Oncorhynchus mykiss (rainbow trout): 110502477
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Entry
110502477 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110502477
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110502477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
110502477
NCBI-ProteinID:
XP_021436192
Ensembl:
ENSOMYG00000041226
LinkDB
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Position
23:complement(24520546..24630581)
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AA seq
1266 aa
AA seq
DB search
MEATVPGCCSYCYIAMWMWLFTLTSTLDLIKTEIRCIPSCQLPVIKPAPRELSEVVFDPF
GKVPEGEIVGLAEKSPRCHPFNGRCKEVKVAEYLARVSGDGEVISVRKSEQHFANKSDSR
GFEKRQSREKLSSSEELYQHQSGSGIYIPSATLNKVSVNNTRHNKINCFGRENRLKRREL
SKNKVGASFRSRGRRRKRSFQTAESRATWSGFRWNSEDASTPGQHDELKLISSTFALTGD
SAHNQAMVHSSGQNSSVILMLTKYFDFSLGSVTESSLWRSIDYGTTYEKLNEKVGPKTLL
SYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQRYHLAFDILSLLFHPEQEDWILAY
GHDQKLYVSVEFGRRWQLVHESVVPNRFYWSKLGLDQEPGMIHLETSVSDRRSQYITCKL
QNCSEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYRRNAFFPMKLPKYILP
KDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEARGLFFTLALENIVSSGGPEGNIMIDLY
EVAGIKGVFLSNKVVEGQVKTFITYNKGRDWHLLQAPTTDLKGTRIYCVQPYCSLHLHLH
VSDNPYTSGNIVSKESAPGIIVASGTIGPELTAYNVSIFITSDAGNTWREVFEEEYSVLF
LNQGGALVAIRHTPLPIRHIWLSFDEGKRWNKYSFTPSPLYVDGVLGEPGEDTLIMTIFG
HFSHRSEWQLVKIDFKAIFNRRCNTDDYQTWQLHNDGKVCIMGVKRIFHNLKPDTRCVKT
RDQYISQMSDSCPCTEADFECDYGFERQSDGGCTPVFWFVPSSVSTDCTTGDSFLNTTGY
RKALSNNCTAETLGKYSPRSQRCPRQAPRGLQLVTSEGTLTATMGDNVTFLVFLEESDGS
TTSITLDFGDGTAISYANISSIEDGIKHIYSKVGIYRVAATALNSLGSERVLLYLHVTCL
LEQVQLSAPSVVVRNEAVNLSTVLKPRYVGSVTYYWWFNNHTEPVMTLVGGMSFTFSKEG
THTVTVQVSVGNTVLQDKITVAVYEHFKSHVLAFSSNLEAFNPGVPEWRQDISRVVKDSM
VQVTGISGEQLLVSVLPGLPTAAEFCIVPEKRSTEGRMDGKVTHLEQLSLVLLSALNQDL
IQFTLQPGVQINVYATQLSPAPIMDTSESGHNGATVIMLVSVVFVGLAVFVIYKFKRKIP
GINIHTNEREKQQEVIPSVVSIAVPNPEGDMVSTLEHLDIGPDARGIGYLPSHTDVKLSD
ETPHMF
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaccgtacccggctgctgctcttattgttacattgctatgtggatgtggctc
tttaccctaacttccaccctggacttgatcaaaacggagataaggtgcattccatcatgc
caactccccgttatcaagccggctccccgtgaactctctgaagtggtatttgacccgttt
ggaaaagtaccagagggtgaaattgtggggttagcagagaagtcaccacgttgtcacccc
tttaatggcagatgtaaagaagtcaaagttgcggaatatttagcgcgcgtctccggtgat
ggggaggtcatttcagtgcgtaaatccgagcagcactttgcaaataaatcagacagccgt
ggatttgaaaaacgtcagagcagggagaaactttccagttctgaggagctttatcagcat
caaagtggctcgggcatatatattccatctgccaccctcaataaagtatccgtcaataac
actagacataataagattaattgttttggaagagaaaatagacttaaacgacgtgaattg
tcaaaaaacaaggttggagcaagttttaggagccgtggaaggagacgaaagcgtagcttc
cagacggcggagagcagagcaacttggtccggattccgatggaacagtgaagatgcctca
accccggggcaacatgatgagttgaaactcattagttctacgttcgcactcaccggggat
tcagctcataaccaagccatggtgcattcctccggacaaaatagcagtgtgattctaatg
ctgactaagtactttgacttcagccttggcagtgtcacagagagctctctatggaggtca
atagactatggaaccacatatgagaaacttaatgaaaaggtgggaccaaaaacattacta
agctacttgtacgtgagtccgaataacaaacgaaagatcatgttactgaccgacccagag
