Oncorhynchus mykiss (rainbow trout): 110502315
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Entry
110502315 CDS
T07259
Name
(RefSeq) cilia- and flagella-associated protein 46 isoform X1
KO
K24938
cilia- and flagella-associated protein 46
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110502315
Cilium and associated proteins [BR:
omy03037
]
Motile cilia and associated proteins
Sperm associated proteins
110502315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_CFAP46_N
TPR_12
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
110502315
NCBI-ProteinID:
XP_021435924
LinkDB
All DBs
Position
23:15003235..15101520
Genome browser
AA seq
2661 aa
AA seq
DB search
MDLHIRQYLTKARQQKDTDALNAAYDMIREGSDTRCFCPELYVLCAEQALQLGCADISRD
CLMMYFEGKPPANQFLCRAYLCQGQLESPQSFGSVEEIEKAVIYFLKAIEISKVKPRYHF
LVFNASVLYFQMVRPLLRSGPRQHLVPTLTQVVKALEEVGEQDYSWRAQLMMHLVECLVD
AGKGKEASSFAKATSDFIESHIPDLYPKIFSLQVRHKLFDFTKTPQKTEASPVLSVIYKM
QKLKHKVDDVCEARKEDAARIKEIFLLLMHSAAAQSPVIARGSSPCLAESTSPIPPADRV
AFLLELAFLALQLKHHQMAADCLSELKTTGVTSVGQCIMMECVQCDLDLQKKQEGGMKDY
SKANVEAQLKVIGRLDKVLQSAVREGDAKVMQAVCASQWNTCLPLLQHNLRRNVKGALLK
VAQVLEDTYSVQLEMRCQVHSELAVIEEEEGRLEPALLHLQRALLLDERGVHHERLTSAL
NLLQLRGTLYQTPSSTEDQAAMLIQQAKNGQPQEEVRKRRPMLVNAGLTLAPDAFQVVLD
ADSTAKIPSGTSGPGGVAHLSAKAQHHSACVEKVQGHLSRQGDGKNDRERVKLWAALAKT
ARKQEVWDVCRAACRFCLLYDDGRWKATKSDCERKAGDESPVEGGLHGDRRPSAGRLSQS
AEKDLLRLLAEVCFINAEATIHKLRSEGVQLNTPAAPPEERGLRLPEDNPQWAVYRDWIQ
DLSAYATSNFLRGAELGAEIREAWVVVNAAVYLWNYNSHLVAVGEQRRLLPTFQRAVELL
RQTGHAGEPVLLVMLCDAVAQGLIQPWFVSAAGPGTGQGREDSGSRGELRKKVAGKGAER
TGSIHSLPLDHAALQDMRKALELCDYALHLSNGNVPVESVPIAARKQVISTWVWTKRLLQ
QQIGQKLDIDDECKNEAVSAMTRVLVGVEMLLCNSHPRQIEFSVPSLSTLVRMASDCKWS
DPVVELQVWTHLACFSHQAQDHNLVMTCSHNALQLEAAAAQRLTVMAYALYSQSAVQEML
SNAACLRGLSMVHKSNGHPHSYREALQMLQSSVSYAEQAGNSVLCMATARHYWNNCLPLT
ETSLERQQLRQPLEKILKALVHTSKKDPTQGKEKGGATLTGMPSVTSSLEASSMGSPEDD
LTLRAAMYGLLFHIHADSSDWTGALTLLEQAIRDMPRTRHRLLLFKHRVLVKARLGESVV
IDMQKFRGEGELYCSHMWHRVALCSGEMLQQLACYQNAITSLLSVKSQWQKADFLLEFGE
WLYCQNFPLSDAQHQIQWAIDILLHMIPDQEESNEKTGSKGSKLKELERRENSQGDESGE
GTGLIPVKVQSHVGVQGVVSGPCISDLREVRRLDSLVRAHTLLAVMGDRASPQHQHNLLT
AYSLVLQIWQVSMATACQVIKEMMKNPLVPTSRPCPSATAKKDKDKEKDKGKKSKEPPPA
EEKPKARRPQDDVLPSSPEEWAQYDCPGDVRQAFRYDTSPHCINRHSLSKQTQSLFFLDL
LVKELQSLSLTHLTLPILHLAEVIAHDLLDRRSLSDLYRLRIVRSCSQLDMETSTVYHEK
LLSLTGIHEQEQMECRKAIALQRERKRLYMGYNGKTDNEKSKVDHICLSGKQCGDLCSQD
