Oncorhynchus mykiss (rainbow trout): 110502224
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Entry
110502224 CDS
T07259
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110502224
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Cadherin related
110502224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
EGF
Big_9
hEGF
EGF_Teneurin
cEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
110502224
NCBI-ProteinID:
XP_036790199
LinkDB
All DBs
Position
2:83498149..83611296
Genome browser
AA seq
2668 aa
AA seq
DB search
MNLSPAKFQAASFELVYPETDITPINVGKESGHIVVARRLDRETEPFVEFTVKIQDQQGP
DWYLTKVKLMVTDVNDNVPEWAMEPYPYLAVVSSEAPPGVLVYLLHARDGDEGSNGEVEY
FLADGGDGCFAVDKNSGHVLTTGLPLQRDREYLLSVVAFDRLGSRSAPAMVSVIAGPRAP
QFTNASYVISIPENTPEGQSFLVVLAISFQKQPICYSLLINPSSLFSMQQETGEISLTRT
LDYENDQRRYLLMVRASEGPGGLSSAIEVQVVITDENDCVPEFLQSIYSVDGVSETVTTA
TSLLQDFCTSATVLASDCDSGLNAELTYYTLSPDFSISPHGTIFPAGRLDYERPNHLYEF
VVMAVDNGEEPHSGTATIRIRMANINDQAPEFSQTVYRTFVSEDAGPNTLVATVLAKDPD
GDGIVYSITAGNEEGNFVIDSQKGLIRLRFTPAPKLQGLEYVLNVTATDDNASGGPHPLS
ATAWVIVGVDDVNNNKPVFEKCQQYREQASVLENQLTGTFVLQVHAVDADEGANGKVKYG
LMHRDSAIPAFRVHHDTGVIVTARRFDRERQREYSITVTATDWAEEPLIGICQLNVIILD
QNDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDDDFGTNAAVTYSISQEQPEYLRVNPV
TGWVYVNQPISQRSSITREIMATDGGNRSTSVEMSVTITNVKNQPPQWEKDSYSVVIPEN
TARDTPIVTIKATSLLGDPRVTYNLEEGVVPETNMPVRFYLSPNREDGSASILVSEPLDY
ETTPSFSLRVRAQNLAAVPLAAFTTIYVNVTDVNDNVPFFTSSIYEASVTEGAKVGTMVL
QVSAQDKDLAFNGQITYSLLSDSSGDHRLFRVDPELGSIYTEAVFDREAQGSYLLEVQSE
DGMESARPGRNKQPNSDTAYVRVFISDVNDNKPVFAQRLYEVGVDEDADIGLAVVTVSAN
DEDEGANAKLRYQITSGNTRGVFDMEPEVGTIFVAQPLDYEQQKRYKLLVLASDGKWEDY
AAVVVNVVNKNDEAPVFSMNEYYGSVTEELDGSPVFVLQVTATDPDKDADQDAVRYSLHG
QGADSQFMVNENTGEMYAQKTLDREERAVWRFVVLATDEKGEGLTGFTDVIINVWDINDN
EPAFTCAPDGCHGNVAENSPPGTFVMEMMAADLDDTAVGQNAILTYRIIKNARDADSEEL
FTIDTSTGTISVVTGGLDREVAERHQLVVEARDGGDMVGTATATIIIMDLNDHTPRFKDE
WCGARVSESSPPDSTVLELEAVDPDSGPHGLLGFSVVAGDQWERFYMVSHRAEQSGSLKL
RKGLDYERPGEQRFNLTIQVEDSDFSSLIHCIIQVLDENDHIPEFTTTFYPLAPLVEDVA
VGTSITQVMANDSDSDLNGEIVYSISPESDPYGNFIVDRDGIVTVTRPLDRETMPEYQLV
VMATDRGSLALTGSATVQLSLLDVNDNGPELEVAYTPVLWENSPAPQLVWLNQTSTLLHV
IDRDSPENGPPFSLALPRLYAPDFHLQDHGNGTATLTALRRFDRERQREFLLPVVMTDSG
RPPMTVTNTLTITVGDQNDNAHQEGEKEIYFHSRRGRMQTTSLGKVYAPDQDDWDNKTYT
LDAGGMRYFTLNRSSGHLAIRQNTLAGSYYLRVGVSDGVWPDVVSGVTVHVRELEDMAIH
SSASLRLTGITAREFIESRVDERSRQDMFRSFLSEHLSIRSGTINVFSLTDVRPKTLDVR
