hdac4)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110502065 (hdac4)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110502065 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
110502065
NCBI-ProteinID:
XP_036814844
Ensembl:
ENSOMYG00000016587
LinkDB
All DBs
Position
22:complement(20379465..20660978)
Genome browser
AA seq
1065 aa
AA seq
DB search
MLRTIFETDSPSSLSPADGLPRKEQPLELLKPSGLNHIQSVDVRAALPMQVPPAAIPMDL
RMDQPFGLAPRPDDQGHQGQVPGLREQQLQQELLALKHKQQIQRQLLIAEFQRQHEQLSR
QHEVQLQEHVKHQQDLLALKHQQELLEHQRKMERHRQEQEMEKQQREQKLLLLKNKERGQ
ESAVASTEVKMRLQEFVLNKKKALAQRSLNHCMNTDPRYWYGKTQHSSLDQSSPPQTGMS
PYSHAILGMYDPKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPIITTAKKR
SLDMAESACNSAPGSGPSSPNNSSSNITNENGIASTVEASLAHRLAGREGPLSQLSLYTS
PSLPNITLGLPATGPSSMTSGQQDGDRLSMHERLQQGFPITTPFIPGAHLPSYLTDGGSA
HNPLLQHMVLLEQSQNPLGLSCCLGGLPLQSPSIHKLRGQHRPLGRTQSAPLPQNAQALQ
QLVVQQQHQQFLEKHKQQFQQQQLHINKMMAKPSEPGPGRQHESHPEETEEELREHQALC
PQEGVLMRGVTVKQEPLDPQEEERDNRERMVDQELLFRQQAVLLEQQRMIQLRNYQASME
SAGLSVTFPVHRPLSRAQSSPASACFPPIVVQQEPPIKPRFTTGLVYDTLMQKHQCMCGN
TNTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQK
LDSSLTPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGSVVELVFKVAAGELKNGFAVV
RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPNI
LYLSLHRYDDGNFFPGSGAPDEVGTGAGMGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMP
IANEFSPDVVLVSSGFDAVDGHASPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHD
LTAICDASEACVSALLGIELDPIPEEVMQQRPNPNAVHSMEKVLEEHGKYWRSLQRGAST
LGHSLSEARQCETEEAETVTAMASLSVANKQRRSEEEPMEEEVPL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaccatatttgaaacggactctccttcctctctctcccctgcagatggactg
cccaggaaagagcagcccttggaacttctgaagccatctggcctcaaccacatccaatct
gtcgacgtgagagcggcactgcccatgcaggtgcccccggccgccatccccatggacctg
cgcatggaccagccctttggcctggcaccgcgaccagacgaccagggccaccaaggacag
gtcccaggtcttcgggagcagcagctgcagcaggagctgttggccctcaaacacaaacag
cagatccagagacagctgctcatcgccgagttccagcggcaacatgagcagctctcacgc
cagcatgaggtccagctacaggagcatgttaagcaccagcaggacctcctggccctgaag
catcagcaggagctgctggagcaccagaggaagatggagagacaccgccaagagcaggag
atggagaagcagcagagggagcagaaactcctactgctcaagaacaaggagcgtggccag
gagagtgcggtggccagcacggaggtcaagatgcggctgcaggagtttgtcctgaacaag
aagaaagccctggctcagcgcagcctcaaccactgcatgaacactgaccctcgctactgg
tacgggaagacccagcacagctccctggatcagagctcccctccccagacagggatgtcc
ccttacagccacgccatcctggggatgtacgaccccaaagacgactttcctctccgcaag
acagcctctgagcccaacttgaagctccggtccaggcttaaacagaaggtgacagagcgc
agaagtagcccactgctacgtaggaaggatggtccaataatcactactgccaagaagcgc
tctctggacatggctgaatcggcctgcaacagcgcacctggctcgggccccagttcgccc
aacaacagctccagtaacatcaccaatgagaacggcatcgctagtacagtcgaggcctcc
ctggcccacaggctggccggccgagagggccccttgagccagctgtctctgtacacatcg
ccctcactgcctaacatcaccctgggcctgccagccaccggcccgtccagcatgacgtca
ggccagcaggatggtgacaggctatcgatgcatgagaggctgcagcagggcttccccata
accactcccttcatcccgggggcccacctgccctcctacctgactgatgggggctcggca
cacaaccccctcctccagcacatggtgctcctggagcagtcccagaacccactaggtctg
tcctgctgcctgggcgggctgcccttgcagtcgccctccatccacaagctgcgtgggcag
caccgtcccctagggaggacccagtcggcccctctgccccagaacgcccaggccctgcag
cagctggtggtccagcagcagcaccagcagttcctggagaaacacaagcagcagttccag
cagcagcaactgcacatcaacaagatgatggccaagcccagcgaaccagggccgggtcga
cagcacgagagccacccggaggagacagaagaggagctaagggagcaccaagccctgtgt
ccccaggaaggagtcctcatgcgcggggtgacggtcaagcaggagcccctggaccctcag
gaagaggagagggacaaccgagagaggatggtcgaccaggagctgctcttcagacagcag
gctgtgttattggagcagcagaggatgatccagttaaggaactaccaggcttccatggag
tcagccggcctgtcagtcaccttcccagtgcaccgccccctctccagggcccaatcatct
cccgcctcggcctgcttcccccccattgtggtacagcaggagccgcccatcaagcctcgc
ttcaccactggcctggtgtatgacacgttgatgcagaagcaccagtgtatgtgtggcaac
accaacacacaccccgagcacgccggacgcatccagagcatctggtcccgactgcaggag
actggactgaggggcaagtgtgagtgtatccgagggcggaaagccactctggaggagttg
cagacggttcactctgaagcccacgtccttctgtatggaaccaacccactccgacagaaa
ctagacagttcattgactcccatgtttgtgaggctgccttgtggaggggtaggggtggac
agcgacaccatttggaacgaggtccactcgtccagcgcggctcgtctggctgtgggctcc
gttgtggagctggtcttcaaagtggcggctggagagctcaagaacggctttgctgtagtc
cggccccctggacaccacgcggaggagagcacacctatgggattctgttacttcaactcc
gtggccatcgcagctaaacttctgcagcagaggctcagtgtcagtaagatcctgattgtg
gattgggatgttcaccatggaaatggcacgcaacaagcattctacagtgaccccaacatt
ctctatctgtcactccatcgctacgacgatggcaacttcttccccggcagtggagcgcct
gatgaggtgggcactggggcaggcatgggcttcaatgtgaacatggctttcactgggggg
ctagaaccacccatgggagacgcagagtacctggctgccttcaggacggtggtgatgccc
atcgccaatgagttttctcctgacgtggttctggtgtcttcaggattcgatgctgtggac
ggccacgcatcacccctgggagggtacaagctaacagccaaatgtttcggctacctgacc
aggcagctgatggggctggccgggggacgcctggtactggccctggaggggggccatgac
ctcactgccatctgcgatgcctctgaagcctgcgtctctgctttgctaggaatcgagttg
gatcctatccctgaggaggtgatgcagcagaggcccaaccccaacgctgtccactccatg
gagaaggtgctggaggaacatggtaaatactggcgatctctgcagcgcggggcctccaca
ctgggccactctctgagcgaggctcgtcagtgtgagacggaggaggccgagaccgtcact
gccatggcctctctctctgtggccaacaagcagaggaggagcgaagaggagcctatggag
gaggaggtgcctctgtaa
DBGET
integrated database retrieval system