IWLDKAEICLGMGLYQPARQLLAEAHLVAKELGDQAAAGRSLLSLAILANKEQNHSQALA
LLEKAQDMGGDEDFWYKLTLALLTATVTQRGQDIDTKTDQIVKQGCGALKSMLEKRHNRA
PALRFLITSLESRGAVERLHAASPVEPGEALSTQSVQNLMAACDTLRESTREFLRLGHRE
QAAEALLEHAQALRILAKHTGDEGKLRHLLDAYSFMQQAVSVQEHVVLNAQSLFPSQECQ
PLSLPATRRLLRVRLALAELSLTMLEQVCAEENRLAMAQDRKASVERTVEEFVRITPDPG
SVEQEWIATGRTLGQVALSQLATVNFLSLDCVETRASSLSLMGKCLRLLAMQRDPLYPFT
LWDGHNLEEDRSESKASPEEEEELTGENGLESSRTEPRQYAAKCAELQRRRRSARQLLAQ
ASETLAQAISLSLQHKLPSSILSEACLNMLECHGQFDPCSTGQYLALLQSCSCTAMMADI
LRSACTDTRVSQLSALLNLHSNLLPSQVETPTSLLKGVEDSLNGFSKTYSHLTINPSHLS
LLGELPSNLKILLLQHTQDRSTLYGAFYERSKLTESQRGKAMQVSGMLICTRVATVAVQP
RALLDLRDRTQAFKRETKHNFLKEAHWLGNEGRAGSERHVHLKSNSEEKLESHFKAIVQE
MEDYLCPILSQFDFSCFGHQTPSISIPECIRPKDKEEKAGLDKGLAVGSPAELGEYVVLL
ADWMLMELPLEALAILQEEGLSSVSRDFSLQLLHTRLQREEPVESDNKKETKGGKGAKGK
VDQSKAIKMVPVNRVLPPNTLPVDTHNFKYVIDPYNEEAYEGSSLTERMKRTLEAYSQQF
TPLWEGFLGSERTPSLAELEQLLTNCSAFIFHGMERFLANIPPSKLAALNLSECQMAVLF
DLVQNSASMLRQSKLDVQKSDGHLALERPLETALLLTLSGVRCVLLNQWHSSPQRNINNM
DFVMENLLRVGLTSGQAVHALRKGEVQSKEKDTNTAGSDDTIGHEDSVNRDGNAHDAQPR
LTTSSSAFNCVIYGLPNLVIT
NT seq
7986 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcacattcgccagtatttgaccaaggcacgtcaacaaaaagacactgatgcg
ctgaatgcagcctatgacatgatcagagaggggtcagatacgcgatgcttctgcccggag
ttgtacgttctgtgcgcagaacaagccctacagctgggatgtgcagatatcagccgagac
tgcctaatgatgtactttgaagggaaacccccagccaatcaattcctgtgtcgagcgtac
ctctgtcagggccagctggagtctccacagagctttgggagtgtggaggagattgaaaag
gctgtgatttattttctgaaggctattgagatttcaaaggtcaaaccaagataccacttt
ttggtgttcaatgcttcagtgctctacttccagatggtccggccgctcctgcggtccggg
ccacgccagcacctggtgcccaccctcactcaggtggtcaaggcactggaggaggttggg
gaacaagactacagttggagagctcagctcatgatgcaccttgtcgaatgccttgtggat
gctgggaaagggaaagaagcttctagttttgccaaggccacctcagacttcatagagtcg
catatccctgacctgtatccaaagatattttccctacaggtacgacacaagctgtttgac
ttcactaaaaccccccaaaaaacagaagcaagtcctgttttatcagtcatctacaaaatg
cagaagctcaaacataaggttgatgacgtttgcgaggccagaaaagaggacgctgccagg
attaaggagattttcctgctccttatgcattctgctgcagcccaatcccctgttatagcg
cgtggctccagcccttgtcttgcagagagcacctcacccatccctccagctgacagagtt
gccttcctcctggagctagcctttctggccttgcagttgaaacatcaccagatggcagcg
gactgtctgagtgagctgaagacaacgggagtcactagtgttggccagtgcatcatgatg
gagtgtgtccagtgtgacctggacctccagaagaagcaggagggggggatgaaggactac
tccaaagccaatgtggaggctcagctgaaggtgataggcagactggacaaggtgctgcag
agtgcagtaagagagggggatgccaaggtgatgcaggcggtgtgtgcctcacagtggaac