FSVHSDGYLRPEKLHGYLAAHIKKLQSLLRVNVSQVEVDECVYTDCRPGGGCSTQLSVSD
TPTLVDAGNIALVSMTMMSSARCGCSARDRVHQACSSYRTNPCFNGGTCMDTLSGYRCQC
PPQHEGPECQQTRRSFLGNGYAWFPPIRPCFDSHLSLEFITEAEDGLLLYSGPLATLQPG
DPEDYMAIELIGGTPSLKINHGSGTLVLQLQGNMVVSDRRWHRLDVRSNSKDVHFTLDRC
SSAIVMETEGVDSWAMTEDRSSCEVRGVTPNRDRYLNVSQVLQLGGVNENMSYEYPQLQQ
KHFNGCLRNLVVDSKLYDLGSPSASSSTAPGCSLTDGNCMNMGVPVCGARGHCNGQWDSF
SCQCGPGYTGIHCEDEVPEFSFNGRSHVQYQVGWSLPARHTSFQLQVRTHTPSGVLLSLL
SQEQNEYLRLEMFQGLLAVFYNLGDRPYNLTLPFHRLDNGEWHEVELDRHGKEFTLQLDG
GGGRREVTAAPGRSQEIVIDQSVVMLGNSFPSGHNRSFLGCLRDLRLNGRPMPIAKEPSV
GSEGLQVVTSQGVSPGCPSDACRKHQCSPPFICMDLWRKHECRCPPGHMMKKNASGKVCV
YTLCASRPCRHGTCVAHSPSKYSCHCSEGYRGLHCEVSLALYHNDDSNTLSLSSAFAISI
CVLAFLVLMLGLFLYSCWRRHKGLKESVYHVSAHHGEWEDIRENVLNYDEEGGGEQDQNV
FNMVELQRSLQPSPAQSLRYSYPQCIISYPQTTKPPDTKNGTKPKGSNEPRIGSTAIALR
LAHPPSGSATLPSPLAMRQSHKSLSFSSQDLARYLCEIIRDTDHPLGDNPGFMTSQRRLS
NRGQHGGLVVRSLSSLSAGGQGSEVRVQGSQESLERQRAQSPRLDRLKALRAVVSELRVD
AAVDCCHQEHRGTEGQSEGEGDQGAGQL
NT seq
8007 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgagcccagccaagtttcaggcagcctcatttgagctggtttacccggagaca
gatatcaccccaatcaacgtgggcaaggagagtggacatatcgtggtagccaggcgcctg
gacagggagactgaaccgttcgtggaatttactgtcaaaatacaagatcaacaagggcct
gactggtacctgaccaaggtgaagctgatggtgacagatgtcaacgacaatgtccccgag
tgggctatggagccatacccctacctggccgtggtgtcctccgaggccccccctggggtg
ctggtttacctgctccatgcccgcgatggggatgagggcagcaatggcgaggtggagtac
tttctggccgatggtggtgatggctgctttgcagtggacaagaatagtggtcacgtcctg
accacgggtctccccttgcagagagacagggagtatctgctgagtgtggtggcctttgac
aggctgggaagccgcagtgctccggctatggtgtcggtcatagcaggacccagagcacca
cagttcaccaacgcgtcctacgttatctccataccagagaacaccccagagggacagtcc
ttcctggtggtgttggccatctccttccagaagcagccaatctgctacagcctgctgatc
aaccccagcagcctgttcagcatgcagcaggagacgggggagatcagcctgacccgcacg
ctggactatgagaatgaccagagacgatacctcctcatggtcagggccagtgagggtcca
gggggcctcagcagcgccatcgaagtccaggtggtgataacggatgaaaacgactgtgtc
ccagaatttctccagtccatttacagcgttgatggagtctctgagacagtcaccacagca
acctctctcctgcaagacttctgtacctctgctacagtgttagccagtgactgtgactct
gggttgaatgcggagctcacctactacactctaagcccagacttcagcatttctccccac
ggaaccatcttccctgcgggccgtctggactacgagaggcccaaccacctgtatgagttt
gtggtgatggctgtggataacggggaggagcctcactcgggcaccgccaccatccgcatc
cgcatggccaacatcaacgaccaggccccagagttctcccagactgtctatcggaccttt
gtctctgaggatgcaggccccaacactctcgttgccacggtactggctaaggacccggat