gtggagagcagcctgctcattagtcttgatgagggcgcatcctatcagaggtaccactta
gccttcgacatcctcagcctcctcttccaccccgagcaggaggactggatcctggcttac
ggccatgaccagaagctgtacgtctctgttgaatttggaagaagatggcagctcgtgcat
gagagtgtagtccccaacagattttactggtcaaaactgggtttggaccaagagccagga
atgattcacttggagaccagtgtttctgatagacggtcccagtatataacgtgtaagctg
cagaactgctcagaggccaacaaaggcaggcctttccctggatttatcagccctgattcc
ctggtcgttcaggaccagtatgttttcattcaggtaccaatgggtggccggcctgtccat
tatgtgtcttacagaagaaatgctttcttcccaatgaagctacctaagtacatattacca
aaggacttgcagataatcagcacagatgataaccaggtggttgcagcagtgcaggactgg
caccagaatgactcatacaacctgtacatgtcagaggcccgaggactcttcttcactctg
gccctggagaacatagtgagcagtgggggaccagagggcaacatcatgatagacctctat
gaggtagcaggaataaaaggggtgttcttgtcaaataaagttgtcgagggccaagtgaaa
acgtttatcacttacaataaggggcgagactggcatcttctacaggctccaaccactgat
ctgaagggaaccagaatctactgtgtacagccctactgttcattacacctgcatctccat
gtgtctgacaacccgtacacgtctggaaacatagtcagtaaggaatcagctccaggaatt
atagtagcttcaggtaccattgggcccgagcttaccgcctataatgtcagcattttcatc
acctcagatgctggcaacacttggagagaggtatttgaggaggagtatagtgtcctcttt
cttaaccagggtggtgccctagtggccattcgacacacacctctccccatcagacatatc
tggctgagttttgatgagggaaaacgctggaacaaatacagcttcaccccctctcctctc
tatgtagacggggtcttaggagagccaggggaagacaccctcatcatgacaatatttggc
catttcagccatcgttctgagtggcagcttgtcaaaatagacttcaaggccatctttaac
agaaggtgtaacacagacgactatcagacctggcagttacacaatgatggtaaagtctgc
attatgggagtgaagagaatctttcataatctgaagcccgacaccagatgtgtcaaaacc
agagatcagtacatctcccagatgtcagactcctgtccatgcaccgaggctgactttgag
tgtgattatggctttgagaggcagagtgatggaggatgcacccctgtcttttggtttgtt
ccatcctccgtgtccacagactgcaccactggggacagcttcctcaacactactggatac
cgtaaggctctatccaataactgcactgcggaaaccctggggaagtatagccctaggagc
cagaggtgtccccgccaggccccgagaggtctgcagctggtcaccagtgaggggacactt
acggccaccatgggggacaacgtcaccttcctggtgtttctggaagagagtgatggctcc
acaacaagtataacattggactttggagacgggacggccatatcctacgctaacatcagc
tccatagaggatggaatcaaacatatatacagtaaagtgggcatttaccgagtggctgcc
acggcactcaacagccttggctctgagagagtcttactatatctacatgttacctgtctc
cttgagcaagtgcagctttcagctccctcggtggttgttaggaatgaagcagtgaatcta
tcaacagtcctgaagccacgttacgttggatcagtcacctactactggtggttcaacaac
cacactgagcctgttatgactttagtgggaggaatgtccttcaccttctcaaaggaggga
acccatactgtcaccgtgcaagtgtcagttggtaacaccgtccttcaagacaaaataact
gttgctgtctatgaacatttcaagtcgcacgttttagccttctcctctaatctggaggcc
ttcaatcctggtgtgcctgaatggaggcaggacatcagtagagtggtcaaggactccatg
gtccaagtcacagggatcagtggagagcagcttctagtgtcagtgctcccagggttgcca
acggcagcagagttttgcatcgtccctgaaaaaaggtcaaccgaggggagaatggatgga
aaagtgacacatttagagcagctctctctagtcctgctaagtgccctgaatcaagacctc
atccagtttactctgcagcctggggttcagattaacgtctatgccacacaactgtctcca
gctcctatcatggacaccagtgagagtggtcacaatggtgctacagtcattatgctagtg
tcagtcgtatttgtgggtttggcagttttcgttatctacaagttcaaaaggaagatccct
ggcatcaacatccacacaaatgagcgagagaaacaacaggaagtgatcccttcggtggtg
tctatagctgtcccaaaccctgagggggacatggtgagcactttggagcacttggacata
gggccagatgcacgtggcataggatacctaccatctcacacagatgtcaaactctcagat
gaaactccccatatgttttaa
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