acctgtctgcccctccttcagcacaacctcaggagaaatgtcaagggggcgctcctcaaa
gtggcccaagtcctggaggacacatacagtgtgcagctggagatgcgctgtcaggtccac
agtgagctggcagtgatcgaggaggaagaggggaggctggagcccgctctgcttcacctc
cagagggccctgctgctggacgagagaggggtgcaccacgagcggctcacctcagccctt
aacctccttcagcttcgcggcaccctatatcagacccccagcagcacagaggaccaggct
gccatgctcatccaacaggctaagaatggtcagccacaggaggaggtgagaaaaagacgt
cccatgctggtcaacgcaggcctcactctggcccccgacgctttccaggtggtgctcgac
gcagatagcactgcaaaaatcccctcaggcaccagtggacctggcggtgtggctcatctc
tctgctaaggctcagcaccactctgcatgtgttgagaaggtacagggacacctgagcaga
cagggagatggcaagaatgacagggagagggtaaaattgtgggcagccttggcgaagaca
gctaggaagcaggaggtttgggatgtgtgtcgagctgcctgtcgtttctgtttgctctac
gacgatggacgatggaaagctactaaatcagactgtgagcgcaaggcgggggacgagagc
ccagtggagggtggactccatggtgaccggcgtccatcggcagggcgactgtctcagagt
gcggagaaggacctgctccgtctgctggctgaagtctgcttcatcaatgctgaggccacc
atacacaagctccgctctgagggggtacagctcaacaccccagccgcccctcctgaggag
agaggactccgtctccctgaggacaatccacagtgggctgtctacagagattggatccag
gacttatctgcctacgccacctccaacttcctgcggggagccgagctgggagcagagatt
cgtgaggcctgggtggtggtcaacgcagccgtgtacttatggaactacaacagccacctg
gtggcagttggggagcagcgacgcctcctgcccaccttccagagagccgtggagctgctg
agacagaccggacacgctggggagccggtgctgttggttatgctgtgtgatgcggtggcc
caggggctgatccagccctggtttgtgtcggctgctgggccgggaactggccagggaagg
gaggacagcggaagcaggggggagctgaggaagaaagtagccgggaaaggagccgagagg
acaggcagtatccacagcctccccctcgaccatgcggccctccaggacatgcggaaggct
ctggagctgtgtgactatgcactgcacctttctaatggcaatgtgccggtagagagcgtc
cctatcgcagcgaggaaacaggtcatttctacgtgggtgtggaccaagaggctcctccag
cagcagattggacagaagctggacattgatgatgagtgtaagaatgaggcagtgtcagcc
atgacacgtgtgctggtaggagtggaaatgctgttatgcaacagtcaccccaggcagata
gagttctctgtccctagtctctctacgctggtccgcatggcatcagactgcaagtggagt
gaccctgttgtcgagctgcaggtgtggacacacctggcttgcttctctcaccaggcccag
gaccacaacctggtcatgacctgcagccacaatgcactgcagctggaggccgctgcagct
cagaggttgacggtcatggcctatgctctttacagccagtcggccgtgcaggagatgttg
agcaatgctgcatgtctaagaggattgagcatggtccacaagtcaaatggacatcctcac
agttacagagaagccttgcagatgctccagtccagtgtcagctatgcggagcaggcaggt
aactctgtcctgtgtatggctacagcgcgccactactggaacaactgcctgcccttgact
gagacctcactggagagacagcagctccgacagcctctagagaagatcctgaaagccctg
gtccacaccagcaagaaagacccaactcaggggaaagagaagggaggggctaccctgact
gggatgccctctgtgacctcatcgctggaagcctcaagcatggggagccctgaggatgac
ctgaccctgagagcagccatgtacggcctgctgttccacatccacgcagacagctcagat