ggtgatggaatagtgtactcaattacagctggcaacgaggagggcaactttgtcatcgac
agccagaaagggttgatccgtctgcgcttcacccccgctcccaagctccagggcctggag
tacgtcctcaatgtaacagctacagacgacaacgcctctggggggccacacccactctct
gccaccgcctgggtcatagtgggtgttgatgatgtcaacaacaacaaacccgtctttgag
aagtgtcagcagtacagggagcaggcgtccgtgttggagaaccagctcacaggaaccttc
gtattacaagtgcacgcggtggatgcagacgagggggccaatgggaaggtcaagtacggc
ctgatgcacagagacagcgccatacctgccttcagagtccaccatgacacaggtgtgatc
gtgacagcgcggcggttcgaccgggagcgtcagagagagtactccatcacggtgacggct
acagactgggctgaggagccccttatagggatctgtcagctcaacgtcatcatcctggac
cagaatgacaacagccccaagtttgagaacctacgctacgagtattttctgagagaggac
acaatgatcggcaccagtttcctgcgtgtggcggcacatgacgacgactttggtaccaac
gctgccgtcacctactccatatcccaggagcagcctgagtacctgagggtgaaccctgtt
accggctgggtgtacgtcaaccagcccatatcacagaggtcctccattacccgggagatt
atggccacggacggggggaaccgcagcacatctgtagagatgtctgtgaccattaccaat
gtgaagaaccagcccccgcagtgggaaaaggacagctacagcgtggtcatcccagagaac
actgccagggatactcccattgtgacgatcaaagcaacctcgttgctaggcgaccccagg
gtgacctataacctggaggagggtgtggtcccggagactaacatgcccgtgcgcttctac
ctgtcgcccaatcgcgaggatggctcagcctccatcctggtttcggagccgttggactac
gagaccacgcccagtttctccctgagggtgcgggctcagaacttagcagcggtaccactg
gctgcattcaccaccatctatgtcaatgtcacagatgtgaacgacaatgttccattcttc
acctcctccatctatgaggcttcagtgacggagggagccaaggtggggaccatggtcctc
caggtgtctgctcaagacaaggacctggctttcaatggacagatcacttactccctcttg
agtgacagtagtggggaccaccgtctatttcgtgtagatccagagctgggctccatttat
acagaggctgtgtttgaccgcgaggcgcagggatcctacctactggaggttcagtctgaa
gacggcatggagtcagcacggcctgggaggaacaaacagcccaactctgacacagcatat
gtgcgggttttcatcagcgacgtgaacgataacaaacccgtctttgctcagcgcctctat
gaagttggggttgacgaggatgcagatatcggcctggctgttgtcactgtcagtgctaat
gacgaagatgaaggtgccaatgccaagttgcgctaccagataacttcgggcaacacaagg
ggggtgtttgacatggagcctgaggtgggaaccatctttgtcgcccagcctctggactac
gagcagcagaagaggtacaagctgctggtgctggcatcggacggaaagtgggaggactac
gccgccgtggtggtcaacgtggtcaacaagaatgatgaggcgcccgtcttctccatgaat
gagtactatggctcagtgacagaggagctagatggctcaccggtctttgtgctccaggtg
acggccacggacccagacaaggatgcagaccaggacgccgtccgctactctctccatggt
cagggggcggactctcagtttatggttaatgagaacacgggggagatgtacgcccagaag
acgctggaccgcgaggagcgggctgtgtggcgcttcgtggtcctggccacggacgagaaa
ggggaggggctcaccggcttcactgacgtcatcatcaacgtgtgggacatcaatgacaac
gagcccgctttcacctgcgcacccgatggctgccacggcaacgtagccgagaactcaccc
ccaggaacttttgtcatggagatgatggcggcagaccttgacgacacggcagtgggtcag
