Oncorhynchus mykiss (rainbow trout): 110502421
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Entry
110502421 CDS
T07259
Name
(RefSeq) PDZ domain-containing protein 8-like
KO
K24060
PDZ domain-containing protein 8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110502421
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
110502421
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ_6
C1_1
PDZ
PDZ_2
MMM1
C1_2
Motif
Other DBs
NCBI-GeneID:
110502421
NCBI-ProteinID:
XP_021436122
Ensembl:
ENSOMYG00000030310
LinkDB
All DBs
Position
23:complement(20069197..20136003)
Genome browser
AA seq
1174 aa
AA seq
DB search
MIYLIVISALSGVLITLVLQFLLLYWRSPEPKTGTVQYVKAVPDPALKDYFNNQHAESGQ
QQDIAASAASKQQEAISPRQQEAAVTSSSPKQQPPPHCQSEPLHTSKPETCNFLNAIFLF
LFRELRDTPVVRHWLTKKIKVEFEELLQTKTAGRLLEGLSLRDISLGNSLPVFKTAKLIN
PVRLNEDCMPEELNFEVDLEYNGGFHLAIDVDLVFGKSAYLFVKMTRVVGRLKLQFTRVP
FTHWSFTFLEDPLIDFEVKSQFEGRPLPQLTSIIVNQLKRVIKKKHTLPNYKIRYKPFFP
FQVQPSIGSSACDLDLSVQDSGLAEGRLRVTLVECSRLFILGSYDRETYVHCTFELSSHE
WKEKTRSSIKTAEVIKGPFGSVGMTFRHIPDCEGDAVHVSIETVTPNSPAALADLQRGDR
LIAIGGVKVTSSVQVPKLLKQAGDRVLVLYERPVRYQSTTIGLGALQEGLGQLEEPGFIL
PPGGYEEDPAPIAALADISDSRDMDSEFEESIADPKSNLLSSSAEAKEDFLSVNQSPKRT
VANLASKPLGSISPILNRKLNLAGLQSPVRPPPTPKHSPHKSGEPGEGPQRPTVPPPPPP
TRPLVPPRPHIKLTSASSETQSLLEGSEASTAAERTPEKTPTHSTGSNGDKGSAVTTPVK
QPEPKPAVKPPEPCEEPPGAPSAPSKQELAKDKVSESSIITRDIMEDHSMWESSEIMFRN
RTAHWGNGSVVLAVESNHKYLNTALWCKDPFKLGSLLCLGHVSLTLEHVALECLSSSEYQ
STFRLEAPEPRASVSRTALRSLSTHKGFNEKLCYGDVTLNFSYLADGESETCAGLMEGEK
KASMPDEELREREQLSFVPRDDLADSAIQLVEVRHNFQDTQFQNPTWCEYCKKKVWTKAA
SQCMSCSYVCHKKCQEKCLAEHPFCVAATDRRSADPEAKSTINRATAGLSRHIINTGSRL
LNLRQVPKSRLAEQAADVPDVVHIPDISDNESSDTETYAGASPSKHAAGGSTKLVRREGG
LDDSVFIAVKEIGRDLYRGLPTDERSQKLELMLDKLQQEIDQELENNNALMLEERETGDA
RRKALITAALAKSGERLQALTLLVIHYRAGIEDLESVDSTGTSPSEPHGFKDKGVALEEA
LLGTEVYDSDICSPVEAQLLDDITEEQICVEALH
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgatttacttgatagtaatttccgcattatctggcgtactcattacgttggtattacag
ttcttactgctttactggagaagccccgagccaaaaaccgggacagtgcaatatgtcaaa
gcagtgcctgatcccgccttgaaggattacttcaataaccaacatgccgaatcaggtcaa
caacaagatatcgcagcatctgctgcatccaaacagcaagaggccatctctcccaggcaa
caggaagcagctgtcacaagcagtagccctaaacaacaaccgccaccgcattgtcaaagc
gagccactccacacctccaaaccggagacgtgcaattttctaaacgctatctttttgttc
ctattcagagaactccgcgacactcctgtcgttaggcactggctgaccaaaaagatcaag
gtggagttcgaggagctattacaaaccaagacagctggtcggctgttggagggactcagt
ctcagggatatctccctgggtaattctttgcccgtttttaaaacggccaaacttattaat
ccagtgcgtttaaatgaagactgcatgcccgaggaactcaatttcgaagtggaccttgaa
tataatgggggattccatctagcaattgatgtagaccttgtttttgggaagtcagcctac
ctgttcgtaaagatgacgcgtgtggttggaagactgaagctgcagttcactcgcgtgcct
tttacgcactggtccttcacgttcctcgaggacccattgatagactttgaggtgaagtca
cagttcgagggaaggcccttgcctcagcttacctcaatcattgtcaaccagttgaaaaga
