Oncorhynchus mykiss (rainbow trout): 110502449
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Entry
110502449 CDS
T07259
Name
(RefSeq) elongation factor 1-alpha, somatic form
KO
K03231
elongation factor 1-alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110502449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110502449
03016 Transfer RNA biogenesis [BR:
omy03016
]
110502449
03012 Translation factors [BR:
omy03012
]
110502449
04131 Membrane trafficking [BR:
omy04131
]
110502449
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110502449
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110502449
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110502449
Translation factors [BR:
omy03012
]
Eukaryotic type
Elongation factors
110502449
Membrane trafficking [BR:
omy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
110502449
Exosome [BR:
omy04147
]
Exosomal proteins
Proteins found in most exosomes
110502449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
110502449
NCBI-ProteinID:
XP_021436147
Ensembl:
ENSOMYG00000039980
LinkDB
All DBs
Position
23:complement(21523734..21528655)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYSPDMVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagcttcacatcaacattgtggtgatcggccacgtggactctggaaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgag
aagtttgagaaggaggctgctgagatggggaagggctcctttaagtacgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcattaccattgacatctcactgtggaagttt
gagaccagcaggtactacgtcaccattatcgatgctcccggacacagggacttcatcaag
aacatgattactggaacctcccaggcggactgtgcagtgctgatcgtggcggctggcgtg
ggggaattcgaggcgggcatctcaaagaacgggcagacccgcgagcacgccctcctagcc
tacaccctgggggtcaagcagctgatcgtgggaatcaataagatggactccactgagccc
aactacagtcagaagcgctatgaggagattgtgaaggaagtcagcacctacatcaagaag
attggctacagcccggatatggtagcctttgttcctatctctggctggaacggagacaac
atgctagaggccagtcctaatatgacctggtttaagggatggaagatcacccggaaggat
ggcagctcgtccgggaccaccctgctggaagctctggatgccatccagcccccgtcccgc
cccaccgacaagcccctccgcctgccccttcaggatgtctacaagattggaggaattggc
acagtgcccgtggggcgtgtggagacgggtatgatcaagccaggcatggtggtgaccttt
gcccctgttaacgtgacaaccgaagtgaagtctgtggagatgcaccacgaggctctgacc
gaagcaatgcccggagacaacgtgggcttcaacgtcaagaacgtgtccgtcaaagatatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagccgtcttc
actgctcaggtgatcatcctgaaccacccaggtcagatcagtgctgggtatgccccggtg
ctggactgccacaccgcccacatcgcttgcaagtttgctgagctcaaggagaagatagac
cgtcgctcaggcaagaaactggaggacaaccccaaggccctgaagtctggggatgccgcc
atcgtggatatggtcccgggaaagcccatgtgtgtggagagcttctctgagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagacagtggcagtcggggtgatcaagggt
gtggagaagaaagctccctccactggcaaggtcaccaagtctgcccagaaggcccagaag
accaaatga
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