aacgccatcctcacctatcgtatcatcaagaacgcccgtgacgcagattctgaggaacta
tttacaatcgacactagtacgggcaccatctccgtggtgaccggcgggctggacagggag
gtggcagagcggcaccagctggtggtcgaagccagggatggaggggacatggtgggtaca
gctaccgccactatcatcatcatggacctgaacgaccataccccccggttcaaagatgag
tggtgtggggctcgtgtgtctgagagcagccctccagactcaaccgtgctggagctggaa
gctgtggacccagactctggccctcacggcctgctgggtttcagtgtggtggcgggggac
cagtgggagaggttctacatggtgagccacagagcagagcagtctgggagtctgaagctg
aggaaggggctggactatgagaggcccggagagcagcgcttcaacctcacaatccaggtg
gaggactctgacttctccagcctcatccactgcatcatccaggtgctggatgagaacgac
cacatccctgagttcaccaccaccttctaccccctcgctcctctagtggaggatgttgcc
gtgggaaccagcatcacccaggtgatggccaatgactcagactctgacctgaatggggaa
atagtctacagcatctccccggagtcagacccgtacggtaattttatagtggaccgagac
ggcattgtgaccgtgacccgcccgctggacagagagacaatgcccgagtaccagctggtt
gtcatggcgacagaccgcggaagtctggcgttgacggggagcgccacggtccagctgagc
ctgcttgatgttaatgacaatgggccagagctggaggtggcctatacccctgtcctctgg
gagaacagccctgctccacagctggtgtggctcaaccagacctccacgctgctccacgtt
atcgacagggactccccagagaatgggcctcccttctccctcgcccttccccgtctttac
gcccccgacttccacctgcaggaccatggcaatggcacggcaacgctcacagcgctgcgc
cgcttcgaccgtgagcgccagagggagttcctcctgcccgtggtcatgacggacagcggc
cgtccgccaatgacggtcaccaacacgctcaccatcaccgtgggcgaccagaatgacaac
gcccaccaggagggagagaaggagatttactttcacagccggaggggaaggatgcagact
acttcgctgggcaaggtctatgcccctgatcaagatgattgggacaacaagacctacacc
ttagacgcaggaggaatgaggtatttcactctaaacaggagttcaggccacctggccatc
agacagaacaccctagcagggagctactatctcagagtgggagtgtcggacggggtgtgg
ccagacgtggtgtctggggtcacagttcacgtccgggagctagaagacatggccatccac
tcgtcagcctccctgcgtctgaccggcatcactgccagagagtttattgagtcccgggtg
gacgagaggagtcgacaggatatgttcaggagcttcctgtctgaacacctgtccatcaga
tcaggcacaatcaacgtcttcagcctgacagacgttagaccgaagacgctggacgtgcgc
ttctctgtgcacagcgatggctacctgcgtccagagaaactacacggatacctggcggcg
catataaagaagctgcagtctctgctgcgggtgaacgtgtcccaggtagaggtggatgag
tgtgtgtacacagactgcaggccgggtggcggctgctccacacagctcagcgtcagtgac
acacccaccctggtcgatgccgggaacatagcactggtgtctatgacgatgatgtcctct
gcccggtgtggctgctctgccagggaccgggtccatcaggcttgttcctcctaccgcaca
aacccctgcttcaatggaggcacctgcatggataccctcagtgggtacaggtgccagtgc
ccaccgcagcatgagggtcctgaatgccagcagacgaggcgaagtttccttggcaacggc
tatgcctggtttcctcccataaggccgtgctttgatagccatctttccctggagttcatc
acagaggctgaggacggcctgctactctacagcgggcccctggccaccctgcagcctgga
gacccagaagactacatggctatagagctgattggtggaacacccagtctgaagatcaac