tggacaggagctctgacgttgctggagcaggctatcagagacatgccccgcaccagacac
aggctgctcctgttcaagcaccgggtgctggtgaaggctcggctgggggagagtgtggta
atagacatgcagaagttccgaggtgaaggggagctctactgctcccacatgtggcaccga
gtggcgctgtgttctggggagatgctacagcagttggcctgctaccagaatgccattact
tctttactgagtgtgaagagtcagtggcagaaggcggatttcctgttggagtttggggag
tggctgtactgtcagaactttcccctttctgatgcccagcaccagatacagtgggctatc
gacatcctcctgcacatgatccctgaccaggaagagagcaatgagaagaccggttccaag
ggaagcaaactgaaagaactggagaggagagaaaattcccaaggagatgagtctggagaa
gggacagggctgataccagtgaaggttcaatcccacgtcggggtgcagggggtggtgtct
gggccctgtatctctgacctcagggaggtgaggcgtctggacagcctggtcagagcacac
actctgctggctgtcatgggggacagggcatccccccagcaccaacataacctacttacg
gcctatagcctagtgctgcagatctggcaggtgtccatggcaactgcatgtcaggtaatc
aaggagatgatgaagaatcctctagtcccaacgtcccggccatgtccctctgcaacagcc
aaaaaagacaaagataaggagaaggacaaaggcaaaaaatctaaagagccaccccctgct
gaggagaagcccaaagcccggaggccacaggatgacgtgttgccctccagcccagaggag
tgggcacagtacgactgtcccggggatgtccgccaggccttcagatatgacaccagcccc
cactgcatcaacagacacagcctcagcaaacagactcagagcttgttcttcctggacctg
ctggtgaaagagctgcagtctctttctctcacccacctgactcttcccatactgcacctg
gctgaggtcattgcccatgacctgctagacagaaggagcctctctgacctctaccgtctc
agaattgtgaggagctgttctcagctggatatggagacgtctacagtgtaccacgagaag
ctcctgagcctgactggtatccatgagcaggaacaaatggagtgtcgcaaagctatagct
ttacaaagagagagaaagcgcctgtatatgggttataatggcaaaacggacaatgagaag
tctaaggttgaccacatctgtctgtctgggaagcagtgtggggatctgtgcagtcaggat
atctggcttgataaggctgagatatgccttggtatgggactgtaccaacccgccagacag
ctactggcagaggcccatctggtggctaaggagctgggagatcaggctgcagcagggagg
agtctgctctctcttgccatcctggccaataaggaacagaaccactctcaggccctggca
ctgctggagaaggcccaagacatgggaggtgatgaggacttctggtacaagctcaccctg
gccctgctgacagctacggtgacccagaggggccaggatatagacaccaagacagatcaa
atagtaaagcaaggctgtggagccttgaaatcgatgctggaaaagaggcataaccgagct
cccgcgctcaggttcctgatcacgtctctggagagcagaggggcggtggaacgtctgcat
gcagccagccctgtcgagccaggtgaggctctgtccacccagtcagtacagaatctcatg
gctgcctgtgacaccctgagagagagcacccgtgagttcctccgactgggccacagagag
caagctgctgaagctctcctggagcacgcacaggcattgaggatactggctaaacacact
ggcgatgagggaaaactgcgccacctgctggatgcctactccttcatgcagcaggccgtc
tctgtacaggaacatgtggttctgaacgcccaaagcctgttcccatcacaagagtgtcag
cccttgtctctcccagccacgaggaggctgttgcgggtcagactggctctggctgagctg
tccttaaccatgctggaacaggtgtgtgctgaggagaacagactagccatggcccaggac
aggaaagcctctgtggagaggaccgtggaggagtttgtacgcattacaccagaccccggc
