Oncorhynchus mykiss (rainbow trout): 110502476
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Entry
110502476 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110502476
Membrane trafficking [BR:
omy04131
]
Endocytosis
Others
Others
110502476
Endosome - Lysosome transport
110502476
Endosome - Golgi transport
110502476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
DUF6085
Motif
Other DBs
NCBI-GeneID:
110502476
NCBI-ProteinID:
XP_021436187
Ensembl:
ENSOMYG00000041211
LinkDB
All DBs
Position
23:24430642..24506556
Genome browser
AA seq
1246 aa
AA seq
DB search
MVISGSVWCWAILTCVLSYFYNMLTAYAEINWPASSTTTNVWLNRVDTLPLELRTNLKSV
WVKIPKYIVKESAFSRAFKMEPIDGKPAVPKGGGRLPKDLKIVIGKVTPGAISSGRDKTA
PNRSKYFTDDRKKSDRFFDVNDNDGTLPLSNRTKRSTAYSEYSDRSQIGGPGDAFSAEKL
FEPFGVYSPRTEYRRTGEDARTGPRQSESLLVTSTFPLSGDSAHNQAMGHWVGDNSSVIL
TLTKQYDFNLGAFTESSLWRSVDYGSTYIKLNNKVGSTLACLYVCPTNKRKIMMLSDPEL
EHSVLISSDEGASFEKHPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVSE
NVTPGRFFWAQTGLDREADMVHMETHIAKGRAQYVTCRAQRCTESNRQYLFPGHIDQNSL
VVQDNYVFVQVTKSGQASYFVSYMRESFKQIQLPKYCLPKDMHIISTDKKQVFAAVQEWN
QNDTYSLYISDSPGVYFTLSLENLRTRREPGGNVLVDMYKVEGINGIFFANKLVDHEVKT
FITYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDMPVNPYLPGRIFSKDSAPGII
VATGNIGTELSSTSLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRHI
WISLDEGKKWDRHSFSLVPLFLDGALMQPENHIITFTGHLSRISEWQLIKIDYKAIFSRR
CMDGDYQTWNLHNKGEPCVMGEKQTFMKRRPGNRCMLTQDYSRVISSEPCICRAYDFECD
YGYERQADGKCSPAFWFDPNTVPRICSTSQNYLNSTGYRKVLSNNCKEGGKDVYSPRKQH
CSPRPPRGLRLTTSHGDLTANLGSNITFLVHLDDGNSLWTHIQLDFGDGITVMYNLSRRG
DGIKHSYRAPGIFRVTAHAENSQGYDSSSIFLHITSPVERVYLSAPIVAIRKKEANLTAV
VWPVHQRTLTFFWWFENSSESLITLGGSIAYTFQKEGMNRVVVQVSSGCNILQDTKVIIV
KEFFKSLLLSFSPTLDEHNPDIPEWREDVGRVVRTAVSQVSGFPEEQLLVSLFPGVPTTA
ELFILPETQFSEHGKGNEEGLVSISDILINALNQGLIQFELKPDTQIIVYITQLTSAPLV
DSNPIHSSSAMLMLLSVAFVGLVAFFIFKFKRKIPWIHVQAEENQEKEPERIGTVRQKNT
MSKIKHSEFPSEKELTEKELETRTRGENGRNGERVITREFPTCTNV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggtcatctcaggttcagtttggtgttgggctattttgacttgcgttttaagctatttt
tacaatatgttgacagcatacgctgaaataaattggccagcgagttccacaacgacgaac
gtttggcttaaccgtgttgatacattgcctttggagctgcgcacaaacctaaaatccgta
tgggtcaaaatcccaaagtatatcgtcaaggaatctgccttttccagggcttttaaaatg
gaaccaattgatggaaaaccggcggttccaaaaggtggagggagattaccaaaggacttg
aaaatagttattgggaaagtgacacctggtgctatatcttctggcagagataaaactgcg
ccaaaccgttccaagtattttactgatgacagaaaaaagtcggaccgtttttttgacgta
aatgacaatgacggcacacttcctttaagtaaccgtacaaagcgaagtacagcctacagc
gaatattcggacaggagtcaaattggaggtcccggtgacgcattttcagccgagaagctt
ttcgagccttttggtgtttatagtccgaggacagaataccgacgaactggggaggacgca
agaactggtccgaggcaaagtgagtcgcttctggtcacctctactttccctctatccgga
gactctgctcacaaccaggcgatggggcactgggttggagacaacagcagcgtgatcctg
accttgacgaagcagtatgactttaacttgggtgctttcactgagagttctctctggaga
tcagtggactatgggagcacttatattaaactgaataataaggttgggtcaaccttggct
tgcctctacgtctgcccaaccaacaagagaaagataatgatgcttagcgacccagagctg
gaacacagtgtactcatcagctcagatgaaggtgccagcttcgagaagcatcccattaac