gtcatcaagaagaaacacaccttgccaaattacaaaatcagatacaaacccttcttcccg
ttccaagtgcaaccttccattggatcctccgcctgtgacttggacctctctgttcaggac
tcaggattggctgagggtcggcttagggtcaccctcgttgaatgtagcaggctgtttatc
ctgggctcgtatgacagagagacctacgtgcactgcacctttgagctgagcagccatgag
tggaaagagaagacgcgcagctccatcaaaacggcagaggtgatcaaagggccctttggg
agtgtgggtatgacattcaggcacatccccgactgtgagggtgatgcggtccatgtcagc
atcgagacagtcactcccaactctcctgctgccctggcagacctacagaggggcgatcga
ctcatcgccatcggcggtgtcaaagtgacatcctctgtccaagtgcccaaactgctgaag
caggcaggggacagggtgctggtcctgtatgagaggcctgtgcgttaccagagcaccacc
attggcctgggagccctccaggaggggctgggccagctggaggagcccgggttcatcctc
ccgccggggggctatgaggaggacccggcacccatcgccgccctcgccgacatatccgac
agcagagacatggactctgagtttgaagagtcgattgcagaccccaagtctaacctgctt
agtagcagcgccgaggccaaggaggatttcctgtcagtaaaccaaagtcccaaaaggact
gtggccaatctggcctccaaaccccttggcagcatatcgcccatcctcaaccgcaaactg
aacttggcagggcttcagtcaccggtcagacctccacccacaccaaagcactcaccacac
aagagtggcgagccaggagaggggccacagcgccccactgtcccccctccacccccaccc
actcgcccgctggtgccccctagaccccacattaaattaacgtcagcctcttctgaaaca
caaagtctgttggaggggagcgaagcttccaccgcagctgagagaactccagaaaagact
cctacacactccactggaagcaatggtgacaaaggcagtgctgtgacgacacctgtgaaa
cagcccgaaccaaagccggcggtcaaaccacccgaaccctgcgaagagccaccaggggcc
ccctccgctcccagcaagcaggaactggccaaagacaaggtgtctgagagctccatcatc
acccgagacatcatggaggaccactcaatgtgggagtcctcagagatcatgttccgcaac
cggacggcccattggggcaatggttccgtggtgttagcggtggagagcaaccataagtac
cttaacacggccctgtggtgcaaagaccccttcaagctgggcagcctgctgtgtctgggc
cacgtcagcttgacactggagcatgtggccctggagtgtctgtcctcgtctgagtaccag
agcactttcagactggaagccccagagcccagggccagtgtcagccgcaccgccctgcgc
agccttagcacccacaagggcttcaacgagaagctctgctacggagacgtcacactcaac
ttcagctacctggctgatggagagtcagagacgtgtgctgggctgatggagggtgaaaag
aaggccagcatgccggatgaggagctaagggagagggaacagctttcctttgttccccgt
gacgacctggctgacagtgccatacagctggtggaggtgcgccacaactttcaggacacc
cagttccagaaccccacctggtgcgagtactgcaagaagaaggtgtggaccaaggccgcc
tcccagtgtatgagctgttcctatgtctgccacaagaagtgccaagagaagtgcctggcc
gagcaccctttctgcgtggccgccaccgaccgacgcagtgccgacccggaggccaaatcc
accatcaaccgcgccactgcgggcctcagccgccacatcatcaacaccggctcccgtctg
ctcaatctgcgccaggtgccaaagagccggctggcagagcaagcggctgatgtgccagat
gtggtgcacatccccgacatctctgacaacgagagcagcgatacagaaacctacgctggg
gccagcccctccaagcatgcagccggcggcagcaccaagcttgtacggcgggagggagga
cttgacgacagtgtatttatcgcagtgaaggagatcggccgcgacctttaccggggcctg
cccactgacgagcgctctcagaagctggagctgatgctagacaagctgcagcaagagatc
gaccaggaactggagaacaacaatgccctgatgctggaggagagggagacgggggacgcc
cggaggaaggccctgatcacggccgccctggccaagtctggggagaggctccaggctctc
accctgctcgtgattcactaccgggcaggcatcgaggacctggagtctgtggatagcacc
ggcacctccccctcggagccacatggtttcaaggataagggggtggcattggaggaggcc
ttactggggacagaggtttatgacagtgatatatgcagcccagtggaggcccagctgctg
gatgacatcacagaggagcagatctgtgtggaggcgctccactag
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