tctgtagagcaggagtggatagctacaggcaggaccctggggcaggtggctttgagccag
ctggccacggtcaacttcctgtcccttgactgtgtggagaccagagccagctctctgagc
ctgatggggaagtgcctgaggctgctagccatgcagagagacccgctctaccccttcacc
ctctgggatggacacaacctggaggaggaccggtcagagtctaaagccagccctgaggag
gaggaggagttaaccggagagaatggcctagagtcaagcagaacggagcccagacagtac
gcagccaaatgtgctgagttgcagagaagaagacgttctgcccggcagcttctggctcag
gccagtgagactttagcacaggccatcagcctttctctccaacacaaactcccaagctcc
atcctctcagaagcctgtctcaacatgctggagtgtcacggccagtttgacccctgttcc
actggtcaatacctggccttgctccagagctgctcctgcacagctatgatggctgacatt
ctaagatctgcttgcactgacactcgtgtgtcccagctctctgcgctactcaacctacac
agcaacctgctcccttcacaggtggagacccccactagtctgctgaagggagtggaggac
tcactcaatggcttctccaagacctacagccacctgaccatcaacccaagtcacctgagt
cttctgggagagctgccctctaacctgaagatcctgctgcttcagcacacacaagacagg
tcaactctctatggagctttctatgagaggagcaaacttacagagagtcagagagggaag
gccatgcaggtttctggaatgctgatctgtaccagggtcgccacggttgctgtccagccc
agggctctgcttgatctccgggacagaacacaagccttcaaacgcgagaccaaacacaac
ttcttgaaagaggcgcattggcttggcaatgagggcagggcggggagcgagcgtcacgtt
cacctaaaatcgaactctgaagagaaattggaatctcatttcaaagccattgtacaagaa
atggaggactatttgtgtccaatcctctctcagtttgacttctcatgcttcgggcaccag
acgccatcaatatccatcccggagtgcatccggcccaaagacaaggaggagaaagcaggc
ctagataaaggtctagcggtggggtctcctgcagagcttggggagtatgtcgtgctcctg
gctgactggatgctcatggaactacctctggaagcgttggcaatcctgcaagaagagggg
ctgagctctgtatctcgtgacttctcactgcaactcctccacactcgcctgcagagagag
gaaccagttgaaagtgacaacaaaaaggagaccaaaggtggaaagggagccaaggggaag
gtagatcaaagcaaagccatcaaaatggttccggtcaatcgtgtcttgccccccaacacc
ctcccagtagacacacacaacttcaaatatgtcatagacccttacaacgaagaggcatat
gaaggcagcagcctgacagagaggatgaagaggactttggaggcatacagccagcagttc
accccactgtgggagggctttttggggagtgaacgcactcccagtctcgcagagctggag
cagctgctgacaaactgcagtgctttcatcttccatggaatggagcgctttctcgctaac
atcccaccatccaagctggctgccctcaacctttctgagtgccagatggctgtccttttc
gacctcgtccagaacagcgccagcatgctacggcaatccaagctagatgtgcaaaagagt
gatgggcacctggccctggagaggcccctggagacagccctgctactcactctgagtggc
gtccgttgtgttctgctcaaccagtggcacagcagcccccagaggaacataaataacatg
gacttcgtcatggagaatctcctgagggtaggcctgacctctggccaggctgtccatgca
ctgaggaagggagaagtccagagcaaagagaaagacacaaacactgcaggatcagatgat
accataggccacgaggattcggtaaatagagatgggaatgcacatgatgctcaaccaaga
ttgaccacttcatcatcagccttcaattgtgtcatctatggactgcctaacttagttatt
acgtga
DBGET
integrated database retrieval system