cacgggtctgggaccctggtcctgcagttgcagggcaacatggttgtgtctgacagacgc
tggcaccgactggatgttagaagcaacagtaaagatgtgcatttcaccctggaccgctgc
tccagtgctatcgttatggaaactgagggtgtggacagctgggccatgactgaggaccgc
tcctcctgtgaggtcagaggagtcacacctaatagggacaggtacctgaatgtgagtcag
gtgttgcagctaggtggggtcaacgagaacatgtcctatgagtatccccagctacagcaa
aagcacttcaatggttgtctgcgcaacctggttgtggacagtaagctctatgaccttggc
tctccctcggcatcctccagcactgccccaggctgctctctgactgatgggaactgtatg
aacatgggtgtaccagtctgtggtgccagggggcactgtaatgggcagtgggactccttc
agctgccagtgtgggcccgggtacacagggatccactgtgaagatgaagttccagagttt
tccttcaatgggaggagccatgtccagtaccaggtgggctggtcactccccgctcgtcac
accagctttcagctccaggtgcgaacccacacccccagcggtgtcctcctcagcctcctc
tcgcaggagcagaatgaatacttacgtctggagatgtttcaggggctactggctgtcttt
tacaacctgggtgacagaccctacaacctcacgctgcccttccatcgccttgacaatgga
gaatggcatgaggtggagcttgatcgtcatggcaaagagttcacccttcaattggacggt
ggcggtggaaggcgggaggttacggccgctcctgggcggagtcaggagatagtcatcgac
caatcagtggtgatgctgggaaactccttcccctcaggacacaaccgcagcttcctagga
tgtctgcgagacctaaggctgaacgggcggcccatgcccattgccaaggagccctctgtg
gggtctgaggggctccaggtggtcacttctcaaggggtctccccaggctgcccctcagat
gcctgcaggaaacaccagtgctctccccccttcatctgcatggatctttggaggaaacac
gagtgcaggtgcccccctggtcacatgatgaagaagaatgcctcgggcaaggtctgcgtc
tacacgctgtgcgccagcaggccctgtcgccatggcacctgtgtggcccactccccctcc
aagtactcgtgtcactgctcggagggctatcgcgggctccactgtgaggtctctctggca
ctgtaccacaacgacgacagcaacacgctgagcctcagctctgcgtttgccatcagtatc
tgtgtcctggccttcctagtgctgatgctgggcctgttcctctactcctgctggaggaga
cacaagggcctgaaggagagcgtctaccacgtatcagcacaccacggagaatgggaggac
atccgagagaacgtgctcaactatgatgaggagggcggaggggagcaggaccagaatgtc
ttcaacatggtggagttacagaggtctctgcagcccagcccagcccagtcactgagatac
agctacccacaatgcattatctcctaccctcagacgaccaagccaccggacaccaagaat
gggaccaaaccaaaaggatcaaacgaacccagaatcggcagcacagcgatcgccctgcgt
ctggcccaccctccgtccgggtctgctaccctcccctctcccctcgccatgcggcaatcc
cataagtccctgtccttctccagtcaggacctggcccgctacctgtgtgagatcataagg
gacacggaccatcccctgggggacaaccctggcttcatgacctcacagcgtcgcctgtcc
aatagggggcagcatggtggtctagttgtgcgctcacttagctccctcagtgctggaggt
caggggtcagaggttagggttcagggaagtcaggagagcctggagcgtcagagagcccag
agcccacggctggacaggctcaaagccctgcgagctgtagtcagtgagctcagagtggac
gctgctgtagactgctgccaccaagagcacagagggacagaaggacaaagcgaaggagag
ggagaccagggggcaggccaactgtga
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integrated database retrieval system