ttctacatggacggtctgctgtttcatccaacacaggaaaactggctgctggctagcagt
cctgacaacaaggtgtacagcacaatggactttggaagaaaatggcagttggttagtgag
aatgtgactcctggacggttcttctgggcacaaacgggactggacagagaggcagatatg
gtccacatggagacccacattgccaaaggacgtgctcagtatgttacgtgccgagctcaa
cgatgcacagaatcaaacagacagtacctgttcccgggacacatagaccaaaattctctg
gttgttcaggacaactatgtgttcgttcaggttaccaagtcagggcaggcgagttacttt
gtgtcctatatgagggaatcattcaaacaaattcaactacccaaatactgtcttcccaag
gacatgcacatcatcagtacagataagaagcaggtgtttgcggctgtacaggagtggaac
cagaatgacacctacagcctgtatatctcagactctccaggggtctacttcactctgtct
ctagagaacctccggaccagaagagagccaggcggaaatgtactggttgacatgtataag
gtagaaggaataaacggcatattttttgccaacaaattggtggaccatgaagtgaagact
ttcattacctataacaagggtcagacctgggcccttctgcaagcccctaacactgatgtg
gctggaaacagtctgcactgcatcctgccattttgttctctgcatctgcacctggatatg
cctgtgaacccttacctgcctggacgcatcttcagtaaggactcagcaccagggatcatc
gtagccacaggcaacattggtacagagctgtcctccactagccttggaatgtttataaca
tctgatgctggcaatagctggagacagatatttgaagaagaacttggtgtttggtttctt
gacaatggaggtgctttagttgcagtgtctttagttgcaacagtacccatccggcacata
tggataagtctggacgagggtaagaaatgggatcgtcacagtttctctctggttcctttg
tttctggatggagctcttatgcaaccagagaatcacatcatcactttcactggacactta
agtcgtatttcagaatggcagctgataaagattgactacaaagccatctttagcaggaga
tgcatggacggagattatcagacttggaacctacataacaagggagagccatgtgtgatg
ggagaaaagcagacctttatgaaacggaggccagggaaccgctgtatgctgacccaggac
tactcccgagtcatatcctcagaaccatgcatctgcagggcctatgattttgaatgtgat
tatgggtatgaacgtcaagctgatggaaagtgttcacctgctttttggttcgacccaaat
acggtaccaagaatctgtagcactagccagaattacctcaatagcacagggtacaggaag
gttttgtctaataactgcaaagagggaggaaaggatgtgtactcccccaggaaacagcat
tgttcccccaggcctcccagaggcctcagactgaccaccagccatggagacctcaccgcc
aacctgggcagtaacatcaccttcctggtgcatctggacgatggaaactcgttgtggaca
catatccagctagactttggggatggcatcacggtcatgtacaacctgagccggagaggc
gatgggatcaaacacagctatagagcacctgggatcttcagagtgacagcacatgctgag
aacagccagggatatgacagcagctccatattcttacatatcaccagcccagtggagcgt
gtgtatctctcagctcctattgtggccatcaggaagaaggaagccaacctaactgctgtg
gtctggcctgtccaccaaagaacactaacctttttctggtggtttgaaaacagctctgag
tccttaataaccttgggtggaagcatcgcgtacacgtttcagaaggagggcatgaacagg
gtcgttgtccaggtgtcttctggttgcaacatactgcaggataccaaggtcatcattgtt
aaagagttcttcaaatccctgctgttatcattctctccgactttggacgagcacaaccct
gacatccctgagtggagagaggatgtgggccgtgtggtgaggacagctgtgtcacaggtg
tctgggtttccagaagagcagctgttggtatcgttgtttccaggtgttccaacaacagca
gaactatttatcctgcctgagactcagttttctgaacatgggaaagggaatgaagagggc
ttagtgagtatatcagacattcttataaatgccctgaaccaaggattgatccagtttgag
ttgaaacctgacactcaaataattgtttacatcacacagctaacttcagcacctctggtc
gattccaacccaattcacagtagctcagccatgctgatgttgctatctgtggcgtttgtt
ggtttagttgcattcttcatcttcaagttcaaaaggaaaatcccttggatccatgtccag
gctgaggagaaccaggaaaaggagccggagaggatcggcacggttaggcagaaaaacacc
atgtcaaagatcaagcacagtgagttcccctcagagaaggaacttacagagaaagaactg
gagaccaggaccagaggagaaaatggaagaaatggggagagagtgatcacaagagagttt
cctacttgtactaatgtctaa
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